RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 GTF2BQ00403 316 aa20.26■□□□□ 0.83
TSPAN4-212ENST00000494815 FAM102BQ5T8I3 360 aa20.26■□□□□ 0.83
TSPAN4-212ENST00000494815 SLC9A9Q8IVB4 645 aa20.26■□□□□ 0.83
TSPAN4-212ENST00000494815 MORC4Q8TE76 937 aa20.26■□□□□ 0.83
TSPAN4-212ENST00000494815 HNRNPLLQ8WVV9 542 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-212ENST00000494815 BRI3BPQ8WY22 251 aa20.26■□□□□ 0.83
TSPAN4-212ENST00000494815 ZNF302Q9NR11 478 aa20.26■□□□□ 0.83
TSPAN4-212ENST00000494815 FAM207AQ9NSI2 230 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-212ENST00000494815 DMAC2Q9NW81 257 aa20.26■□□□□ 0.83
TSPAN4-212ENST00000494815 PSMC2P35998 433 aaKnown RBP20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 NCKAP1LP55160 1127 aa20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 KCNH2Q12809 1159 aa20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 MAPK8IP2Q13387 824 aaPredicted RBP20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 WDR78Q5VTH9 848 aa20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 METTL7BQ6UX53 244 aa20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 TRMT1LQ7Z2T5 733 aaKnown RBP20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 SYCP3Q8IZU3 236 aa20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 ACCSQ96QU6 501 aa20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 CYP26B1Q9NR63 512 aa20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 SEPT9Q9UHD8 586 aaPredicted RBP20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 HNRNPH3P31942 346 aaKnown RBP20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 RTP1P59025 263 aa20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 SNRPFP62306 86 aaKnown RBP20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 CDK17Q00537 523 aa20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 KCNMA1Q12791 1236 aa20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 HAUS6Q7Z4H7 955 aa20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 KSR1Q8IVT5 923 aa20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 CEP112Q8N8E3 955 aa20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 PORCNQ9H237 461 aa20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 GPRC5CQ9NQ84 441 aa20.25■□□□□ 0.83
TSPAN4-212ENST00000494815 AFPP02771 609 aaKnown RBP20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 CASP4P49662 377 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 SMTNP53814 917 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 PEX3P56589 373 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 DMP1Q13316 513 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 TUBB2AQ13885 445 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 SPRYD7Q5W111 196 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 WDR59Q6PJI9 974 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 SPIRE2Q8WWL2 714 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 HVCN1Q96D96 273 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 BORCS6Q96GS4 357 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 TUBB2BQ9BVA1 445 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 IRX2Q9BZI1 471 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 PDLIM7Q9NR12 457 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 CDC23Q9UJX2 597 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 H3BQF6 201 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 KIF5CO60282 957 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 SORBS3O60504 671 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 ZSCAN26Q16670 478 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 C12orf56Q8IXR9 622 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 FAM186BQ8IYM0 893 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 ZNF526Q8TF50 670 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 NTPCRQ9BSD7 190 aaKnown RBP20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 LZTFL1Q9NQ48 299 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 MORF4L1Q9UBU8 362 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 ADAM21Q9UKJ8 722 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 PLAGL2Q9UPG8 496 aa20.24■□□□□ 0.83
TSPAN4-212ENST00000494815 EPHB6O15197 1021 aa20.23■□□□□ 0.83
TSPAN4-212ENST00000494815 OATP04181 439 aa20.23■□□□□ 0.83
TSPAN4-212ENST00000494815 TUBB4BP68371 445 aa20.23■□□□□ 0.83
TSPAN4-212ENST00000494815 CCDC155Q8N6L0 562 aa20.23■□□□□ 0.83
TSPAN4-212ENST00000494815 MSANTD4Q8NCY6 345 aa20.23■□□□□ 0.83
TSPAN4-212ENST00000494815 CHP1Q99653 195 aa20.23■□□□□ 0.83
TSPAN4-212ENST00000494815 ANKZF1Q9H8Y5 726 aa20.23■□□□□ 0.83
TSPAN4-212ENST00000494815 EFCC1Q9HA90 598 aa20.23■□□□□ 0.83
TSPAN4-212ENST00000494815 ATP6V0A4Q9HBG4 840 aa20.23■□□□□ 0.83
TSPAN4-212ENST00000494815 RAB21Q9UL25 225 aa20.23■□□□□ 0.83
TSPAN4-212ENST00000494815 FRMD4BQ9Y2L6 1034 aa20.23■□□□□ 0.83
TSPAN4-212ENST00000494815 ARID2Q68CP9 1835 aa20.23■□□□□ 0.83
TSPAN4-212ENST00000494815 GSTTP1A0A1W2PQM5 241 aa20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 ASB14A6NK59 587 aa20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 GGPS1O95749 300 aa20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 ABRAQ8N0Z2 381 aa20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 MSL3Q8N5Y2 521 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 AFAP1L1Q8TED9 768 aa20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 SLC35C1Q96A29 364 aa20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 NUCKS1Q9H1E3 243 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 IKZF4Q9H2S9 585 aa20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 CEP72Q9P209 647 aa20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 FEZ2Q9UHY8 353 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 EPN1Q9Y6I3 576 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 MYH9P35579 1960 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 NPTX2P47972 431 aa20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 MKRN3Q13064 507 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 FAM160B1Q5W0V3 765 aa20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 EEPD1Q7L9B9 569 aa20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 SEPT1Q8WYJ6 367 aa20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 KCNG1Q9UIX4 513 aa20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 EXOC7Q9UPT5 735 aa20.22■□□□□ 0.83
TSPAN4-212ENST00000494815 SLC16A4O15374 487 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 NDUFA10O95299 355 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 ATP4AP20648 1035 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 BEND6Q5SZJ8 279 aaPredicted RBP20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 CCDC170Q8IYT3 715 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 ANKRD13CQ8N6S4 541 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 TMEM161BQ8NDZ6 487 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 BAP1Q92560 729 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 SECISBP2LQ93073 1101 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 PARK7Q99497 189 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 NIFKQ9BYG3 293 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms