RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 LEO1Q8WVC0 666 aaPredicted RBP5.24□□□□□ -1.57
CLK1-214ENST00000496205 KLHL42Q9P2K6 505 aa5.24□□□□□ -1.57
CLK1-214ENST00000496205 CBLCQ9ULV8 474 aa5.24□□□□□ -1.57
CLK1-214ENST00000496205 MAPRE3Q9UPY8 281 aa5.24□□□□□ -1.57
CLK1-214ENST00000496205 ATP8A1Q9Y2Q0 1164 aa5.24□□□□□ -1.57
CLK1-214ENST00000496205 PRAMEF25A6NGN4 478 aa5.23□□□□□ -1.57
CLK1-214ENST00000496205 ARVCFO00192 962 aa5.23□□□□□ -1.57
CLK1-214ENST00000496205 EFCAB14O75071 495 aa5.23□□□□□ -1.57
CLK1-214ENST00000496205 GLRX3O76003 335 aaKnown RBP5.23□□□□□ -1.57
CLK1-214ENST00000496205 EYA4O95677 639 aa5.23□□□□□ -1.57
CLK1-214ENST00000496205 POU3F2P20265 443 aaPredicted RBP5.23□□□□□ -1.57
CLK1-214ENST00000496205 IGFALSP35858 605 aa5.23□□□□□ -1.57
CLK1-214ENST00000496205 GUCY1A3Q02108 690 aa5.23□□□□□ -1.57
CLK1-214ENST00000496205 PAK1Q13153 545 aa5.23□□□□□ -1.57
CLK1-214ENST00000496205 CCDC142Q17RM4 750 aa5.23□□□□□ -1.57
CLK1-214ENST00000496205 TAF7LQ5H9L4 462 aa5.23□□□□□ -1.57
CLK1-214ENST00000496205 FIGNQ5HY92 759 aa5.23□□□□□ -1.57
CLK1-214ENST00000496205 MPHOSPH9Q99550 1183 aa5.23□□□□□ -1.57
CLK1-214ENST00000496205 OR10A5Q9H207 317 aa5.23□□□□□ -1.57
CLK1-214ENST00000496205 CATSPERZQ9NTU4 200 aa5.23□□□□□ -1.57
CLK1-214ENST00000496205 DDX56Q9NY93 547 aaKnown RBP5.23□□□□□ -1.57
CLK1-214ENST00000496205 TMEM191CA6NGB0 347 aa5.22□□□□□ -1.57
CLK1-214ENST00000496205 ASLP04424 464 aa5.22□□□□□ -1.57
CLK1-214ENST00000496205 JMJD7P0C870 316 aa5.22□□□□□ -1.57
CLK1-214ENST00000496205 CDK11BP21127 795 aaKnown RBP5.22□□□□□ -1.57
CLK1-214ENST00000496205 IBSPP21815 317 aaPredicted RBP5.22□□□□□ -1.57
CLK1-214ENST00000496205 HERVK_113P62684 666 aa5.22□□□□□ -1.57
CLK1-214ENST00000496205 TOB2Q14106 344 aaPredicted RBP5.22□□□□□ -1.57
CLK1-214ENST00000496205 PLEKHG6Q3KR16 790 aa5.22□□□□□ -1.57
CLK1-214ENST00000496205 LRCH2Q5VUJ6 765 aa5.22□□□□□ -1.57
CLK1-214ENST00000496205 MBNL2Q5VZF2 373 aaKnown RBP5.22□□□□□ -1.57
CLK1-214ENST00000496205 CDCA2Q69YH5 1023 aaPredicted RBP5.22□□□□□ -1.57
CLK1-214ENST00000496205 ZCCHC8Q6NZY4 707 aaKnown RBP5.22□□□□□ -1.57
CLK1-214ENST00000496205 MRGPREQ86SM8 312 aa5.22□□□□□ -1.57
CLK1-214ENST00000496205 BCL6BQ8N143 479 aaPredicted RBP5.22□□□□□ -1.57
CLK1-214ENST00000496205 FBXW5Q969U6 566 aa5.22□□□□□ -1.57
CLK1-214ENST00000496205 NAF1Q96HR8 494 aaKnown RBP5.22□□□□□ -1.57
CLK1-214ENST00000496205 MAGEB10Q96LZ2 347 aaPredicted RBP5.22□□□□□ -1.57
CLK1-214ENST00000496205 NRDE2Q9H7Z3 1164 aa5.22□□□□□ -1.57
CLK1-214ENST00000496205 COQ6Q9Y2Z9 468 aa5.22□□□□□ -1.57
CLK1-214ENST00000496205 ZNF891A8MT65 544 aaPredicted RBP5.21□□□□□ -1.58
CLK1-214ENST00000496205 ZNF561-AS1K7EIQ3 104 aa5.21□□□□□ -1.58
CLK1-214ENST00000496205 AQP7O14520 342 aa5.21□□□□□ -1.58
CLK1-214ENST00000496205 MMEP08473 750 aa5.21□□□□□ -1.58
CLK1-214ENST00000496205 FBLP22087 321 aaKnown RBP5.21□□□□□ -1.58
CLK1-214ENST00000496205 SOX5P35711 763 aa5.21□□□□□ -1.58
CLK1-214ENST00000496205 ID4P47928 161 aa5.21□□□□□ -1.58
CLK1-214ENST00000496205 ADAM15Q13444 863 aa5.21□□□□□ -1.58
CLK1-214ENST00000496205 FAM50AQ14320 339 aaKnown RBP5.21□□□□□ -1.58
CLK1-214ENST00000496205 PIK3R6Q5UE93 754 aa5.21□□□□□ -1.58
CLK1-214ENST00000496205 GRAMD4Q6IC98 578 aa5.21□□□□□ -1.58
CLK1-214ENST00000496205 FSTL4Q6MZW2 842 aa5.21□□□□□ -1.58
CLK1-214ENST00000496205 MTDHQ86UE4 582 aaKnown RBP5.21□□□□□ -1.58
CLK1-214ENST00000496205 VRK3Q8IV63 474 aa5.21□□□□□ -1.58
CLK1-214ENST00000496205 NTN5Q8WTR8 489 aaPredicted RBP5.21□□□□□ -1.58
CLK1-214ENST00000496205 RABGGTAQ92696 567 aa5.21□□□□□ -1.58
CLK1-214ENST00000496205 TMX1Q9H3N1 280 aa5.21□□□□□ -1.58
CLK1-214ENST00000496205 SMURF1Q9HCE7 757 aa5.21□□□□□ -1.58
CLK1-214ENST00000496205 SAMD15Q9P1V8 674 aa5.21□□□□□ -1.58
CLK1-214ENST00000496205 CTDP1Q9Y5B0 961 aaPredicted RBP5.21□□□□□ -1.58
CLK1-214ENST00000496205 A0A1W2PRX2 142 aa5.2□□□□□ -1.58
CLK1-214ENST00000496205 CLASP2O75122 1294 aaKnown RBP5.2□□□□□ -1.58
CLK1-214ENST00000496205 GCP02774 474 aa5.2□□□□□ -1.58
CLK1-214ENST00000496205 SRGAP2CP0DJJ0 459 aa5.2□□□□□ -1.58
CLK1-214ENST00000496205 NEK4P51957 841 aa5.2□□□□□ -1.58
CLK1-214ENST00000496205 ATP2C1P98194 919 aaPredicted RBP5.2□□□□□ -1.58
CLK1-214ENST00000496205 STRN3Q13033 797 aa5.2□□□□□ -1.58
CLK1-214ENST00000496205 CNGB1Q14028 1251 aaPredicted RBP5.2□□□□□ -1.58
CLK1-214ENST00000496205 C16orf59Q7L2K0 433 aa5.2□□□□□ -1.58
CLK1-214ENST00000496205 ANKRD35Q8N283 1001 aa5.2□□□□□ -1.58
CLK1-214ENST00000496205 PPM1KQ8N3J5 372 aa5.2□□□□□ -1.58
CLK1-214ENST00000496205 IGSF22Q8N9C0 903 aa5.2□□□□□ -1.58
CLK1-214ENST00000496205 MIEF2Q96C03 454 aa5.2□□□□□ -1.58
CLK1-214ENST00000496205 M0R2C6 588 aa5.19□□□□□ -1.58
CLK1-214ENST00000496205 CBX4O00257 560 aa5.19□□□□□ -1.58
CLK1-214ENST00000496205 TRAF5O00463 557 aa5.19□□□□□ -1.58
CLK1-214ENST00000496205 FAM20BO75063 409 aa5.19□□□□□ -1.58
CLK1-214ENST00000496205 MECP2P51608 486 aaKnown RBP5.19□□□□□ -1.58
CLK1-214ENST00000496205 ADCY7P51828 1080 aa5.19□□□□□ -1.58
CLK1-214ENST00000496205 ST5P78524 1137 aa5.19□□□□□ -1.58
CLK1-214ENST00000496205 CFAP100Q494V2 611 aa5.19□□□□□ -1.58
CLK1-214ENST00000496205 BRDTQ58F21 947 aaPredicted RBP5.19□□□□□ -1.58
CLK1-214ENST00000496205 CT47A1Q5JQC4 288 aaPredicted RBP5.19□□□□□ -1.58
CLK1-214ENST00000496205 CREB3L3Q68CJ9 461 aa5.19□□□□□ -1.58
CLK1-214ENST00000496205 EP400NLQ6ZTU2 488 aa5.19□□□□□ -1.58
CLK1-214ENST00000496205 RAVER1Q8IY67 606 aaKnown RBP5.19□□□□□ -1.58
CLK1-214ENST00000496205 NXPE1Q8N323 547 aa5.19□□□□□ -1.58
CLK1-214ENST00000496205 WDR48Q8TAF3 677 aa5.19□□□□□ -1.58
CLK1-214ENST00000496205 ASB15Q8WXK1 588 aa5.19□□□□□ -1.58
CLK1-214ENST00000496205 XDHP47989 1333 aa5.19□□□□□ -1.58
CLK1-214ENST00000496205 PRAMEF22A3QJZ6 481 aa5.18□□□□□ -1.58
CLK1-214ENST00000496205 RASSF10A6NK89 507 aa5.18□□□□□ -1.58
CLK1-214ENST00000496205 NEMP1O14524 444 aa5.18□□□□□ -1.58
CLK1-214ENST00000496205 NUDT3O95989 172 aa5.18□□□□□ -1.58
CLK1-214ENST00000496205 PDGFRBP09619 1106 aa5.18□□□□□ -1.58
CLK1-214ENST00000496205 BPIP17213 487 aa5.18□□□□□ -1.58
CLK1-214ENST00000496205 MAN2A2P49641 1150 aa5.18□□□□□ -1.58
CLK1-214ENST00000496205 DSG1Q02413 1049 aa5.18□□□□□ -1.58
CLK1-214ENST00000496205 CSRP2Q16527 193 aa5.18□□□□□ -1.58
CLK1-214ENST00000496205 OVCH1Q7RTY7 1134 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms