RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 FAM186BQ8IYM0 893 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 TMEM161BQ8NDZ6 487 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 KCNN1Q92952 543 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 BORCS6Q96GS4 357 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 MS4A3Q96HJ5 214 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 IFT74Q96LB3 600 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 SPATA33Q96N06 139 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 CEP89Q96ST8 783 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 POLR3FQ9H1D9 316 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-245ENST00000494862 DHX33Q9H6R0 707 aaKnown RBP12.6□□□□□ -0.39
HDLBP-245ENST00000494862 KMT5AQ9NQR1 393 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 PDGFCQ9NRA1 345 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-245ENST00000494862 SLC5A4Q9NY91 659 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 TLL2Q9Y6L7 1015 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 CCDC169A6NNP5 214 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 ZSCAN12O43309 604 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 AFPP02771 609 aaKnown RBP12.59□□□□□ -0.39
HDLBP-245ENST00000494862 SCP2P22307 547 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 CASP4P49662 377 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 SLC26A2P50443 739 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 KCNMA1Q12791 1236 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 KCNH2Q12809 1159 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 LAMC2Q13753 1193 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 TAF1CQ15572 869 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-245ENST00000494862 HSDL1Q3SXM5 330 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 CYP26C1Q6V0L0 522 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 MSL3Q8N5Y2 521 aaKnown RBP12.59□□□□□ -0.39
HDLBP-245ENST00000494862 ZNF397Q8NF99 534 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-245ENST00000494862 BSNDQ8WZ55 320 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 COPS5Q92905 334 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 CCDC102AQ96A19 550 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 MAML3Q96JK9 1138 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 PPP1R13BQ96KQ4 1090 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 DNAJC7Q99615 494 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 KATNBL1Q9H079 304 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 IKZF4Q9H2S9 585 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 MMRN2Q9H8L6 949 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 GPBP1L1Q9HC44 474 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-245ENST00000494862 TRMT1Q9NXH9 659 aaKnown RBP12.59□□□□□ -0.39
HDLBP-245ENST00000494862 CPA4Q9UI42 421 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 TBX20Q9UMR3 447 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 FRMD4BQ9Y2L6 1034 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 EMSYQ7Z589 1322 aa12.59□□□□□ -0.39
HDLBP-245ENST00000494862 USP27XA6NNY8 438 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 SNAI1O95863 264 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-245ENST00000494862 GH1P01241 217 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 XRCC5P13010 732 aaKnown RBP12.58□□□□□ -0.4
HDLBP-245ENST00000494862 ARL2P36404 184 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 CYP2J2P51589 502 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 SOX10P56693 466 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 ARHGAP1Q07960 439 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 PPP2R5AQ15172 486 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 DNTTIP2Q5QJE6 756 aaKnown RBP12.58□□□□□ -0.4
HDLBP-245ENST00000494862 MORN1Q5T089 497 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 C17orf99Q6UX52 265 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 IFNL1Q8IU54 200 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 MAP4K3Q8IVH8 894 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 EXOC8Q8IYI6 725 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 NEK11Q8NG66 645 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 ATP8B4Q8TF62 1192 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 SLC7A3Q8WY07 619 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 BBXQ8WY36 941 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-245ENST00000494862 GLG1Q92896 1179 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 EMID1Q96A84 441 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-245ENST00000494862 SMARCAD1Q9H4L7 1026 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 PCDHB8Q9UN66 801 aa12.58□□□□□ -0.4
HDLBP-245ENST00000494862 DOCK5Q9H7D0 1870 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 ZNFX1Q9P2E3 1918 aaKnown RBP12.57□□□□□ -0.4
HDLBP-245ENST00000494862 DENND3A2RUS2 1198 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 GTPBP10A4D1E9 387 aaKnown RBP12.57□□□□□ -0.4
HDLBP-245ENST00000494862 GOLGA6L9A6NEM1 432 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 SOWAHDA6NJG2 315 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 KIF2AO00139 706 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-245ENST00000494862 MAPK13O15264 365 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 GALR2O43603 387 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-245ENST00000494862 EXOC3O60645 756 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 MAFO75444 373 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-245ENST00000494862 CDK17Q00537 523 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 SREBF2Q12772 1141 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 MAP2K5Q13163 448 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 PLCB4Q15147 1175 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 MEA1Q16626 185 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 RAD9BQ6WBX8 426 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 NYAP1Q6ZVC0 841 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 REXO1L1PQ8IX06 675 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 CCDC155Q8N6L0 562 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 NPLOC4Q8TAT6 608 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 SP7Q8TDD2 431 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-245ENST00000494862 SLC35C1Q96A29 364 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 TMEM143Q96AN5 459 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 JPH2Q9BR39 696 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-245ENST00000494862 TINF2Q9BSI4 451 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 LSM14BQ9BX40 385 aaKnown RBP12.57□□□□□ -0.4
HDLBP-245ENST00000494862 ZFYVE28Q9HCC9 887 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 AGPAT5Q9NUQ2 364 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 ZNHIT6Q9NWK9 470 aaKnown RBP12.57□□□□□ -0.4
HDLBP-245ENST00000494862 ARHGAP28Q9P2N2 729 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 PPP2R2CQ9Y2T4 447 aa12.57□□□□□ -0.4
HDLBP-245ENST00000494862 PLXNB2O15031 1838 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms