RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 C2orf78A6NCI8 922 aa8.03□□□□□ -1.12
SF3B1-212ENST00000496458 KDM1AO60341 852 aa8.03□□□□□ -1.12
SF3B1-212ENST00000496458 RAD17O75943 681 aa8.03□□□□□ -1.12
SF3B1-212ENST00000496458 SELENOPP49908 381 aa8.03□□□□□ -1.12
SF3B1-212ENST00000496458 CT47A1Q5JQC4 288 aaPredicted RBP8.03□□□□□ -1.12
SF3B1-212ENST00000496458 PALM2Q8IXS6 379 aa8.03□□□□□ -1.12
SF3B1-212ENST00000496458 GPR135Q8IZ08 494 aa8.03□□□□□ -1.12
SF3B1-212ENST00000496458 SHCBP1Q8NEM2 672 aa8.03□□□□□ -1.12
SF3B1-212ENST00000496458 KRTAP4-9Q9BYQ8 210 aa8.03□□□□□ -1.12
SF3B1-212ENST00000496458 MYPNQ86TC9 1320 aa8.03□□□□□ -1.12
SF3B1-212ENST00000496458 HNRNPLP14866 589 aaKnown RBP eCLIP8.02□□□□□ -1.13
SF3B1-212ENST00000496458 RPS19P39019 145 aaKnown RBP8.02□□□□□ -1.13
SF3B1-212ENST00000496458 TCIRG1Q13488 830 aa8.02□□□□□ -1.13
SF3B1-212ENST00000496458 FRMD7Q6ZUT3 714 aa8.02□□□□□ -1.13
SF3B1-212ENST00000496458 HDGFL2Q7Z4V5 671 aaPredicted RBP8.02□□□□□ -1.13
SF3B1-212ENST00000496458 CXorf67Q86X51 503 aaPredicted RBP8.02□□□□□ -1.13
SF3B1-212ENST00000496458 HIST1H2AHQ96KK5 128 aa8.02□□□□□ -1.13
SF3B1-212ENST00000496458 HIST1H2AJQ99878 128 aa8.02□□□□□ -1.13
SF3B1-212ENST00000496458 KRTAP9-3Q9BYQ3 159 aa8.02□□□□□ -1.13
SF3B1-212ENST00000496458 SLC30A1Q9Y6M5 507 aa8.02□□□□□ -1.13
SF3B1-212ENST00000496458 COMTP21964 271 aa8.01□□□□□ -1.13
SF3B1-212ENST00000496458 ADCY7P51828 1080 aa8.01□□□□□ -1.13
SF3B1-212ENST00000496458 BPIFB4P59827 614 aa8.01□□□□□ -1.13
SF3B1-212ENST00000496458 RIN1Q13671 783 aa8.01□□□□□ -1.13
SF3B1-212ENST00000496458 HS1BP3Q53T59 392 aa8.01□□□□□ -1.13
SF3B1-212ENST00000496458 CLEC14AQ86T13 490 aa8.01□□□□□ -1.13
SF3B1-212ENST00000496458 ANKRD53Q8N9V6 530 aa8.01□□□□□ -1.13
SF3B1-212ENST00000496458 RPL10LQ96L21 214 aaKnown RBP8.01□□□□□ -1.13
SF3B1-212ENST00000496458 SLC6A15Q9H2J7 730 aa8.01□□□□□ -1.13
SF3B1-212ENST00000496458 AGO3Q9H9G7 860 aaKnown RBP8.01□□□□□ -1.13
SF3B1-212ENST00000496458 MSL2Q9HCI7 577 aa8.01□□□□□ -1.13
SF3B1-212ENST00000496458 USP18Q9UMW8 372 aa8.01□□□□□ -1.13
SF3B1-212ENST00000496458 JAG2Q9Y219 1238 aa8.01□□□□□ -1.13
SF3B1-212ENST00000496458 APOBEC2Q9Y235 224 aaKnown RBP8.01□□□□□ -1.13
SF3B1-212ENST00000496458 NOC2LQ9Y3T9 749 aaKnown RBP8.01□□□□□ -1.13
SF3B1-212ENST00000496458 PCDHB6Q9Y5E3 794 aa8.01□□□□□ -1.13
SF3B1-212ENST00000496458 PPP2R3BQ9Y5P8 575 aa8.01□□□□□ -1.13
SF3B1-212ENST00000496458 A0A0A6YYK5 440 aaPredicted RBP8□□□□□ -1.13
SF3B1-212ENST00000496458 PRSS38A1L453 326 aa8□□□□□ -1.13
SF3B1-212ENST00000496458 ZEB2O60315 1214 aa8□□□□□ -1.13
SF3B1-212ENST00000496458 CLEC2LP0C7M8 214 aa8□□□□□ -1.13
SF3B1-212ENST00000496458 SAFB2Q14151 953 aaKnown RBP eCLIP8□□□□□ -1.13
SF3B1-212ENST00000496458 CDSNQ15517 529 aa8□□□□□ -1.13
SF3B1-212ENST00000496458 EGFLAMQ63HQ2 1017 aa8□□□□□ -1.13
SF3B1-212ENST00000496458 POLNQ7Z5Q5 900 aa8□□□□□ -1.13
SF3B1-212ENST00000496458 PLA2G15Q8NCC3 412 aa8□□□□□ -1.13
SF3B1-212ENST00000496458 RABGGTAQ92696 567 aa8□□□□□ -1.13
SF3B1-212ENST00000496458 TMEM176AQ96HP8 235 aa8□□□□□ -1.13
SF3B1-212ENST00000496458 SOX7Q9BT81 388 aa8□□□□□ -1.13
SF3B1-212ENST00000496458 ANO3Q9BYT9 981 aa8□□□□□ -1.13
SF3B1-212ENST00000496458 A0A1W2PRX2 142 aa7.99□□□□□ -1.13
SF3B1-212ENST00000496458 MUSKO15146 869 aa7.99□□□□□ -1.13
SF3B1-212ENST00000496458 DAPK3O43293 454 aa7.99□□□□□ -1.13
SF3B1-212ENST00000496458 PFKMP08237 780 aa7.99□□□□□ -1.13
SF3B1-212ENST00000496458 INSRRP14616 1297 aa7.99□□□□□ -1.13
SF3B1-212ENST00000496458 CNGA1P29973 690 aa7.99□□□□□ -1.13
SF3B1-212ENST00000496458 MSX2P35548 267 aaPredicted RBP7.99□□□□□ -1.13
SF3B1-212ENST00000496458 MANFP55145 182 aaKnown RBP7.99□□□□□ -1.13
SF3B1-212ENST00000496458 GRM7Q14831 915 aa7.99□□□□□ -1.13
SF3B1-212ENST00000496458 RASSF3Q86WH2 238 aa7.99□□□□□ -1.13
SF3B1-212ENST00000496458 AFAP1L2Q8N4X5 818 aa7.99□□□□□ -1.13
SF3B1-212ENST00000496458 CDYL2Q8N8U2 506 aa7.99□□□□□ -1.13
SF3B1-212ENST00000496458 BORCS6Q96GS4 357 aa7.99□□□□□ -1.13
SF3B1-212ENST00000496458 ADOQ96SZ5 270 aa7.99□□□□□ -1.13
SF3B1-212ENST00000496458 CDK5RAP1Q96SZ6 601 aaKnown RBP7.99□□□□□ -1.13
SF3B1-212ENST00000496458 NELFAQ9H3P2 528 aa7.99□□□□□ -1.13
SF3B1-212ENST00000496458 PLA2G3Q9NZ20 509 aa7.99□□□□□ -1.13
SF3B1-212ENST00000496458 TSC22D4Q9Y3Q8 395 aa7.99□□□□□ -1.13
SF3B1-212ENST00000496458 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.98□□□□□ -1.13
SF3B1-212ENST00000496458 PMS2P1A4D2B8 440 aa7.98□□□□□ -1.13
SF3B1-212ENST00000496458 GOLGA8BA8MQT2 603 aa7.98□□□□□ -1.13
SF3B1-212ENST00000496458 ULK1O75385 1050 aa7.98□□□□□ -1.13
SF3B1-212ENST00000496458 TOX4O94842 621 aa7.98□□□□□ -1.13
SF3B1-212ENST00000496458 ADAM8P78325 824 aa7.98□□□□□ -1.13
SF3B1-212ENST00000496458 FOXL1Q12952 345 aa7.98□□□□□ -1.13
SF3B1-212ENST00000496458 KRT40Q6A162 431 aa7.98□□□□□ -1.13
SF3B1-212ENST00000496458 CCDC62Q6P9F0 684 aa7.98□□□□□ -1.13
SF3B1-212ENST00000496458 CLRN3Q8NCR9 226 aa7.98□□□□□ -1.13
SF3B1-212ENST00000496458 GPHA2Q96T91 129 aa7.98□□□□□ -1.13
SF3B1-212ENST00000496458 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.98□□□□□ -1.13
SF3B1-212ENST00000496458 ACO1P21399 889 aaKnown RBP7.97□□□□□ -1.13
SF3B1-212ENST00000496458 PPARAQ07869 468 aa7.97□□□□□ -1.13
SF3B1-212ENST00000496458 R3HDM1Q15032 1099 aaKnown RBP7.97□□□□□ -1.13
SF3B1-212ENST00000496458 MAN2A1Q16706 1144 aa7.97□□□□□ -1.13
SF3B1-212ENST00000496458 ZXDCQ2QGD7 858 aaPredicted RBP7.97□□□□□ -1.13
SF3B1-212ENST00000496458 DBX2Q6ZNG2 339 aa7.97□□□□□ -1.13
SF3B1-212ENST00000496458 GGNQ86UU5 652 aa7.97□□□□□ -1.13
SF3B1-212ENST00000496458 GAB3Q8WWW8 586 aa7.97□□□□□ -1.13
SF3B1-212ENST00000496458 UIMC1Q96RL1 719 aa7.97□□□□□ -1.13
SF3B1-212ENST00000496458 OSBPL6Q9BZF3 934 aa7.97□□□□□ -1.13
SF3B1-212ENST00000496458 C14orf93Q9H972 538 aaKnown RBP7.97□□□□□ -1.13
SF3B1-212ENST00000496458 TOPORSQ9NS56 1045 aaPredicted RBP7.97□□□□□ -1.13
SF3B1-212ENST00000496458 KCNG1Q9UIX4 513 aa7.97□□□□□ -1.13
SF3B1-212ENST00000496458 PRKAB1Q9Y478 270 aa7.97□□□□□ -1.13
SF3B1-212ENST00000496458 BRINP1O60477 761 aa7.96□□□□□ -1.14
SF3B1-212ENST00000496458 FSBPO95073 299 aa7.96□□□□□ -1.14
SF3B1-212ENST00000496458 VIL1P09327 827 aaKnown RBP7.96□□□□□ -1.14
SF3B1-212ENST00000496458 VSIG10L2P0DP72 767 aa7.96□□□□□ -1.14
SF3B1-212ENST00000496458 SESN3P58005 492 aa7.96□□□□□ -1.14
SF3B1-212ENST00000496458 PUM1Q14671 1186 aaKnown RBP eCLIP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms