RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 LOC100289279A0A1B0GTE1 492 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 TMEM232C9JQI7 657 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 LAD1O00515 517 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 ALX3O95076 343 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 HLA-DOAP06340 250 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 TPM2P07951 284 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 SKILP12757 684 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 EEF2P13639 858 aaKnown RBP6.75□□□□□ -1.33
CPSF7-213ENST00000494016 ZNF16P17020 682 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-213ENST00000494016 EIF4BP23588 611 aaKnown RBP6.75□□□□□ -1.33
CPSF7-213ENST00000494016 RBM5P52756 815 aaKnown RBP eCLIP6.75□□□□□ -1.33
CPSF7-213ENST00000494016 DAB2P98082 770 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 TCP10Q12799 353 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 TBX2Q13207 712 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-213ENST00000494016 NR1I3Q14994 352 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 KARSQ15046 597 aaKnown RBP6.75□□□□□ -1.33
CPSF7-213ENST00000494016 NONOQ15233 471 aaKnown RBP eCLIP6.75□□□□□ -1.33
CPSF7-213ENST00000494016 CERKLQ49MI3 558 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-213ENST00000494016 SOGA3Q5TF21 947 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 SPATA1Q5VX52 437 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 JAKMIP3Q5VZ66 844 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 VSTM4Q8IW00 320 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 AGGF1Q8N302 714 aaeCLIP6.75□□□□□ -1.33
CPSF7-213ENST00000494016 SUPT20HQ8NEM7 779 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 TBCKQ8TEA7 893 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 CCDC12Q8WUD4 166 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-213ENST00000494016 MTMR9Q96QG7 549 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 GMLQ99445 158 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 SSBP4Q9BWG4 385 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-213ENST00000494016 BLZF1Q9H2G9 400 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 TMX1Q9H3N1 280 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 SEMA6BQ9H3T3 888 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 TDRD3Q9H7E2 651 aaKnown RBP6.75□□□□□ -1.33
CPSF7-213ENST00000494016 SAMSN1Q9NSI8 373 aaKnown RBP6.75□□□□□ -1.33
CPSF7-213ENST00000494016 RNF181Q9P0P0 153 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 PI4KBQ9UBF8 816 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 PPM1HQ9ULR3 514 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 PSME4Q14997 1843 aa6.75□□□□□ -1.33
CPSF7-213ENST00000494016 COL4A5P29400 1685 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 KRTAP4-8A0A0G2JLE6 195 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 MEGF11A6BM72 1044 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 hCG_1984214I3L0E3 225 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 MPHOSPH10O00566 681 aaKnown RBP6.74□□□□□ -1.33
CPSF7-213ENST00000494016 CBFA2T2O43439 604 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 KLRC4O43908 158 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 CCNT1O60563 726 aaKnown RBP6.74□□□□□ -1.33
CPSF7-213ENST00000494016 ENTPD3O75355 529 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 SERPINC1P01008 464 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 RPN1P04843 607 aaKnown RBP6.74□□□□□ -1.33
CPSF7-213ENST00000494016 CYP11A1P05108 521 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 VIL1P09327 827 aaKnown RBP6.74□□□□□ -1.33
CPSF7-213ENST00000494016 USP17L7P0C7H9 530 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 SLC16A2P36021 539 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 GSDMDP57764 484 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 SEPT2Q15019 361 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 PTPN21Q16825 1174 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 LETM2Q2VYF4 491 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 CFAP100Q494V2 611 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 CDKAL1Q5VV42 579 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 RRAGBQ5VZM2 374 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 KCTD1Q719H9 257 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 NEK8Q86SG6 692 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 ZNF713Q8N859 430 aaPredicted RBP6.74□□□□□ -1.33
CPSF7-213ENST00000494016 SMC1BQ8NDV3 1235 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 MICAL1Q8TDZ2 1067 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 MEGF10Q96KG7 1140 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 PYM1Q9BRP8 204 aaKnown RBP6.74□□□□□ -1.33
CPSF7-213ENST00000494016 MMTAG2Q9BU76 263 aaKnown RBP6.74□□□□□ -1.33
CPSF7-213ENST00000494016 KANSL2Q9H9L4 492 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 RIC8AQ9NPQ8 531 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 DISC1Q9NRI5 854 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 TMEM39AQ9NV64 488 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 KBTBD4Q9NVX7 518 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 SEC63Q9UGP8 760 aaKnown RBP6.74□□□□□ -1.33
CPSF7-213ENST00000494016 NFE2L3Q9Y4A8 694 aa6.74□□□□□ -1.33
CPSF7-213ENST00000494016 LRRC10BA6NIK2 292 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 USP27XA6NNY8 438 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 ZBTB5O15062 677 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 TEX33O43247 280 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 PPIP5K2O43314 1243 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 DLGAP3O95886 979 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 OR52Z1P0C646 297 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 PBX1P40424 430 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 UBA7P41226 1012 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 ZNF157P51786 506 aaPredicted RBP6.73□□□□□ -1.33
CPSF7-213ENST00000494016 ADCY7P51828 1080 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 STX17P56962 302 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 PPP2R3AQ06190 1150 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 PSMD2Q13200 908 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 AP3B2Q13367 1082 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 ORC2Q13416 577 aaPredicted RBP6.73□□□□□ -1.33
CPSF7-213ENST00000494016 KCNB1Q14721 858 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 POU4F3Q15319 338 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 HSP90AA4PQ58FG1 418 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 GPATCH4Q5T3I0 446 aaKnown RBP6.73□□□□□ -1.33
CPSF7-213ENST00000494016 ZNF658Q5TYW1 1059 aaPredicted RBP6.73□□□□□ -1.33
CPSF7-213ENST00000494016 E4F1Q66K89 784 aaPredicted RBP6.73□□□□□ -1.33
CPSF7-213ENST00000494016 SLFN13Q68D06 897 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 CABP7Q86V35 215 aa6.73□□□□□ -1.33
CPSF7-213ENST00000494016 SMYD4Q8IYR2 804 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms