RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.33□□□□□ -0.76
GARNL3-219ENST00000495172 RAI2Q9Y5P3 530 aa10.33□□□□□ -0.76
GARNL3-219ENST00000495172 MYO9AB2RTY4 2548 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 ARHGAP6O43182 974 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 GPAA1O43292 621 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 ZC3H11AO75152 810 aaKnown RBP eCLIP10.32□□□□□ -0.76
GARNL3-219ENST00000495172 RPS6KA5O75582 802 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 TRIM27P14373 513 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 INSRRP14616 1297 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 TCF7P36402 384 aaPredicted RBP10.32□□□□□ -0.76
GARNL3-219ENST00000495172 RPS9P46781 194 aaKnown RBP10.32□□□□□ -0.76
GARNL3-219ENST00000495172 NRLP54845 237 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 FAM189BP81408 668 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 KRT76Q01546 638 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 METTL7BQ6UX53 244 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 ZNF687Q8N1G0 1237 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 DEFB124Q8NES8 71 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 STAMQ92783 540 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 SEC62Q99442 399 aaKnown RBP10.32□□□□□ -0.76
GARNL3-219ENST00000495172 ZNF287Q9HBT7 754 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 RAXQ9Y2V3 346 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 MSRB2Q9Y3D2 182 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 ABCB11O95342 1321 aa10.32□□□□□ -0.76
GARNL3-219ENST00000495172 ASCC3Q8N3C0 2202 aaKnown RBP10.31□□□□□ -0.76
GARNL3-219ENST00000495172 SPAARA0A1B0GVQ0 90 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 M0QZ92 97 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 MAGEA9P43362 315 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 PXNP49023 591 aaPredicted RBP10.31□□□□□ -0.76
GARNL3-219ENST00000495172 MRPS9P82933 396 aaKnown RBP10.31□□□□□ -0.76
GARNL3-219ENST00000495172 SLFN5Q08AF3 891 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 SCAPQ12770 1279 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 PLCB4Q15147 1175 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 QRICH1Q2TAL8 776 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 GIMAP6Q6P9H5 292 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 KBTBD6Q86V97 674 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 FAM228AQ86W67 206 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 TMEM57Q8N5G2 664 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 RHPN1Q8TCX5 695 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 SPOCK2Q92563 424 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 EDEM2Q9BV94 578 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 PLA2G2FQ9BZM2 168 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 CHRDQ9H2X0 955 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 PIDD1Q9HB75 910 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 VAT1LQ9HCJ6 419 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 NEUROG3Q9Y4Z2 214 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 IRAK3Q9Y616 596 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 SQORQ9Y6N5 450 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 ATMQ13315 3056 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 EVPLQ92817 2033 aa10.31□□□□□ -0.76
GARNL3-219ENST00000495172 NOVP48745 357 aa10.3□□□□□ -0.76
GARNL3-219ENST00000495172 ALDH7A1P49419 539 aaKnown RBP10.3□□□□□ -0.76
GARNL3-219ENST00000495172 HSD17B4P51659 736 aa10.3□□□□□ -0.76
GARNL3-219ENST00000495172 DSC3Q14574 896 aa10.3□□□□□ -0.76
GARNL3-219ENST00000495172 KCNV1Q6PIU1 500 aa10.3□□□□□ -0.76
GARNL3-219ENST00000495172 DDX53Q86TM3 631 aaKnown RBP10.3□□□□□ -0.76
GARNL3-219ENST00000495172 FCHSD1Q86WN1 690 aa10.3□□□□□ -0.76
GARNL3-219ENST00000495172 ABI1Q8IZP0 508 aa10.3□□□□□ -0.76
GARNL3-219ENST00000495172 CHCHD4Q8N4Q1 142 aa10.3□□□□□ -0.76
GARNL3-219ENST00000495172 CMASQ8NFW8 434 aaPredicted RBP10.3□□□□□ -0.76
GARNL3-219ENST00000495172 IGSF21Q96ID5 467 aa10.3□□□□□ -0.76
GARNL3-219ENST00000495172 LMAN1LQ9HAT1 526 aa10.3□□□□□ -0.76
GARNL3-219ENST00000495172 C1orf112Q9NSG2 853 aa10.3□□□□□ -0.76
GARNL3-219ENST00000495172 RBM12Q9NTZ6 932 aaKnown RBP10.3□□□□□ -0.76
GARNL3-219ENST00000495172 PKD2L1Q9P0L9 805 aa10.3□□□□□ -0.76
GARNL3-219ENST00000495172 DNAJB4Q9UDY4 337 aa10.3□□□□□ -0.76
GARNL3-219ENST00000495172 PCDHA1Q9Y5I3 950 aa10.3□□□□□ -0.76
GARNL3-219ENST00000495172 GSTTP1A0A1W2PQM5 241 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 K7ESF4 209 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 PPP1R11O60927 126 aaPredicted RBP10.29□□□□□ -0.76
GARNL3-219ENST00000495172 LILRB3O75022 631 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 IFIT2P09913 472 aaKnown RBP10.29□□□□□ -0.76
GARNL3-219ENST00000495172 TGFB3P10600 412 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 TOP1P11387 765 aaKnown RBP10.29□□□□□ -0.76
GARNL3-219ENST00000495172 CCND2P30279 289 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 RRP12Q5JTH9 1297 aaKnown RBP10.29□□□□□ -0.76
GARNL3-219ENST00000495172 PLA2G2CQ5R387 149 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 TAS1R1Q7RTX1 841 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 ZNF605Q86T29 641 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 PPFIBP1Q86W92 1011 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 ECHDC2Q86YB7 292 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 GLYCTKQ8IVS8 523 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 ADGRF4Q8IZF3 695 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 FAM9BQ8IZU0 186 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 MDM1Q8TC05 714 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 PIK3R5Q8WYR1 880 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 SLC39A7Q92504 469 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 ZNF668Q96K58 619 aaPredicted RBP10.29□□□□□ -0.76
GARNL3-219ENST00000495172 OSMRQ99650 979 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 GBP3Q9H0R5 595 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 NOTCH4Q99466 2003 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 RELNP78509 3460 aa10.29□□□□□ -0.76
GARNL3-219ENST00000495172 URB1O60287 2271 aaKnown RBP10.28□□□□□ -0.76
GARNL3-219ENST00000495172 EML5Q05BV3 1969 aa10.28□□□□□ -0.76
GARNL3-219ENST00000495172 SPATA31C2B4DYI2 1134 aa10.28□□□□□ -0.76
GARNL3-219ENST00000495172 NRG2O14511 850 aaPredicted RBP10.28□□□□□ -0.76
GARNL3-219ENST00000495172 FOXD2O60548 495 aaPredicted RBP10.28□□□□□ -0.76
GARNL3-219ENST00000495172 ATP9AO75110 1047 aa10.28□□□□□ -0.76
GARNL3-219ENST00000495172 KRT38O76015 456 aa10.28□□□□□ -0.76
GARNL3-219ENST00000495172 EPN2O95208 641 aa10.28□□□□□ -0.76
GARNL3-219ENST00000495172 MPLP40238 635 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms