RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 NT5C3AQ9H0P0 336 aa23.07■■□□□ 1.28
CCDC12-207ENST00000494655 POLR3FQ9H1D9 316 aaPredicted RBP23.07■■□□□ 1.28
CCDC12-207ENST00000494655 XPNPEP1Q9NQW7 623 aa23.07■■□□□ 1.28
CCDC12-207ENST00000494655 CHST12Q9NRB3 414 aa23.07■■□□□ 1.28
CCDC12-207ENST00000494655 DNM3Q9UQ16 869 aa23.07■■□□□ 1.28
CCDC12-207ENST00000494655 MTMR6Q9Y217 621 aa23.07■■□□□ 1.28
CCDC12-207ENST00000494655 PIN4Q9Y237 131 aaKnown RBP23.07■■□□□ 1.28
CCDC12-207ENST00000494655 PP2D1A8MPX8 630 aa23.06■■□□□ 1.28
CCDC12-207ENST00000494655 HOXA2O43364 376 aa23.06■■□□□ 1.28
CCDC12-207ENST00000494655 GTPBP6O43824 516 aaPredicted RBP23.06■■□□□ 1.28
CCDC12-207ENST00000494655 MGEA5O60502 916 aa23.06■■□□□ 1.28
CCDC12-207ENST00000494655 ERLIN2O94905 339 aa23.06■■□□□ 1.28
CCDC12-207ENST00000494655 IGFBP4P22692 258 aa23.06■■□□□ 1.28
CCDC12-207ENST00000494655 PCBP1Q15365 356 aaKnown RBP eCLIP23.06■■□□□ 1.28
CCDC12-207ENST00000494655 RTN4RL1Q86UN2 441 aaPredicted RBP23.06■■□□□ 1.28
CCDC12-207ENST00000494655 KCTD17Q8N5Z5 321 aa23.06■■□□□ 1.28
CCDC12-207ENST00000494655 BHMT2Q9H2M3 363 aa23.06■■□□□ 1.28
CCDC12-207ENST00000494655 TMEM161AQ9NX61 479 aa23.06■■□□□ 1.28
CCDC12-207ENST00000494655 A0A087WWV3 80 aa23.05■■□□□ 1.28
CCDC12-207ENST00000494655 DGKIO75912 1065 aa23.05■■□□□ 1.28
CCDC12-207ENST00000494655 FGFR4P22455 802 aa23.05■■□□□ 1.28
CCDC12-207ENST00000494655 ERVK-21P61565 698 aa23.05■■□□□ 1.28
CCDC12-207ENST00000494655 NCBP1Q09161 790 aaKnown RBP23.05■■□□□ 1.28
CCDC12-207ENST00000494655 FAM102BQ5T8I3 360 aa23.05■■□□□ 1.28
CCDC12-207ENST00000494655 TWF2Q6IBS0 349 aaKnown RBP23.05■■□□□ 1.28
CCDC12-207ENST00000494655 CMTR2Q8IYT2 770 aaKnown RBP23.05■■□□□ 1.28
CCDC12-207ENST00000494655 MAFAQ8NHW3 353 aaPredicted RBP23.05■■□□□ 1.28
CCDC12-207ENST00000494655 ELAC1Q9H777 363 aaKnown RBP23.05■■□□□ 1.28
CCDC12-207ENST00000494655 IFT122Q9HBG6 1241 aa23.05■■□□□ 1.28
CCDC12-207ENST00000494655 C9IYK1 514 aa23.04■■□□□ 1.28
CCDC12-207ENST00000494655 SLC26A4O43511 780 aa23.04■■□□□ 1.28
CCDC12-207ENST00000494655 CSDE1O75534 798 aaKnown RBP23.04■■□□□ 1.28
CCDC12-207ENST00000494655 ARHGEF15O94989 841 aa23.04■■□□□ 1.28
CCDC12-207ENST00000494655 SKIP12755 728 aa23.04■■□□□ 1.28
CCDC12-207ENST00000494655 UBA7P41226 1012 aa23.04■■□□□ 1.28
CCDC12-207ENST00000494655 DSC3Q14574 896 aa23.04■■□□□ 1.28
CCDC12-207ENST00000494655 IL17AQ16552 155 aa23.04■■□□□ 1.28
CCDC12-207ENST00000494655 MAEAQ7L5Y9 396 aa23.04■■□□□ 1.28
CCDC12-207ENST00000494655 ABI1Q8IZP0 508 aa23.04■■□□□ 1.28
CCDC12-207ENST00000494655 FBXO22Q8NEZ5 403 aa23.04■■□□□ 1.28
CCDC12-207ENST00000494655 CALML4Q96GE6 196 aa23.04■■□□□ 1.28
CCDC12-207ENST00000494655 LRRIQ4A6NIV6 560 aa23.03■■□□□ 1.28
CCDC12-207ENST00000494655 EYA4O95677 639 aa23.03■■□□□ 1.28
CCDC12-207ENST00000494655 CYP11B2P19099 503 aa23.03■■□□□ 1.28
CCDC12-207ENST00000494655 CDC25AP30304 524 aa23.03■■□□□ 1.28
CCDC12-207ENST00000494655 ARL2P36404 184 aa23.03■■□□□ 1.28
CCDC12-207ENST00000494655 LONP1P36776 959 aaKnown RBP23.03■■□□□ 1.28
CCDC12-207ENST00000494655 RAB27AP51159 221 aa23.03■■□□□ 1.28
CCDC12-207ENST00000494655 POU5F1BQ06416 359 aa23.03■■□□□ 1.28
CCDC12-207ENST00000494655 PPP2R5AQ15172 486 aa23.03■■□□□ 1.28
CCDC12-207ENST00000494655 ZBTB8OSQ8IWT0 167 aa23.03■■□□□ 1.28
CCDC12-207ENST00000494655 RC3H2Q9HBD1 1191 aaKnown RBP23.03■■□□□ 1.28
CCDC12-207ENST00000494655 AGPAT5Q9NUQ2 364 aa23.03■■□□□ 1.28
CCDC12-207ENST00000494655 CHD9Q3L8U1 2897 aa23.03■■□□□ 1.28
CCDC12-207ENST00000494655 INO80B-WBP1J3KQ70 363 aa23.02■■□□□ 1.28
CCDC12-207ENST00000494655 CTNNB1P35222 781 aa23.02■■□□□ 1.28
CCDC12-207ENST00000494655 CAPSQ13938 189 aa23.02■■□□□ 1.28
CCDC12-207ENST00000494655 PAN2Q504Q3 1202 aaKnown RBP23.02■■□□□ 1.28
CCDC12-207ENST00000494655 CABP7Q86V35 215 aa23.02■■□□□ 1.28
CCDC12-207ENST00000494655 RNF169Q8NCN4 708 aa23.02■■□□□ 1.28
CCDC12-207ENST00000494655 ASAP3Q8TDY4 903 aa23.02■■□□□ 1.28
CCDC12-207ENST00000494655 KIFAP3Q92845 792 aa23.02■■□□□ 1.28
CCDC12-207ENST00000494655 ZNF689Q96CS4 500 aaPredicted RBP23.02■■□□□ 1.28
CCDC12-207ENST00000494655 IFT74Q96LB3 600 aa23.02■■□□□ 1.28
CCDC12-207ENST00000494655 C17orf80Q9BSJ5 609 aa23.02■■□□□ 1.28
CCDC12-207ENST00000494655 GLRA2P23416 452 aa23.01■■□□□ 1.27
CCDC12-207ENST00000494655 TXLNAP40222 546 aa23.01■■□□□ 1.27
CCDC12-207ENST00000494655 PTENP60484 403 aa23.01■■□□□ 1.27
CCDC12-207ENST00000494655 BECN1Q14457 450 aa23.01■■□□□ 1.27
CCDC12-207ENST00000494655 ECM1Q16610 540 aa23.01■■□□□ 1.27
CCDC12-207ENST00000494655 SPRYD3Q8NCJ5 442 aa23.01■■□□□ 1.27
CCDC12-207ENST00000494655 ZNF396Q96N95 335 aaPredicted RBP23.01■■□□□ 1.27
CCDC12-207ENST00000494655 NFKBIZQ9BYH8 718 aa23.01■■□□□ 1.27
CCDC12-207ENST00000494655 C2orf40Q9H1Z8 148 aa23.01■■□□□ 1.27
CCDC12-207ENST00000494655 GPRC5CQ9NQ84 441 aa23.01■■□□□ 1.27
CCDC12-207ENST00000494655 CLIC4Q9Y696 253 aa23.01■■□□□ 1.27
CCDC12-207ENST00000494655 MYO9BQ13459 2157 aa23.01■■□□□ 1.27
CCDC12-207ENST00000494655 A0A0U1RQF3 1178 aa23■■□□□ 1.27
CCDC12-207ENST00000494655 E9PMD0 336 aa23■■□□□ 1.27
CCDC12-207ENST00000494655 SSBP05455 408 aaKnown RBP eCLIP23■■□□□ 1.27
CCDC12-207ENST00000494655 CEBPZQ03701 1054 aaKnown RBP23■■□□□ 1.27
CCDC12-207ENST00000494655 EPC2Q52LR7 807 aa23■■□□□ 1.27
CCDC12-207ENST00000494655 HYIQ5T013 277 aa23■■□□□ 1.27
CCDC12-207ENST00000494655 SPOUT1Q5T280 376 aaKnown RBP23■■□□□ 1.27
CCDC12-207ENST00000494655 ECHDC2Q86YB7 292 aa23■■□□□ 1.27
CCDC12-207ENST00000494655 TMEM192Q8IY95 271 aa23■■□□□ 1.27
CCDC12-207ENST00000494655 CRIPAKQ8N1N5 446 aa23■■□□□ 1.27
CCDC12-207ENST00000494655 GDPD5Q8WTR4 605 aa23■■□□□ 1.27
CCDC12-207ENST00000494655 RSPH1Q8WYR4 309 aa23■■□□□ 1.27
CCDC12-207ENST00000494655 DRC1Q96MC2 740 aa23■■□□□ 1.27
CCDC12-207ENST00000494655 MMTAG2Q9BU76 263 aaKnown RBP23■■□□□ 1.27
CCDC12-207ENST00000494655 C11orf84Q9BUA3 381 aaPredicted RBP23■■□□□ 1.27
CCDC12-207ENST00000494655 KIAA1671Q9BY89 1806 aa23■■□□□ 1.27
CCDC12-207ENST00000494655 FNDC1Q4ZHG4 1894 aaPredicted RBP23■■□□□ 1.27
CCDC12-207ENST00000494655 CDH23Q9H251 3354 aa23■■□□□ 1.27
CCDC12-207ENST00000494655 TBKBP1A7MCY6 615 aa22.99■■□□□ 1.27
CCDC12-207ENST00000494655 EOMESO95936 686 aa22.99■■□□□ 1.27
CCDC12-207ENST00000494655 AXLP30530 894 aa22.99■■□□□ 1.27
CCDC12-207ENST00000494655 FAM189BP81408 668 aa22.99■■□□□ 1.27
CCDC12-207ENST00000494655 PTPROQ16827 1216 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms