RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 ASAP2O43150 1006 aa17.43■□□□□ 0.38
LIMS2-216ENST00000494613 LYPLA2O95372 231 aa17.43■□□□□ 0.38
LIMS2-216ENST00000494613 LAMTOR4Q0VGL1 99 aa17.43■□□□□ 0.38
LIMS2-216ENST00000494613 LRRC55Q6ZSA7 311 aa17.43■□□□□ 0.38
LIMS2-216ENST00000494613 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.43■□□□□ 0.38
LIMS2-216ENST00000494613 NLRP4Q96MN2 994 aa17.43■□□□□ 0.38
LIMS2-216ENST00000494613 TMEM117Q9H0C3 514 aa17.43■□□□□ 0.38
LIMS2-216ENST00000494613 CWH43Q9H720 699 aa17.43■□□□□ 0.38
LIMS2-216ENST00000494613 AAASQ9NRG9 546 aa17.43■□□□□ 0.38
LIMS2-216ENST00000494613 ANKEF1Q9NU02 776 aa17.43■□□□□ 0.38
LIMS2-216ENST00000494613 DACT1Q9NYF0 836 aa17.43■□□□□ 0.38
LIMS2-216ENST00000494613 COL4A3BPQ9Y5P4 624 aa17.43■□□□□ 0.38
LIMS2-216ENST00000494613 XRCC6P12956 609 aaKnown RBP eCLIP17.42■□□□□ 0.38
LIMS2-216ENST00000494613 KCNA5P22460 613 aa17.42■□□□□ 0.38
LIMS2-216ENST00000494613 TECP42680 631 aa17.42■□□□□ 0.38
LIMS2-216ENST00000494613 LEXMQ3ZCV2 418 aa17.42■□□□□ 0.38
LIMS2-216ENST00000494613 ZNF598Q86UK7 904 aaKnown RBP17.42■□□□□ 0.38
LIMS2-216ENST00000494613 RNF169Q8NCN4 708 aa17.42■□□□□ 0.38
LIMS2-216ENST00000494613 POF1BQ8WVV4 589 aa17.42■□□□□ 0.38
LIMS2-216ENST00000494613 PSPC1Q8WXF1 523 aaKnown RBP17.42■□□□□ 0.38
LIMS2-216ENST00000494613 BMP2KQ9NSY1 1161 aaPredicted RBP17.42■□□□□ 0.38
LIMS2-216ENST00000494613 HCSTQ9UBK5 93 aa17.42■□□□□ 0.38
LIMS2-216ENST00000494613 TCF20Q9UGU0 1960 aaKnown RBP17.42■□□□□ 0.38
LIMS2-216ENST00000494613 COL4A4P53420 1690 aaPredicted RBP17.42■□□□□ 0.38
LIMS2-216ENST00000494613 HOXA2O43364 376 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 NCK2O43639 380 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 ST18O60284 1047 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 CSPG5O95196 566 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 SPATA31C1P0DKV0 1188 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 SFPQP23246 707 aaKnown RBP eCLIP17.41■□□□□ 0.38
LIMS2-216ENST00000494613 HYAL1Q12794 435 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 GNL2Q13823 731 aaKnown RBP17.41■□□□□ 0.38
LIMS2-216ENST00000494613 COL19A1Q14993 1142 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 EP400NLQ6ZTU2 488 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 CATSPER4Q7RTX7 472 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 SRGAP1Q7Z6B7 1085 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 FERMT3Q86UX7 667 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 NOSTRINQ8IVI9 506 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 PIGOQ8TEQ8 1089 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 TCP11Q8WWU5 503 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 PABPC5Q96DU9 382 aaKnown RBP17.41■□□□□ 0.38
LIMS2-216ENST00000494613 TRAIPQ9BWF2 469 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 IGFLR1Q9H665 355 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 MINDY3Q9H8M7 445 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 SPTBN5Q9NRC6 3674 aaKnown RBP17.41■□□□□ 0.38
LIMS2-216ENST00000494613 MYO7AQ13402 2215 aa17.41■□□□□ 0.38
LIMS2-216ENST00000494613 NLRC5Q86WI3 1866 aa17.4■□□□□ 0.38
LIMS2-216ENST00000494613 POTEMA6NI47 508 aa17.4■□□□□ 0.38
LIMS2-216ENST00000494613 GAS2O43903 313 aaKnown RBP17.4■□□□□ 0.38
LIMS2-216ENST00000494613 U2AF2P26368 475 aaKnown RBP eCLIP17.4■□□□□ 0.38
LIMS2-216ENST00000494613 GTF2F1P35269 517 aaKnown RBP eCLIP17.4■□□□□ 0.38
LIMS2-216ENST00000494613 IRS1P35568 1242 aa17.4■□□□□ 0.38
LIMS2-216ENST00000494613 PHKA2P46019 1235 aa17.4■□□□□ 0.38
LIMS2-216ENST00000494613 EMC2Q15006 297 aa17.4■□□□□ 0.38
LIMS2-216ENST00000494613 CTC1Q2NKJ3 1217 aa17.4■□□□□ 0.38
LIMS2-216ENST00000494613 CLLU1OSQ5K130 101 aa17.4■□□□□ 0.38
LIMS2-216ENST00000494613 CATSPER3Q86XQ3 398 aa17.4■□□□□ 0.38
LIMS2-216ENST00000494613 ABI1Q8IZP0 508 aa17.4■□□□□ 0.38
LIMS2-216ENST00000494613 C4orf32Q8N8J7 132 aa17.4■□□□□ 0.38
LIMS2-216ENST00000494613 COLGALT1Q8NBJ5 622 aa17.4■□□□□ 0.38
LIMS2-216ENST00000494613 NEK9Q8TD19 979 aa17.4■□□□□ 0.38
LIMS2-216ENST00000494613 MTRQ99707 1265 aa17.4■□□□□ 0.38
LIMS2-216ENST00000494613 UPF2Q9HAU5 1272 aaKnown RBP17.4■□□□□ 0.38
LIMS2-216ENST00000494613 XPNPEP1Q9NQW7 623 aa17.4■□□□□ 0.38
LIMS2-216ENST00000494613 H3BQ06 376 aaPredicted RBP17.39■□□□□ 0.37
LIMS2-216ENST00000494613 ZNF623O75123 536 aa17.39■□□□□ 0.37
LIMS2-216ENST00000494613 FGF18O76093 207 aa17.39■□□□□ 0.37
LIMS2-216ENST00000494613 ATF7P17544 494 aaPredicted RBP17.39■□□□□ 0.37
LIMS2-216ENST00000494613 HOXA11P31270 313 aaPredicted RBP17.39■□□□□ 0.37
LIMS2-216ENST00000494613 LTBRP36941 435 aa17.39■□□□□ 0.37
LIMS2-216ENST00000494613 ADAM15Q13444 863 aa17.39■□□□□ 0.37
LIMS2-216ENST00000494613 LONRF3Q496Y0 759 aa17.39■□□□□ 0.37
LIMS2-216ENST00000494613 TTC38Q5R3I4 469 aa17.39■□□□□ 0.37
LIMS2-216ENST00000494613 TWF2Q6IBS0 349 aaKnown RBP17.39■□□□□ 0.37
LIMS2-216ENST00000494613 RNF149Q8NC42 400 aa17.39■□□□□ 0.37
LIMS2-216ENST00000494613 HELQQ8TDG4 1101 aa17.39■□□□□ 0.37
LIMS2-216ENST00000494613 MICAL1Q8TDZ2 1067 aa17.39■□□□□ 0.37
LIMS2-216ENST00000494613 TMX3Q96JJ7 454 aa17.39■□□□□ 0.37
LIMS2-216ENST00000494613 CLDND1Q9NY35 253 aa17.39■□□□□ 0.37
LIMS2-216ENST00000494613 PIN4Q9Y237 131 aaKnown RBP17.39■□□□□ 0.37
LIMS2-216ENST00000494613 RALGAPA2Q2PPJ7 1873 aa17.39■□□□□ 0.37
LIMS2-216ENST00000494613 GRXCR2A6NFK2 248 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 MED24O75448 989 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 DGAT1O75907 488 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 CD2BP2O95400 341 aaKnown RBP17.38■□□□□ 0.37
LIMS2-216ENST00000494613 OR52Z1P0C646 297 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 SKIP12755 728 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 LAG3P18627 525 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 ARL2P36404 184 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 TRAPPC10P48553 1259 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 RARRES1P49788 294 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 TOB1P50616 345 aaPredicted RBP17.38■□□□□ 0.37
LIMS2-216ENST00000494613 ERVFC1P60507 584 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 ORC2Q13416 577 aaPredicted RBP17.38■□□□□ 0.37
LIMS2-216ENST00000494613 MXD4Q14582 209 aaPredicted RBP17.38■□□□□ 0.37
LIMS2-216ENST00000494613 CSPP1Q1MSJ5 1256 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 KCNT2Q6UVM3 1135 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 THNSL1Q8IYQ7 743 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 LPPQ93052 612 aa17.38■□□□□ 0.37
LIMS2-216ENST00000494613 POLR3CQ9BUI4 534 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms