RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 CELF4Q9BZC1 486 aaKnown RBP9.48□□□□□ -0.89
U2AF1-212ENST00000496462 ATG7O95352 703 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 PRKCBP05771 671 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 RARRES1P49788 294 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 NPEPPSP55786 919 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 SNRPFP62306 86 aaKnown RBP9.48□□□□□ -0.89
U2AF1-212ENST00000496462 FPGSQ05932 587 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 NPY5RQ15761 445 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 EARS2Q5JPH6 523 aaKnown RBP9.48□□□□□ -0.89
U2AF1-212ENST00000496462 ARMCX5Q6P1M9 558 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 LRRC8DQ7L1W4 858 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 MLKLQ8NB16 471 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 DDX12PQ92771 950 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 TMEM143Q96AN5 459 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 VAV3Q9UKW4 847 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 PIN4Q9Y237 131 aaKnown RBP9.48□□□□□ -0.89
U2AF1-212ENST00000496462 PCDHB7Q9Y5E2 793 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 CDK5RAP2Q96SN8 1893 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 BRCA2P51587 3418 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 ADAMTS4O75173 837 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 MED24O75448 989 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 CCNE2O96020 404 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 RPN1P04843 607 aaKnown RBP9.47□□□□□ -0.89
U2AF1-212ENST00000496462 DCAF4L1Q3SXM0 396 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 LRRC71Q8N4P6 559 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 DIS3LQ8TF46 1054 aaKnown RBP9.47□□□□□ -0.89
U2AF1-212ENST00000496462 FAM212AQ96EL1 285 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 PRIMPOLQ96LW4 560 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 MSRAQ9UJ68 235 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 EXOC3O60645 756 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 FGBP02675 491 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 CLCN3P51790 818 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 PTPAQ15257 358 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 CAMK4Q16566 473 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 FKBP15Q5T1M5 1219 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 GLB1LQ6UWU2 654 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 POMGNT1Q8WZA1 660 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 HSD17B14Q9BPX1 270 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 SQORQ9Y6N5 450 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 UBE4BO95155 1302 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 CLDN3O15551 220 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 GNA14O95837 355 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 CA8P35219 290 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 PKP1Q13835 747 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 TCERG1LQ5VWI1 586 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 LMBR1Q8WVP7 490 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 GBP3Q9H0R5 595 aa9.47□□□□□ -0.89
U2AF1-212ENST00000496462 LOC285556D6RIA3 1793 aa9.46□□□□□ -0.89
U2AF1-212ENST00000496462 EML1O00423 815 aa9.46□□□□□ -0.89
U2AF1-212ENST00000496462 TNNC2P02585 160 aa9.46□□□□□ -0.89
U2AF1-212ENST00000496462 MAPTP10636 758 aaKnown RBP9.46□□□□□ -0.89
U2AF1-212ENST00000496462 TRIM60Q495X7 471 aa9.46□□□□□ -0.89
U2AF1-212ENST00000496462 PPP4R3CPQ6ZMV5 832 aa9.46□□□□□ -0.89
U2AF1-212ENST00000496462 TRPV1Q8NER1 839 aa9.46□□□□□ -0.89
U2AF1-212ENST00000496462 PRPF31Q8WWY3 499 aaKnown RBP9.46□□□□□ -0.89
U2AF1-212ENST00000496462 PPP1R16BQ96T49 567 aa9.46□□□□□ -0.89
U2AF1-212ENST00000496462 CHST12Q9NRB3 414 aa9.46□□□□□ -0.89
U2AF1-212ENST00000496462 CDY2AQ9Y6F7 541 aa9.46□□□□□ -0.89
U2AF1-212ENST00000496462 PTPRFP10586 1907 aa9.46□□□□□ -0.89
U2AF1-212ENST00000496462 P4HA1P13674 534 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 KLHL40Q2TBA0 621 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 CT47A1Q5JQC4 288 aaPredicted RBP9.46□□□□□ -0.9
U2AF1-212ENST00000496462 HAUS6Q7Z4H7 955 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 SPIRE2Q8WWL2 714 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 CLSTN2Q9H4D0 955 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 RPF1Q9H9Y2 349 aaKnown RBP9.46□□□□□ -0.9
U2AF1-212ENST00000496462 PUF60Q9UHX1 559 aaKnown RBP9.46□□□□□ -0.9
U2AF1-212ENST00000496462 PP2D1A8MPX8 630 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 PITPNM1O00562 1244 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 MTIF2P46199 727 aaKnown RBP9.46□□□□□ -0.9
U2AF1-212ENST00000496462 NDUFA8P51970 172 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 TRPC3Q13507 836 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 ZNF568Q3ZCX4 644 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 PRPF38BQ5VTL8 546 aaKnown RBP9.46□□□□□ -0.9
U2AF1-212ENST00000496462 RINT1Q6NUQ1 792 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 DEFB128Q7Z7B8 93 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 SESTD1Q86VW0 696 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 GJA10Q969M2 543 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 LENG9Q96B70 501 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 C7orf25Q9BPX7 421 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 MRPL9Q9BYD2 267 aaKnown RBP9.46□□□□□ -0.9
U2AF1-212ENST00000496462 UBE2OQ9C0C9 1292 aaKnown RBP9.46□□□□□ -0.9
U2AF1-212ENST00000496462 METTL14Q9HCE5 456 aaKnown RBP9.46□□□□□ -0.9
U2AF1-212ENST00000496462 KANSL3Q9P2N6 904 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 ANKFY1Q9P2R3 1169 aa9.46□□□□□ -0.9
U2AF1-212ENST00000496462 ZMYND8Q9ULU4 1186 aaPredicted RBP9.46□□□□□ -0.9
U2AF1-212ENST00000496462 DHX15O43143 795 aaKnown RBP9.45□□□□□ -0.9
U2AF1-212ENST00000496462 ITGA4P13612 1032 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 EIF4BP23588 611 aaKnown RBP9.45□□□□□ -0.9
U2AF1-212ENST00000496462 LAMTOR4Q0VGL1 99 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 SHISA4Q96DD7 197 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 TBC1D7Q9P0N9 293 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 CBFA2T2O43439 604 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 RGS20O76081 388 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 SP2Q02086 613 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 GRB10Q13322 594 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 TMEM119Q4V9L6 283 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 HYIQ5T013 277 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 FGD4Q96M96 766 aa9.45□□□□□ -0.9
U2AF1-212ENST00000496462 CRISPLD2Q9H0B8 497 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms