RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 NBPF4Q96M43 638 aa6.64□□□□□ -1.35
CLTC-208ENST00000496076 ZNF512Q96ME7 567 aaPredicted RBP6.64□□□□□ -1.35
CLTC-208ENST00000496076 MLST8Q9BVC4 326 aa6.64□□□□□ -1.35
CLTC-208ENST00000496076 NCDNQ9UBB6 729 aa6.64□□□□□ -1.35
CLTC-208ENST00000496076 SFMBT1Q9UHJ3 866 aa6.64□□□□□ -1.35
CLTC-208ENST00000496076 PACSIN3Q9UKS6 424 aa6.64□□□□□ -1.35
CLTC-208ENST00000496076 DAPK3O43293 454 aa6.63□□□□□ -1.35
CLTC-208ENST00000496076 LMNAP02545 664 aaKnown RBP6.63□□□□□ -1.35
CLTC-208ENST00000496076 JUNP05412 331 aaKnown RBP6.63□□□□□ -1.35
CLTC-208ENST00000496076 LMO1P25800 156 aa6.63□□□□□ -1.35
CLTC-208ENST00000496076 KIF11P52732 1056 aa6.63□□□□□ -1.35
CLTC-208ENST00000496076 PTPAQ15257 358 aa6.63□□□□□ -1.35
CLTC-208ENST00000496076 CCDC142Q17RM4 750 aa6.63□□□□□ -1.35
CLTC-208ENST00000496076 LY6G5CQ5SRR4 150 aa6.63□□□□□ -1.35
CLTC-208ENST00000496076 BRAPQ7Z569 592 aa6.63□□□□□ -1.35
CLTC-208ENST00000496076 FGD2Q7Z6J4 655 aa6.63□□□□□ -1.35
CLTC-208ENST00000496076 MDGA1Q8NFP4 955 aa6.63□□□□□ -1.35
CLTC-208ENST00000496076 PROKR1Q8TCW9 393 aa6.63□□□□□ -1.35
CLTC-208ENST00000496076 DNAI1Q9UI46 699 aa6.63□□□□□ -1.35
CLTC-208ENST00000496076 FZD1Q9UP38 647 aa6.63□□□□□ -1.35
CLTC-208ENST00000496076 UBA6A0AVT1 1052 aaPredicted RBP6.62□□□□□ -1.35
CLTC-208ENST00000496076 IPO13O94829 963 aaKnown RBP6.62□□□□□ -1.35
CLTC-208ENST00000496076 NR4A1P22736 598 aa6.62□□□□□ -1.35
CLTC-208ENST00000496076 ARHGAP44Q17R89 818 aa6.62□□□□□ -1.35
CLTC-208ENST00000496076 ZNF428Q96B54 188 aa6.62□□□□□ -1.35
CLTC-208ENST00000496076 RIOX1Q9H6W3 641 aa6.62□□□□□ -1.35
CLTC-208ENST00000496076 GRXCR1A8MXD5 290 aa6.61□□□□□ -1.35
CLTC-208ENST00000496076 DVL2O14641 736 aa6.61□□□□□ -1.35
CLTC-208ENST00000496076 KCNQ2O43526 872 aa6.61□□□□□ -1.35
CLTC-208ENST00000496076 ABHD16AO95870 558 aa6.61□□□□□ -1.35
CLTC-208ENST00000496076 ITGB1P05556 798 aa6.61□□□□□ -1.35
CLTC-208ENST00000496076 FBLP22087 321 aaKnown RBP6.61□□□□□ -1.35
CLTC-208ENST00000496076 IL12RB1P42701 662 aa6.61□□□□□ -1.35
CLTC-208ENST00000496076 TTC38Q5R3I4 469 aa6.61□□□□□ -1.35
CLTC-208ENST00000496076 BMP8AQ7Z5Y6 402 aa6.61□□□□□ -1.35
CLTC-208ENST00000496076 CMTM4Q8IZR5 234 aa6.61□□□□□ -1.35
CLTC-208ENST00000496076 THAP3Q8WTV1 239 aaPredicted RBP6.61□□□□□ -1.35
CLTC-208ENST00000496076 ST8SIA2Q92186 375 aa6.61□□□□□ -1.35
CLTC-208ENST00000496076 ACSS2Q9NR19 701 aa6.61□□□□□ -1.35
CLTC-208ENST00000496076 POLR3BQ9NW08 1133 aaPredicted RBP6.61□□□□□ -1.35
CLTC-208ENST00000496076 ZNHIT2Q9UHR6 403 aa6.61□□□□□ -1.35
CLTC-208ENST00000496076 SORCS3Q9UPU3 1222 aa6.61□□□□□ -1.35
CLTC-208ENST00000496076 FAM221BA6H8Z2 402 aa6.6□□□□□ -1.35
CLTC-208ENST00000496076 HNRNPLP14866 589 aaKnown RBP eCLIP6.6□□□□□ -1.35
CLTC-208ENST00000496076 KIR2DL3P43628 341 aa6.6□□□□□ -1.35
CLTC-208ENST00000496076 RANGAP1P46060 587 aaPredicted RBP6.6□□□□□ -1.35
CLTC-208ENST00000496076 MECP2P51608 486 aaKnown RBP6.6□□□□□ -1.35
CLTC-208ENST00000496076 NPEPPSP55786 919 aa6.6□□□□□ -1.35
CLTC-208ENST00000496076 SPIDRQ14159 915 aa6.6□□□□□ -1.35
CLTC-208ENST00000496076 PRAMEF9Q5VWM5 478 aa6.6□□□□□ -1.35
CLTC-208ENST00000496076 NAIF1Q69YI7 327 aaPredicted RBP6.6□□□□□ -1.35
CLTC-208ENST00000496076 TUBGCP5Q96RT8 1024 aa6.6□□□□□ -1.35
CLTC-208ENST00000496076 MRPL4Q9BYD3 311 aaKnown RBP6.6□□□□□ -1.35
CLTC-208ENST00000496076 COL4A3Q01955 1670 aa6.59□□□□□ -1.35
CLTC-208ENST00000496076 STC2O76061 302 aa6.59□□□□□ -1.35
CLTC-208ENST00000496076 GNAT2P19087 354 aa6.59□□□□□ -1.35
CLTC-208ENST00000496076 RASA3Q14644 834 aa6.59□□□□□ -1.35
CLTC-208ENST00000496076 KCNV1Q6PIU1 500 aa6.59□□□□□ -1.35
CLTC-208ENST00000496076 CPT1CQ8TCG5 803 aa6.59□□□□□ -1.35
CLTC-208ENST00000496076 C14orf93Q9H972 538 aaKnown RBP6.59□□□□□ -1.35
CLTC-208ENST00000496076 TRIM39Q9HCM9 518 aa6.59□□□□□ -1.35
CLTC-208ENST00000496076 PTGFRNQ9P2B2 879 aa6.59□□□□□ -1.35
CLTC-208ENST00000496076 HS3ST4Q9Y661 456 aa6.59□□□□□ -1.35
CLTC-208ENST00000496076 CCDC163A0A0D9SF12 145 aa6.58□□□□□ -1.36
CLTC-208ENST00000496076 M0R2C6 588 aa6.58□□□□□ -1.36
CLTC-208ENST00000496076 HK1P19367 917 aa6.58□□□□□ -1.36
CLTC-208ENST00000496076 ATP2B1P20020 1258 aa6.58□□□□□ -1.36
CLTC-208ENST00000496076 BCAR1P56945 870 aa6.58□□□□□ -1.36
CLTC-208ENST00000496076 MRPS21P82921 87 aaKnown RBP6.58□□□□□ -1.36
CLTC-208ENST00000496076 LRRC55Q6ZSA7 311 aa6.58□□□□□ -1.36
CLTC-208ENST00000496076 LRP10Q7Z4F1 713 aa6.58□□□□□ -1.36
CLTC-208ENST00000496076 NPM2Q86SE8 214 aaKnown RBP6.58□□□□□ -1.36
CLTC-208ENST00000496076 RPGRQ92834 1020 aaKnown RBP6.58□□□□□ -1.36
CLTC-208ENST00000496076 C16orf92Q96LL3 132 aa6.58□□□□□ -1.36
CLTC-208ENST00000496076 DEPDC7Q96QD5 511 aa6.58□□□□□ -1.36
CLTC-208ENST00000496076 DNAJC7Q99615 494 aa6.58□□□□□ -1.36
CLTC-208ENST00000496076 HAPLN2Q9GZV7 340 aa6.58□□□□□ -1.36
CLTC-208ENST00000496076 SYNPO2Q9UMS6 1093 aa6.58□□□□□ -1.36
CLTC-208ENST00000496076 CCDC9Q9Y3X0 531 aaKnown RBP6.58□□□□□ -1.36
CLTC-208ENST00000496076 GRID2IPA4D2P6 1211 aa6.57□□□□□ -1.36
CLTC-208ENST00000496076 PPFIA4O75335 1185 aa6.57□□□□□ -1.36
CLTC-208ENST00000496076 CYP17A1P05093 508 aa6.57□□□□□ -1.36
CLTC-208ENST00000496076 MYBPC3Q14896 1274 aa6.57□□□□□ -1.36
CLTC-208ENST00000496076 TIGD2Q4W5G0 525 aa6.57□□□□□ -1.36
CLTC-208ENST00000496076 DCAF17Q5H9S7 520 aaPredicted RBP6.57□□□□□ -1.36
CLTC-208ENST00000496076 DDX53Q86TM3 631 aaKnown RBP6.57□□□□□ -1.36
CLTC-208ENST00000496076 ZNF764Q96H86 408 aaPredicted RBP6.57□□□□□ -1.36
CLTC-208ENST00000496076 PCIF1Q9H4Z3 704 aa6.57□□□□□ -1.36
CLTC-208ENST00000496076 ZAR1LA6NP61 321 aa6.56□□□□□ -1.36
CLTC-208ENST00000496076 B3GALT2O43825 422 aa6.56□□□□□ -1.36
CLTC-208ENST00000496076 RECQL4O94761 1208 aa6.56□□□□□ -1.36
CLTC-208ENST00000496076 SCAF4O95104 1147 aaKnown RBP6.56□□□□□ -1.36
CLTC-208ENST00000496076 PTX3P26022 381 aaPredicted RBP6.56□□□□□ -1.36
CLTC-208ENST00000496076 SERINC3Q13530 473 aa6.56□□□□□ -1.36
CLTC-208ENST00000496076 NAALADL2Q58DX5 795 aa6.56□□□□□ -1.36
CLTC-208ENST00000496076 APBB1IPQ7Z5R6 666 aaPredicted RBP6.56□□□□□ -1.36
CLTC-208ENST00000496076 CXorf67Q86X51 503 aaPredicted RBP6.56□□□□□ -1.36
CLTC-208ENST00000496076 PRIMA1Q86XR5 153 aa6.56□□□□□ -1.36
CLTC-208ENST00000496076 NME9Q86XW9 330 aa6.56□□□□□ -1.36
CLTC-208ENST00000496076 ZSWIM2Q8NEG5 633 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms