RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 IFI16Q16666 785 aaKnown RBP14.21□□□□□ -0.13
GARNL3-220ENST00000496711 MEI1Q5TIA1 1274 aa14.21□□□□□ -0.13
GARNL3-220ENST00000496711 INTS8Q75QN2 995 aaKnown RBP14.21□□□□□ -0.13
GARNL3-220ENST00000496711 STK33Q9BYT3 514 aa14.21□□□□□ -0.13
GARNL3-220ENST00000496711 ANKEF1Q9NU02 776 aa14.21□□□□□ -0.13
GARNL3-220ENST00000496711 APEX2Q9UBZ4 518 aa14.21□□□□□ -0.13
GARNL3-220ENST00000496711 DNAJC12Q9UKB3 198 aa14.21□□□□□ -0.13
GARNL3-220ENST00000496711 SSC5DA1L4H1 1573 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 POLR2AP24928 1970 aaKnown RBP14.21□□□□□ -0.14
GARNL3-220ENST00000496711 OTOFQ9HC10 1997 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 TMEM150BA6NC51 233 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 C19orf81C9J6K1 198 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 EVI5O60447 810 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 N4BP1O75113 896 aaKnown RBP14.21□□□□□ -0.14
GARNL3-220ENST00000496711 DSG3P32926 999 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 NCKAP1LP55160 1127 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 SNRPFP62306 86 aaKnown RBP14.21□□□□□ -0.14
GARNL3-220ENST00000496711 GTF2BQ00403 316 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 CFAP221Q4G0U5 840 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 XKR9Q5GH70 373 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 ZNF746Q6NUN9 644 aaPredicted RBP14.21□□□□□ -0.14
GARNL3-220ENST00000496711 HAUS6Q7Z4H7 955 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 NLRX1Q86UT6 975 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 VSIG10LQ86VR7 867 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 SLC17A8Q8NDX2 589 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 IWS1Q96ST2 819 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 ACBD3Q9H3P7 528 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 EHD2Q9NZN4 543 aa14.21□□□□□ -0.14
GARNL3-220ENST00000496711 ZNF214Q9UL59 606 aaPredicted RBP14.21□□□□□ -0.14
GARNL3-220ENST00000496711 A0A0G2JMZ2 1700 aa14.2□□□□□ -0.14
GARNL3-220ENST00000496711 PAPPA2Q9BXP8 1791 aa14.2□□□□□ -0.14
GARNL3-220ENST00000496711 H3BQF6 201 aa14.2□□□□□ -0.14
GARNL3-220ENST00000496711 POLR3GO15318 223 aaPredicted RBP14.2□□□□□ -0.14
GARNL3-220ENST00000496711 NR3C2P08235 984 aa14.2□□□□□ -0.14
GARNL3-220ENST00000496711 DRAP1Q14919 205 aaPredicted RBP14.2□□□□□ -0.14
GARNL3-220ENST00000496711 PLA2G4FQ68DD2 849 aa14.2□□□□□ -0.14
GARNL3-220ENST00000496711 SENP7Q9BQF6 1050 aa14.2□□□□□ -0.14
GARNL3-220ENST00000496711 SH2D3AQ9BRG2 576 aa14.2□□□□□ -0.14
GARNL3-220ENST00000496711 MOV10L1Q9BXT6 1211 aaKnown RBP14.2□□□□□ -0.14
GARNL3-220ENST00000496711 PDE11AQ9HCR9 933 aa14.2□□□□□ -0.14
GARNL3-220ENST00000496711 SMARCAL1Q9NZC9 954 aa14.2□□□□□ -0.14
GARNL3-220ENST00000496711 INTUQ9ULD6 942 aa14.2□□□□□ -0.14
GARNL3-220ENST00000496711 ADAMTS5Q9UNA0 930 aa14.2□□□□□ -0.14
GARNL3-220ENST00000496711 TISP43B9A030 160 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 DDX3XO00571 662 aaKnown RBP eCLIP14.19□□□□□ -0.14
GARNL3-220ENST00000496711 MAPK13O15264 365 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 MAFGO15525 162 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 H2AFZP0C0S5 128 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 CCDC172P0C7W6 258 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 VAMP7P51809 220 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 PEX3P56589 373 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 FAM102BQ5T8I3 360 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 H2AFVQ71UI9 128 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 ZNF771Q7L3S4 317 aaPredicted RBP14.19□□□□□ -0.14
GARNL3-220ENST00000496711 XXYLT1Q8NBI6 393 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 RDH13Q8NBN7 331 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 NSUN6Q8TEA1 469 aaKnown RBP14.19□□□□□ -0.14
GARNL3-220ENST00000496711 INPP4AQ96PE3 977 aaPredicted RBP14.19□□□□□ -0.14
GARNL3-220ENST00000496711 CBWD1Q9BRT8 395 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 PCIF1Q9H4Z3 704 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 VIPAS39Q9H9C1 493 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 GPRC5CQ9NQ84 441 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 HSPBP1Q9NZL4 362 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 PCDHA10Q9Y5I2 948 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 PPP2R3BQ9Y5P8 575 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 EMSYQ7Z589 1322 aa14.19□□□□□ -0.14
GARNL3-220ENST00000496711 A0A0A6YYK5 440 aaPredicted RBP14.18□□□□□ -0.14
GARNL3-220ENST00000496711 LRRIQ3A6PVS8 624 aaPredicted RBP14.18□□□□□ -0.14
GARNL3-220ENST00000496711 ATP2A1O14983 1001 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 SLC16A4O15374 487 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 P4HA2O15460 535 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 LMNB1P20700 586 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 TNNT3P45378 269 aaPredicted RBP14.18□□□□□ -0.14
GARNL3-220ENST00000496711 CETN1Q12798 172 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 PRAMEF18Q5VWM3 479 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 C8orf74Q6P047 294 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 LNX1Q8TBB1 728 aaPredicted RBP14.18□□□□□ -0.14
GARNL3-220ENST00000496711 TRPM4Q8TD43 1214 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 U2AF1L4Q8WU68 220 aaKnown RBP14.18□□□□□ -0.14
GARNL3-220ENST00000496711 HVCN1Q96D96 273 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 LRRC1Q9BTT6 524 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 TEX13BQ9BXU2 312 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 GPR88Q9GZN0 384 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 GGA3Q9NZ52 723 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 TMOD4Q9NZQ9 345 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 FZD1Q9UP38 647 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 EXOC7Q9UPT5 735 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 SIP14410 1827 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 CES2O00748 559 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 DKC1O60832 514 aaKnown RBP eCLIP14.18□□□□□ -0.14
GARNL3-220ENST00000496711 ZMYND10O75800 440 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 MATR3P43243 847 aaKnown RBP eCLIP14.18□□□□□ -0.14
GARNL3-220ENST00000496711 NOP2P46087 812 aaKnown RBP14.18□□□□□ -0.14
GARNL3-220ENST00000496711 DNA2P51530 1060 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 NPEPPSP55786 919 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 DLG4P78352 724 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 TMEM132BQ14DG7 1078 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 NOL9Q5SY16 702 aaKnown RBP14.18□□□□□ -0.14
GARNL3-220ENST00000496711 CCNI2Q6ZMN8 369 aaPredicted RBP14.18□□□□□ -0.14
GARNL3-220ENST00000496711 LRRC57Q8N9N7 239 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms