RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 SMRP1Q8NCR6 262 aa16.15■□□□□ 0.18
CXCL12-208ENST00000496375 ETNPPLQ8TBG4 499 aa16.15■□□□□ 0.18
CXCL12-208ENST00000496375 SH2D3AQ9BRG2 576 aa16.15■□□□□ 0.18
CXCL12-208ENST00000496375 NIFKQ9BYG3 293 aaKnown RBP16.15■□□□□ 0.18
CXCL12-208ENST00000496375 DDX25Q9UHL0 483 aaKnown RBP16.15■□□□□ 0.18
CXCL12-208ENST00000496375 KCNJ14Q9UNX9 436 aa16.15■□□□□ 0.18
CXCL12-208ENST00000496375 FSCN2O14926 492 aa16.14■□□□□ 0.17
CXCL12-208ENST00000496375 CSDE1O75534 798 aaKnown RBP16.14■□□□□ 0.17
CXCL12-208ENST00000496375 PLCB3Q01970 1234 aa16.14■□□□□ 0.17
CXCL12-208ENST00000496375 DUSP6Q16828 381 aa16.14■□□□□ 0.17
CXCL12-208ENST00000496375 INF2Q27J81 1249 aa16.14■□□□□ 0.17
CXCL12-208ENST00000496375 PLPP4Q5VZY2 271 aa16.14■□□□□ 0.17
CXCL12-208ENST00000496375 PDE12Q6L8Q7 609 aaKnown RBP16.14■□□□□ 0.17
CXCL12-208ENST00000496375 KRT25Q7Z3Z0 450 aa16.14■□□□□ 0.17
CXCL12-208ENST00000496375 LRRC43Q8N309 656 aa16.14■□□□□ 0.17
CXCL12-208ENST00000496375 MRPS27Q92552 414 aaKnown RBP16.14■□□□□ 0.17
CXCL12-208ENST00000496375 CEP89Q96ST8 783 aa16.14■□□□□ 0.17
CXCL12-208ENST00000496375 CDCA3Q99618 268 aaPredicted RBP16.14■□□□□ 0.17
CXCL12-208ENST00000496375 LZTS1Q9Y250 596 aa16.14■□□□□ 0.17
CXCL12-208ENST00000496375 A0A0U1RQF3 1178 aa16.13■□□□□ 0.17
CXCL12-208ENST00000496375 DDX11L8A8MPP1 907 aa16.13■□□□□ 0.17
CXCL12-208ENST00000496375 SLC37A4O43826 429 aa16.13■□□□□ 0.17
CXCL12-208ENST00000496375 PBX3P40426 434 aa16.13■□□□□ 0.17
CXCL12-208ENST00000496375 RBM10P98175 930 aaKnown RBP16.13■□□□□ 0.17
CXCL12-208ENST00000496375 CUL4AQ13619 759 aa16.13■□□□□ 0.17
CXCL12-208ENST00000496375 LETM2Q2VYF4 491 aa16.13■□□□□ 0.17
CXCL12-208ENST00000496375 CLLU1OSQ5K130 101 aa16.13■□□□□ 0.17
CXCL12-208ENST00000496375 KCNT2Q6UVM3 1135 aa16.13■□□□□ 0.17
CXCL12-208ENST00000496375 ZNF598Q86UK7 904 aaKnown RBP16.13■□□□□ 0.17
CXCL12-208ENST00000496375 RNF135Q8IUD6 432 aa16.13■□□□□ 0.17
CXCL12-208ENST00000496375 SNX21Q969T3 373 aa16.13■□□□□ 0.17
CXCL12-208ENST00000496375 ZNF558Q96NG5 402 aa16.13■□□□□ 0.17
CXCL12-208ENST00000496375 GCOM2Q9BZD3 368 aaPredicted RBP16.13■□□□□ 0.17
CXCL12-208ENST00000496375 TSHZ2Q9NRE2 1034 aa16.13■□□□□ 0.17
CXCL12-208ENST00000496375 DACT1Q9NYF0 836 aa16.13■□□□□ 0.17
CXCL12-208ENST00000496375 PUF60Q9UHX1 559 aaKnown RBP16.13■□□□□ 0.17
CXCL12-208ENST00000496375 MUTYHQ9UIF7 546 aa16.13■□□□□ 0.17
CXCL12-208ENST00000496375 USP15Q9Y4E8 981 aaPredicted RBP16.13■□□□□ 0.17
CXCL12-208ENST00000496375 A0A087WZ62 844 aa16.12■□□□□ 0.17
CXCL12-208ENST00000496375 IGKV6-21A0A0C4DH24 114 aa16.12■□□□□ 0.17
CXCL12-208ENST00000496375 CCDC194A0A1B0GVG4 234 aa16.12■□□□□ 0.17
CXCL12-208ENST00000496375 FSD2A1L4K1 749 aa16.12■□□□□ 0.17
CXCL12-208ENST00000496375 ATF7P17544 494 aaPredicted RBP16.12■□□□□ 0.17
CXCL12-208ENST00000496375 PPM1AP35813 382 aa16.12■□□□□ 0.17
CXCL12-208ENST00000496375 DNM2P50570 870 aa16.12■□□□□ 0.17
CXCL12-208ENST00000496375 CDC42EP1Q00587 391 aa16.12■□□□□ 0.17
CXCL12-208ENST00000496375 PLA2G4FQ68DD2 849 aa16.12■□□□□ 0.17
CXCL12-208ENST00000496375 VN1R2Q8NFZ6 395 aa16.12■□□□□ 0.17
CXCL12-208ENST00000496375 HELQQ8TDG4 1101 aa16.12■□□□□ 0.17
CXCL12-208ENST00000496375 TNFRSF25Q93038 417 aa16.12■□□□□ 0.17
CXCL12-208ENST00000496375 TCF25Q9BQ70 676 aa16.12■□□□□ 0.17
CXCL12-208ENST00000496375 FDXACB1Q9BRP7 624 aaPredicted RBP16.12■□□□□ 0.17
CXCL12-208ENST00000496375 ENTPD7Q9NQZ7 604 aa16.12■□□□□ 0.17
CXCL12-208ENST00000496375 GJB4Q9NTQ9 266 aa16.12■□□□□ 0.17
CXCL12-208ENST00000496375 SUCLA2Q9P2R7 463 aaPredicted RBP16.12■□□□□ 0.17
CXCL12-208ENST00000496375 EML1O00423 815 aa16.11■□□□□ 0.17
CXCL12-208ENST00000496375 DTNBO60941 627 aa16.11■□□□□ 0.17
CXCL12-208ENST00000496375 MAFO75444 373 aaPredicted RBP16.11■□□□□ 0.17
CXCL12-208ENST00000496375 EOMESO95936 686 aa16.11■□□□□ 0.17
CXCL12-208ENST00000496375 PSMC5P62195 406 aa16.11■□□□□ 0.17
CXCL12-208ENST00000496375 KRT17Q04695 432 aa16.11■□□□□ 0.17
CXCL12-208ENST00000496375 HERC4Q5GLZ8 1057 aaPredicted RBP16.11■□□□□ 0.17
CXCL12-208ENST00000496375 ANO5Q75V66 913 aa16.11■□□□□ 0.17
CXCL12-208ENST00000496375 NEK8Q86SG6 692 aa16.11■□□□□ 0.17
CXCL12-208ENST00000496375 RHPN2Q8IUC4 686 aa16.11■□□□□ 0.17
CXCL12-208ENST00000496375 NGRNQ9NPE2 291 aaKnown RBP16.11■□□□□ 0.17
CXCL12-208ENST00000496375 CHST12Q9NRB3 414 aa16.11■□□□□ 0.17
CXCL12-208ENST00000496375 SPG21Q9NZD8 308 aa16.11■□□□□ 0.17
CXCL12-208ENST00000496375 HIDE1A8MVS5 230 aa16.1■□□□□ 0.17
CXCL12-208ENST00000496375 LOC730098B7Z3J9 87 aa16.1■□□□□ 0.17
CXCL12-208ENST00000496375 SRGAP2BP0DMP2 458 aa16.1■□□□□ 0.17
CXCL12-208ENST00000496375 SFPQP23246 707 aaKnown RBP eCLIP16.1■□□□□ 0.17
CXCL12-208ENST00000496375 QARSP47897 775 aaKnown RBP16.1■□□□□ 0.17
CXCL12-208ENST00000496375 PPP2R5CQ13362 524 aa16.1■□□□□ 0.17
CXCL12-208ENST00000496375 TMC7Q7Z402 723 aa16.1■□□□□ 0.17
CXCL12-208ENST00000496375 ZNF410Q86VK4 478 aa16.1■□□□□ 0.17
CXCL12-208ENST00000496375 KSR1Q8IVT5 923 aa16.1■□□□□ 0.17
CXCL12-208ENST00000496375 SLC39A11Q8N1S5 342 aa16.1■□□□□ 0.17
CXCL12-208ENST00000496375 FBXO18Q8NFZ0 1043 aa16.1■□□□□ 0.17
CXCL12-208ENST00000496375 FAM20AQ96MK3 541 aa16.1■□□□□ 0.17
CXCL12-208ENST00000496375 NLRP4Q96MN2 994 aa16.1■□□□□ 0.17
CXCL12-208ENST00000496375 JPH2Q9BR39 696 aaPredicted RBP16.1■□□□□ 0.17
CXCL12-208ENST00000496375 PHF7Q9BWX1 381 aaPredicted RBP16.1■□□□□ 0.17
CXCL12-208ENST00000496375 MRPL9Q9BYD2 267 aaKnown RBP16.1■□□□□ 0.17
CXCL12-208ENST00000496375 INO80BQ9C086 356 aaPredicted RBP16.1■□□□□ 0.17
CXCL12-208ENST00000496375 KCNMB3Q9NPA1 279 aa16.1■□□□□ 0.17
CXCL12-208ENST00000496375 VAV3Q9UKW4 847 aa16.1■□□□□ 0.17
CXCL12-208ENST00000496375 PIN4Q9Y237 131 aaKnown RBP16.1■□□□□ 0.17
CXCL12-208ENST00000496375 MUC6Q6W4X9 2439 aa16.1■□□□□ 0.17
CXCL12-208ENST00000496375 WDFY4Q6ZS81 3184 aa16.1■□□□□ 0.17
CXCL12-208ENST00000496375 CCNT1O60563 726 aaKnown RBP16.09■□□□□ 0.17
CXCL12-208ENST00000496375 GCFC2P16383 781 aaKnown RBP16.09■□□□□ 0.17
CXCL12-208ENST00000496375 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-208ENST00000496375 TECP42680 631 aa16.09■□□□□ 0.17
CXCL12-208ENST00000496375 PHKA2P46019 1235 aa16.09■□□□□ 0.17
CXCL12-208ENST00000496375 NPEPPSP55786 919 aa16.09■□□□□ 0.17
CXCL12-208ENST00000496375 KCNC3Q14003 757 aa16.09■□□□□ 0.17
CXCL12-208ENST00000496375 TWF2Q6IBS0 349 aaKnown RBP16.09■□□□□ 0.17
CXCL12-208ENST00000496375 PPP4R3AQ6IN85 833 aa16.09■□□□□ 0.17
CXCL12-208ENST00000496375 LLGL2Q6P1M3 1020 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms