RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 TMEM60Q9H2L4 133 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 TBK1Q9UHD2 729 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 IPO11Q9UI26 975 aaKnown RBP12.54□□□□□ -0.4
COL25A1-204ENST00000494183 SRGAP2O75044 1071 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 DGAT1O75907 488 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 CTDNEP1O95476 244 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 HOXD10P28358 340 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 TSTA3Q13630 321 aaPredicted RBP12.53□□□□□ -0.4
COL25A1-204ENST00000494183 FAM71BQ8TC56 605 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 TMEM143Q96AN5 459 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 ATG4CQ96DT6 458 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 ZMYND12Q9H0C1 365 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 RASSF4Q9H2L5 321 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 TUFT1Q9NNX1 390 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 FRMPD1Q5SYB0 1578 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 SRGAP2BP0DMP2 458 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 DR1Q01658 176 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 DUOXA2Q1HG44 320 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 ARL13BQ3SXY8 428 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 MUM1L1Q5H9M0 696 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 GLYCTKQ8IVS8 523 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 FBXL13Q8NEE6 735 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 AGBL3Q8NEM8 1001 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 FAM217BQ9NTX9 383 aaPredicted RBP12.53□□□□□ -0.4
COL25A1-204ENST00000494183 GARSP41250 739 aaKnown RBP12.53□□□□□ -0.4
COL25A1-204ENST00000494183 HDLBPQ00341 1268 aaKnown RBP12.53□□□□□ -0.4
COL25A1-204ENST00000494183 PDIK1LQ8N165 341 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 LRRC8CQ8TDW0 803 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 ATP8B3O60423 1300 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 CNTNAP5Q8WYK1 1306 aa12.53□□□□□ -0.4
COL25A1-204ENST00000494183 FTLP02792 175 aaPredicted RBP12.52□□□□□ -0.4
COL25A1-204ENST00000494183 SRGNP10124 158 aa12.52□□□□□ -0.4
COL25A1-204ENST00000494183 ZNF157P51786 506 aaPredicted RBP12.52□□□□□ -0.4
COL25A1-204ENST00000494183 RWDD4Q6NW29 188 aaKnown RBP12.52□□□□□ -0.4
COL25A1-204ENST00000494183 KCNV1Q6PIU1 500 aa12.52□□□□□ -0.4
COL25A1-204ENST00000494183 FMO2Q99518 471 aa12.52□□□□□ -0.4
COL25A1-204ENST00000494183 PDXKO00764 312 aa12.52□□□□□ -0.41
COL25A1-204ENST00000494183 GRIN3BO60391 1043 aa12.52□□□□□ -0.41
COL25A1-204ENST00000494183 SNAPC2Q13487 334 aa12.52□□□□□ -0.41
COL25A1-204ENST00000494183 ACER1Q8TDN7 264 aa12.52□□□□□ -0.41
COL25A1-204ENST00000494183 PCSK1NQ9UHG2 260 aa12.52□□□□□ -0.41
COL25A1-204ENST00000494183 C6orf222P0C671 652 aaPredicted RBP12.52□□□□□ -0.41
COL25A1-204ENST00000494183 GPD1LQ8N335 351 aa12.52□□□□□ -0.41
COL25A1-204ENST00000494183 INTS2Q9H0H0 1204 aaKnown RBP12.52□□□□□ -0.41
COL25A1-204ENST00000494183 EFCC1Q9HA90 598 aa12.52□□□□□ -0.41
COL25A1-204ENST00000494183 BAIAP2L1Q9UHR4 511 aa12.52□□□□□ -0.41
COL25A1-204ENST00000494183 HPS5Q9UPZ3 1129 aa12.52□□□□□ -0.41
COL25A1-204ENST00000494183 KDM6AO15550 1401 aaPredicted RBP12.52□□□□□ -0.41
COL25A1-204ENST00000494183 CTNND1O60716 968 aaKnown RBP12.52□□□□□ -0.41
COL25A1-204ENST00000494183 CYP2B6P20813 491 aa12.52□□□□□ -0.41
COL25A1-204ENST00000494183 RPS12P25398 132 aaKnown RBP12.52□□□□□ -0.41
COL25A1-204ENST00000494183 MSH2P43246 934 aa12.52□□□□□ -0.41
COL25A1-204ENST00000494183 RASSF2P50749 326 aa12.52□□□□□ -0.41
COL25A1-204ENST00000494183 THEM5Q8N1Q8 247 aa12.52□□□□□ -0.41
COL25A1-204ENST00000494183 ZKSCAN4Q969J2 545 aaPredicted RBP12.52□□□□□ -0.41
COL25A1-204ENST00000494183 STK38LQ9Y2H1 464 aa12.52□□□□□ -0.41
COL25A1-204ENST00000494183 ESYT2A0FGR8 921 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 MYMKA6NI61 221 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 TBX3O15119 743 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 UBE4BO95155 1302 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 TBXAS1P24557 533 aaPredicted RBP12.51□□□□□ -0.41
COL25A1-204ENST00000494183 GNA15P30679 374 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 ACOT2P49753 483 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 EFNA5P52803 228 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 HUNKP57058 714 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 PDS5AQ29RF7 1337 aaKnown RBP12.51□□□□□ -0.41
COL25A1-204ENST00000494183 WDR72Q3MJ13 1102 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 MYLK4Q86YV6 388 aaPredicted RBP12.51□□□□□ -0.41
COL25A1-204ENST00000494183 KIF12Q96FN5 646 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 REEP2Q9BRK0 252 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 DIP2BQ9P265 1576 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 MIF4GDA9UHW6 222 aaKnown RBP12.51□□□□□ -0.41
COL25A1-204ENST00000494183 UBE2Q2LH0YL09 131 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 RPS6P62753 249 aaKnown RBP12.51□□□□□ -0.41
COL25A1-204ENST00000494183 SEMA3FQ13275 785 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 ZKSCAN8Q15776 578 aaPredicted RBP12.51□□□□□ -0.41
COL25A1-204ENST00000494183 DHX40Q8IX18 779 aaKnown RBP12.51□□□□□ -0.41
COL25A1-204ENST00000494183 DPF2Q92785 391 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 RNF25Q96BH1 459 aaPredicted RBP12.51□□□□□ -0.41
COL25A1-204ENST00000494183 KIF9Q9HAQ2 790 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 HEY1Q9Y5J3 304 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 ADGRG1Q9Y653 693 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 ADGRB1O14514 1584 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 CCDC188H7C350 402 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 GPC4O75487 556 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 PCK1P35558 622 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 PCGF5Q86SE9 256 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 OR6J1Q8NGC5 347 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 SUCLA2Q9P2R7 463 aaPredicted RBP12.51□□□□□ -0.41
COL25A1-204ENST00000494183 NFU1Q9UMS0 254 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 SNX24Q9Y343 169 aa12.51□□□□□ -0.41
COL25A1-204ENST00000494183 CIITAP33076 1130 aa12.5□□□□□ -0.41
COL25A1-204ENST00000494183 EPHB1P54762 984 aa12.5□□□□□ -0.41
COL25A1-204ENST00000494183 ANKRD13AQ8IZ07 590 aa12.5□□□□□ -0.41
COL25A1-204ENST00000494183 ADSSL1Q8N142 457 aa12.5□□□□□ -0.41
COL25A1-204ENST00000494183 PPP1R12CQ9BZL4 782 aa12.5□□□□□ -0.41
COL25A1-204ENST00000494183 ARHGAP42A6NI28 874 aa12.5□□□□□ -0.41
COL25A1-204ENST00000494183 A8MXQ7 604 aa12.5□□□□□ -0.41
COL25A1-204ENST00000494183 FGFR2P21802 821 aa12.5□□□□□ -0.41
COL25A1-204ENST00000494183 PSMC1P62191 440 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms