RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 PUF60Q9UHX1 559 aaKnown RBP26.84■■□□□ 1.89
TTC3-224ENST00000494243 LOC730098B7Z3J9 87 aa26.83■■□□□ 1.89
TTC3-224ENST00000494243 DTNBO60941 627 aa26.83■■□□□ 1.89
TTC3-224ENST00000494243 HOXD11P31277 338 aaPredicted RBP26.83■■□□□ 1.89
TTC3-224ENST00000494243 DNM2P50570 870 aa26.83■■□□□ 1.89
TTC3-224ENST00000494243 PSMC5P62195 406 aa26.83■■□□□ 1.89
TTC3-224ENST00000494243 LETM2Q2VYF4 491 aa26.83■■□□□ 1.89
TTC3-224ENST00000494243 PLPP4Q5VZY2 271 aa26.83■■□□□ 1.89
TTC3-224ENST00000494243 HELQQ8TDG4 1101 aa26.83■■□□□ 1.89
TTC3-224ENST00000494243 TCF25Q9BQ70 676 aa26.83■■□□□ 1.89
TTC3-224ENST00000494243 GJB4Q9NTQ9 266 aa26.83■■□□□ 1.89
TTC3-224ENST00000494243 DACT1Q9NYF0 836 aa26.83■■□□□ 1.89
TTC3-224ENST00000494243 SPG21Q9NZD8 308 aa26.83■■□□□ 1.89
TTC3-224ENST00000494243 VAV3Q9UKW4 847 aa26.83■■□□□ 1.89
TTC3-224ENST00000494243 HIDE1A8MVS5 230 aa26.82■■□□□ 1.88
TTC3-224ENST00000494243 PPM1AP35813 382 aa26.82■■□□□ 1.88
TTC3-224ENST00000494243 PPP2R5CQ13362 524 aa26.82■■□□□ 1.88
TTC3-224ENST00000494243 PPP4R3AQ6IN85 833 aa26.82■■□□□ 1.88
TTC3-224ENST00000494243 SUSD6Q92537 303 aa26.82■■□□□ 1.88
TTC3-224ENST00000494243 TRAIPQ9BWF2 469 aa26.82■■□□□ 1.88
TTC3-224ENST00000494243 NGRNQ9NPE2 291 aaKnown RBP26.82■■□□□ 1.88
TTC3-224ENST00000494243 SUCLA2Q9P2R7 463 aaPredicted RBP26.82■■□□□ 1.88
TTC3-224ENST00000494243 TPCN1Q9ULQ1 816 aa26.82■■□□□ 1.88
TTC3-224ENST00000494243 FSD2A1L4K1 749 aa26.81■■□□□ 1.88
TTC3-224ENST00000494243 CBX2Q14781 532 aaPredicted RBP26.81■■□□□ 1.88
TTC3-224ENST00000494243 PLA2G4FQ68DD2 849 aa26.81■■□□□ 1.88
TTC3-224ENST00000494243 ZNF410Q86VK4 478 aa26.81■■□□□ 1.88
TTC3-224ENST00000494243 KSR1Q8IVT5 923 aa26.81■■□□□ 1.88
TTC3-224ENST00000494243 SLC39A11Q8N1S5 342 aa26.81■■□□□ 1.88
TTC3-224ENST00000494243 OXER1Q8TDS5 423 aa26.81■■□□□ 1.88
TTC3-224ENST00000494243 FAM20AQ96MK3 541 aa26.81■■□□□ 1.88
TTC3-224ENST00000494243 S1PR5Q9H228 398 aa26.81■■□□□ 1.88
TTC3-224ENST00000494243 SLKQ9H2G2 1235 aaPredicted RBP26.81■■□□□ 1.88
TTC3-224ENST00000494243 ENTPD7Q9NQZ7 604 aa26.81■■□□□ 1.88
TTC3-224ENST00000494243 STK36Q9NRP7 1315 aa26.81■■□□□ 1.88
TTC3-224ENST00000494243 CCDC194A0A1B0GVG4 234 aa26.8■■□□□ 1.88
TTC3-224ENST00000494243 PFKFB2O60825 505 aa26.8■■□□□ 1.88
TTC3-224ENST00000494243 CDKL5O76039 1030 aa26.8■■□□□ 1.88
TTC3-224ENST00000494243 CTDNEP1O95476 244 aa26.8■■□□□ 1.88
TTC3-224ENST00000494243 PHKA2P46019 1235 aa26.8■■□□□ 1.88
TTC3-224ENST00000494243 KRT17Q04695 432 aa26.8■■□□□ 1.88
TTC3-224ENST00000494243 HFE2Q6ZVN8 426 aa26.8■■□□□ 1.88
TTC3-224ENST00000494243 NEK8Q86SG6 692 aa26.8■■□□□ 1.88
TTC3-224ENST00000494243 RHPN2Q8IUC4 686 aa26.8■■□□□ 1.88
TTC3-224ENST00000494243 ZNF579Q8NAF0 562 aaKnown RBP26.8■■□□□ 1.88
TTC3-224ENST00000494243 HAS1Q92839 578 aa26.8■■□□□ 1.88
TTC3-224ENST00000494243 PHF7Q9BWX1 381 aaPredicted RBP26.8■■□□□ 1.88
TTC3-224ENST00000494243 CYP26B1Q9NR63 512 aa26.8■■□□□ 1.88
TTC3-224ENST00000494243 WRAP73Q9P2S5 460 aaPredicted RBP26.8■■□□□ 1.88
TTC3-224ENST00000494243 QARSP47897 775 aaKnown RBP26.79■■□□□ 1.88
TTC3-224ENST00000494243 NPEPPSP55786 919 aa26.79■■□□□ 1.88
TTC3-224ENST00000494243 EDAQ92838 391 aa26.79■■□□□ 1.88
TTC3-224ENST00000494243 GCFC2P16383 781 aaKnown RBP26.78■■□□□ 1.88
TTC3-224ENST00000494243 SFPQP23246 707 aaKnown RBP eCLIP26.78■■□□□ 1.885e-8■■■□□ 17.3
TTC3-224ENST00000494243 BCAR1P56945 870 aa26.78■■□□□ 1.88
TTC3-224ENST00000494243 EARS2Q5JPH6 523 aaKnown RBP26.78■■□□□ 1.88
TTC3-224ENST00000494243 ANKRD54Q6NXT1 300 aa26.78■■□□□ 1.88
TTC3-224ENST00000494243 SYCE2Q6PIF2 218 aa26.78■■□□□ 1.88
TTC3-224ENST00000494243 TMC7Q7Z402 723 aa26.78■■□□□ 1.88
TTC3-224ENST00000494243 MRPL43Q8N983 215 aaKnown RBP26.78■■□□□ 1.88
TTC3-224ENST00000494243 MRPL9Q9BYD2 267 aaKnown RBP26.78■■□□□ 1.88
TTC3-224ENST00000494243 INO80BQ9C086 356 aaPredicted RBP26.78■■□□□ 1.88
TTC3-224ENST00000494243 IFT122Q9HBG6 1241 aa26.78■■□□□ 1.88
TTC3-224ENST00000494243 NT5C1B-RDH14C9J2C7 533 aa26.77■■□□□ 1.88
TTC3-224ENST00000494243 TECP42680 631 aa26.77■■□□□ 1.88
TTC3-224ENST00000494243 TWF2Q6IBS0 349 aaKnown RBP26.77■■□□□ 1.88
TTC3-224ENST00000494243 PIK3AP1Q6ZUJ8 805 aa26.77■■□□□ 1.88
TTC3-224ENST00000494243 LPPQ93052 612 aa26.77■■□□□ 1.88
TTC3-224ENST00000494243 NLRP4Q96MN2 994 aa26.77■■□□□ 1.88
TTC3-224ENST00000494243 JPH2Q9BR39 696 aaPredicted RBP26.77■■□□□ 1.88
TTC3-224ENST00000494243 PIN4Q9Y237 131 aaKnown RBP26.77■■□□□ 1.88
TTC3-224ENST00000494243 MEIS3P2A8K0S8 358 aa26.76■■□□□ 1.87
TTC3-224ENST00000494243 TBX3O15119 743 aa26.76■■□□□ 1.87
TTC3-224ENST00000494243 CCNT1O60563 726 aaKnown RBP26.76■■□□□ 1.87
TTC3-224ENST00000494243 ZNF623O75123 536 aa26.76■■□□□ 1.87
TTC3-224ENST00000494243 P4HBP07237 508 aaKnown RBP26.76■■□□□ 1.87
TTC3-224ENST00000494243 XBP1P17861 261 aa26.76■■□□□ 1.87
TTC3-224ENST00000494243 LONRF3Q496Y0 759 aa26.76■■□□□ 1.87
TTC3-224ENST00000494243 LLGL2Q6P1M3 1020 aa26.76■■□□□ 1.87
TTC3-224ENST00000494243 RPGRIP1Q96KN7 1286 aa26.76■■□□□ 1.87
TTC3-224ENST00000494243 DHX33Q9H6R0 707 aaKnown RBP26.76■■□□□ 1.87
TTC3-224ENST00000494243 FAM105AQ9NUU6 356 aa26.76■■□□□ 1.87
TTC3-224ENST00000494243 C2orf71A6NGG8 1288 aa26.75■■□□□ 1.87
TTC3-224ENST00000494243 FDPSP14324 419 aaKnown RBP26.75■■□□□ 1.87
TTC3-224ENST00000494243 ALDH7A1P49419 539 aaKnown RBP26.75■■□□□ 1.87
TTC3-224ENST00000494243 CATSPER4Q7RTX7 472 aa26.75■■□□□ 1.87
TTC3-224ENST00000494243 CEP170P1Q96L14 293 aa26.75■■□□□ 1.87
TTC3-224ENST00000494243 RGL1Q9NZL6 768 aa26.75■■□□□ 1.87
TTC3-224ENST00000494243 ORC3Q9UBD5 711 aaPredicted RBP26.75■■□□□ 1.87
TTC3-224ENST00000494243 TECTAO75443 2155 aa26.75■■□□□ 1.87
TTC3-224ENST00000494243 MUC6Q6W4X9 2439 aa26.75■■□□□ 1.87
TTC3-224ENST00000494243 FAM205CA6NFA0 338 aa26.74■■□□□ 1.87
TTC3-224ENST00000494243 DKC1O60832 514 aaKnown RBP eCLIP26.74■■□□□ 1.87
TTC3-224ENST00000494243 SRGAP2BP0DMP2 458 aa26.74■■□□□ 1.87
TTC3-224ENST00000494243 SKIP12755 728 aa26.74■■□□□ 1.87
TTC3-224ENST00000494243 SPIRE1Q08AE8 756 aa26.74■■□□□ 1.87
TTC3-224ENST00000494243 SMC1AQ14683 1233 aaKnown RBP26.74■■□□□ 1.87
TTC3-224ENST00000494243 EPHA7Q15375 998 aa26.74■■□□□ 1.87
TTC3-224ENST00000494243 TMEM173Q86WV6 379 aaPredicted RBP26.74■■□□□ 1.87
TTC3-224ENST00000494243 POTEDQ86YR6 584 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms