RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 NDST4Q9H3R1 872 aa11.27□□□□□ -0.61
HDAC3-214ENST00000495485 XPNPEP3Q9NQH7 507 aa11.27□□□□□ -0.61
HDAC3-214ENST00000495485 NRBP2Q9NSY0 501 aa11.27□□□□□ -0.61
HDAC3-214ENST00000495485 INTS13Q9NVM9 706 aa11.27□□□□□ -0.61
HDAC3-214ENST00000495485 GNEQ9Y223 722 aaKnown RBP11.27□□□□□ -0.61
HDAC3-214ENST00000495485 SLC16A3O15427 465 aaKnown RBP11.26□□□□□ -0.61
HDAC3-214ENST00000495485 ATP9AO75110 1047 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 HIP1RO75146 1068 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 DGAT1O75907 488 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 GH1P01241 217 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 SUPT20HL2P0C7V6 817 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 PLS3P13797 630 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 ACTR2P61160 394 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-214ENST00000495485 RBL2Q08999 1139 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 TRIM32Q13049 653 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 LAMC2Q13753 1193 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 PTPN14Q15678 1187 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 ZCWPW2Q504Y3 356 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 FIGNQ5HY92 759 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 SWSAP1Q6NVH7 229 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 CYP26C1Q6V0L0 522 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 SEPT14Q6ZU15 432 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 ZNF720Q7Z2F6 126 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 NECAB2Q7Z6G3 386 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 FBXO16Q8IX29 292 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-214ENST00000495485 OR8K1Q8NGG5 319 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 HPS3Q969F9 1004 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 FAM167AQ96KS9 214 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 CEP170P1Q96L14 293 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 IFT74Q96LB3 600 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 ACCSQ96QU6 501 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 MKNK1Q9BUB5 465 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 EDEM3Q9BZQ6 932 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 GBP3Q9H0R5 595 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 KCTD10Q9H3F6 313 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 ST6GALNAC4Q9H4F1 302 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 AZI2Q9H6S1 392 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 MLXIPQ9HAP2 919 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 GABBR1Q9UBS5 961 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 PYCARDQ9ULZ3 195 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 FRMD4BQ9Y2L6 1034 aa11.26□□□□□ -0.61
HDAC3-214ENST00000495485 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.26□□□□□ -0.61
HDAC3-214ENST00000495485 WDR81Q562E7 1941 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 SCN10AQ9Y5Y9 1956 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 A0A1W2PQJ5 194 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 K7ENM7 598 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 USO1O60763 962 aaKnown RBP11.25□□□□□ -0.61
HDAC3-214ENST00000495485 MFAP3LO75121 409 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 ATG7O95352 703 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 TXNP10599 105 aaKnown RBP11.25□□□□□ -0.61
HDAC3-214ENST00000495485 NR2F2P24468 414 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 CASP14P31944 242 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 ADKP55263 362 aaKnown RBP11.25□□□□□ -0.61
HDAC3-214ENST00000495485 C1orf53Q5VUE5 145 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 CCDC62Q6P9F0 684 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 ABHD15Q6UXT9 468 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 TLK2Q86UE8 772 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 FMNL3Q8IVF7 1028 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 ZC3H3Q8IXZ2 948 aaKnown RBP11.25□□□□□ -0.61
HDAC3-214ENST00000495485 TC2NQ8N9U0 490 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 CPLX3Q8WVH0 158 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 SEPT1Q8WYJ6 367 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 PURBQ96QR8 312 aaKnown RBP11.25□□□□□ -0.61
HDAC3-214ENST00000495485 JPH2Q9BR39 696 aaPredicted RBP11.25□□□□□ -0.61
HDAC3-214ENST00000495485 HTATIP2Q9BUP3 242 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 ZNF302Q9NR11 478 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 ARMCX3Q9UH62 379 aaPredicted RBP11.25□□□□□ -0.61
HDAC3-214ENST00000495485 CAPN11Q9UMQ6 739 aa11.25□□□□□ -0.61
HDAC3-214ENST00000495485 A6NJR5 290 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 NOP56O00567 594 aaKnown RBP11.24□□□□□ -0.61
HDAC3-214ENST00000495485 GAS2O43903 313 aaKnown RBP11.24□□□□□ -0.61
HDAC3-214ENST00000495485 ADAMTS4O75173 837 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 FARP2O94887 1054 aaPredicted RBP11.24□□□□□ -0.61
HDAC3-214ENST00000495485 PRPF6O94906 941 aaKnown RBP11.24□□□□□ -0.61
HDAC3-214ENST00000495485 IPO7O95373 1038 aaKnown RBP11.24□□□□□ -0.61
HDAC3-214ENST00000495485 CCNE2O96020 404 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 MYBP10242 640 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 KRT9P35527 623 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 PSMC2P35998 433 aaKnown RBP11.24□□□□□ -0.61
HDAC3-214ENST00000495485 RFC5P40937 340 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 ADCYAP1R1P41586 468 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 TERF1P54274 439 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 RTP1P59025 263 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 ZBED6P86452 979 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 DMP1Q13316 513 aaPredicted RBP11.24□□□□□ -0.61
HDAC3-214ENST00000495485 PPP2R5AQ15172 486 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 PRAMEF19Q5SWL8 479 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 METTL7BQ6UX53 244 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 LRRC55Q6ZSA7 311 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 CYFIP1Q7L576 1253 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 CCAR2Q8N163 923 aaKnown RBP11.24□□□□□ -0.61
HDAC3-214ENST00000495485 TXLNBQ8N3L3 684 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 KLHDC9Q8NEP7 349 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 NEK11Q8NG66 645 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 ATP6V0A4Q9HBG4 840 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 DDX41Q9UJV9 622 aaKnown RBP11.24□□□□□ -0.61
HDAC3-214ENST00000495485 DAAM1Q9Y4D1 1078 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 PAXBP1Q9Y5B6 917 aa11.24□□□□□ -0.61
HDAC3-214ENST00000495485 SFI1A8K8P3 1242 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms