RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 DEFB132Q7Z7B7 95 aa9.49□□□□□ -0.89
EPHA4-213ENST00000495693 LDHDQ86WU2 507 aa9.49□□□□□ -0.89
EPHA4-213ENST00000495693 REXO1L1PQ8IX06 675 aa9.49□□□□□ -0.89
EPHA4-213ENST00000495693 DNAJC19Q96DA6 116 aa9.49□□□□□ -0.89
EPHA4-213ENST00000495693 NACC1Q96RE7 527 aa9.49□□□□□ -0.89
EPHA4-213ENST00000495693 DUSP9Q99956 384 aaKnown RBP9.49□□□□□ -0.89
EPHA4-213ENST00000495693 WDR18Q9BV38 432 aa9.49□□□□□ -0.89
EPHA4-213ENST00000495693 TMEM39BQ9GZU3 492 aa9.49□□□□□ -0.89
EPHA4-213ENST00000495693 OLFML3Q9NRN5 406 aa9.49□□□□□ -0.89
EPHA4-213ENST00000495693 CCPG1Q9ULG6 757 aa9.49□□□□□ -0.89
EPHA4-213ENST00000495693 GJA3Q9Y6H8 435 aa9.49□□□□□ -0.89
EPHA4-213ENST00000495693 BRCA1P38398 1863 aaKnown RBP9.49□□□□□ -0.89
EPHA4-213ENST00000495693 EFCAB8A8MWE9 144 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 B4DLN1 442 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 FZD9O00144 591 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 PDXKO00764 312 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 SLC16A3O15427 465 aaKnown RBP9.48□□□□□ -0.89
EPHA4-213ENST00000495693 MSH4O15457 936 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 MAFGO15525 162 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 USO1O60763 962 aaKnown RBP9.48□□□□□ -0.89
EPHA4-213ENST00000495693 MAPTP10636 758 aaKnown RBP9.48□□□□□ -0.89
EPHA4-213ENST00000495693 FCER1AP12319 257 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 CYP11B2P19099 503 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 SLC12A3P55017 1021 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 GNG11P61952 73 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 SPIRE1Q08AE8 756 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 EPHA7Q15375 998 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 SPA17Q15506 151 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 OCLNQ16625 522 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 MEA1Q16626 185 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 BMT2Q1RMZ1 405 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 GLIPR1L2Q4G1C9 344 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 CATSPER3Q86XQ3 398 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 IRF2BP1Q8IU81 584 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 SPICE1Q8N0Z3 855 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 CEP112Q8N8E3 955 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 RDM1Q8NG50 284 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 NEK11Q8NG66 645 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 ANKRD7Q92527 254 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 SYN2Q92777 582 aaPredicted RBP9.48□□□□□ -0.89
EPHA4-213ENST00000495693 SLC5A5Q92911 643 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 LENG9Q96B70 501 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 NDST4Q9H3R1 872 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 PICK1Q9NRD5 415 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 TBC1D22BQ9NU19 505 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 KCNG1Q9UIX4 513 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 TRAF3IP3Q9Y228 551 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 MYPNQ86TC9 1320 aa9.48□□□□□ -0.89
EPHA4-213ENST00000495693 IGLV3-22A0A075B6J6 115 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 CTAGE9A4FU28 777 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 FAM86B1E9PN63 330 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 TRAF5O00463 557 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 MEIS1O00470 390 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 EDIL3O43854 480 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 STAM2O75886 525 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 FAM13AO94988 1023 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 FAM86B2P0C5J1 330 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 SCP2P22307 547 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 ANXA13P27216 316 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 HNRNPH3P31942 346 aaKnown RBP9.47□□□□□ -0.89
EPHA4-213ENST00000495693 SFNP31947 248 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 FXR1P51114 621 aaKnown RBP eCLIP9.47□□□□□ -0.89
EPHA4-213ENST00000495693 PMS1P54277 932 aaKnown RBP9.47□□□□□ -0.89
EPHA4-213ENST00000495693 SNRPFP62306 86 aaKnown RBP9.47□□□□□ -0.89
EPHA4-213ENST00000495693 MYBPC2Q14324 1141 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 SUPT20HL1Q3ZLR7 823 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 TMEM164Q5U3C3 297 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 PCNX4Q63HM2 1172 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 IQCEQ6IPM2 695 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 CCDC174Q6PII3 467 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 LRRC69Q6ZNQ3 347 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 OTOP1Q7RTM1 612 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 CACNA2D4Q7Z3S7 1137 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 FRMD5Q7Z6J6 570 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 ZC3H3Q8IXZ2 948 aaKnown RBP9.47□□□□□ -0.89
EPHA4-213ENST00000495693 SCYL3Q8IZE3 742 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 ACER1Q8TDN7 264 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 CPLX3Q8WVH0 158 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 UBXN4Q92575 508 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 CLP1Q92989 425 aaKnown RBP9.47□□□□□ -0.89
EPHA4-213ENST00000495693 VTI1AQ96AJ9 217 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 CDHR1Q96JP9 859 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 C12orf42Q96LP6 360 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 IWS1Q96ST2 819 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 EIF2AK1Q9BQI3 630 aaKnown RBP9.47□□□□□ -0.89
EPHA4-213ENST00000495693 MXRA8Q9BRK3 442 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 ZNF577Q9BSK1 485 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 TANGO6Q9C0B7 1094 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 SEMA6BQ9H3T3 888 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 SLC38A10Q9HBR0 1119 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 TYW1Q9NV66 732 aaKnown RBP9.47□□□□□ -0.89
EPHA4-213ENST00000495693 PGAP2Q9UHJ9 254 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 VAV3Q9UKW4 847 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.47□□□□□ -0.89
EPHA4-213ENST00000495693 FRMPD4Q14CM0 1322 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 RPTORQ8N122 1335 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 RBBP6Q7Z6E9 1792 aaKnown RBP9.47□□□□□ -0.89
EPHA4-213ENST00000495693 ATAD5Q96QE3 1844 aa9.47□□□□□ -0.89
EPHA4-213ENST00000495693 COL4A5P29400 1685 aa9.46□□□□□ -0.89
EPHA4-213ENST00000495693 SSU72P8A0A1W2PR75 194 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms