RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 DLX2Q07687 328 aaPredicted RBP14.11□□□□□ -0.15
HSPG2-212ENST00000493940 TRIM29Q14134 588 aa14.11□□□□□ -0.15
HSPG2-212ENST00000493940 ECM1Q16610 540 aa14.11□□□□□ -0.15
HSPG2-212ENST00000493940 LONRF3Q496Y0 759 aa14.11□□□□□ -0.15
HSPG2-212ENST00000493940 XKR9Q5GH70 373 aa14.11□□□□□ -0.15
HSPG2-212ENST00000493940 ADGRD2Q7Z7M1 963 aa14.11□□□□□ -0.15
HSPG2-212ENST00000493940 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.11□□□□□ -0.15
HSPG2-212ENST00000493940 PIGOQ8TEQ8 1089 aa14.11□□□□□ -0.15
HSPG2-212ENST00000493940 PRPF31Q8WWY3 499 aaKnown RBP14.11□□□□□ -0.15
HSPG2-212ENST00000493940 UBE2ZQ9H832 354 aaPredicted RBP14.11□□□□□ -0.15
HSPG2-212ENST00000493940 CD320Q9NPF0 282 aa14.11□□□□□ -0.15
HSPG2-212ENST00000493940 SH2B1Q9NRF2 756 aaPredicted RBP14.11□□□□□ -0.15
HSPG2-212ENST00000493940 TMEM161AQ9NX61 479 aa14.11□□□□□ -0.15
HSPG2-212ENST00000493940 TRIOO75962 3097 aa14.11□□□□□ -0.15
HSPG2-212ENST00000493940 LINC01565O15544 149 aa14.1□□□□□ -0.15
HSPG2-212ENST00000493940 PBX3P40426 434 aa14.1□□□□□ -0.15
HSPG2-212ENST00000493940 HYAL1Q12794 435 aa14.1□□□□□ -0.15
HSPG2-212ENST00000493940 COL19A1Q14993 1142 aa14.1□□□□□ -0.15
HSPG2-212ENST00000493940 KHSRPQ92945 711 aaKnown RBP eCLIP14.1□□□□□ -0.15
HSPG2-212ENST00000493940 LPPQ93052 612 aa14.1□□□□□ -0.15
HSPG2-212ENST00000493940 P2RX5Q93086 422 aa14.1□□□□□ -0.15
HSPG2-212ENST00000493940 TMX3Q96JJ7 454 aa14.1□□□□□ -0.15
HSPG2-212ENST00000493940 NLRP4Q96MN2 994 aa14.1□□□□□ -0.15
HSPG2-212ENST00000493940 FOXP1Q9H334 677 aaPredicted RBP14.1□□□□□ -0.15
HSPG2-212ENST00000493940 ELAC1Q9H777 363 aaKnown RBP14.1□□□□□ -0.15
HSPG2-212ENST00000493940 ZSWIM4Q9H7M6 989 aa14.1□□□□□ -0.15
HSPG2-212ENST00000493940 A0A0U1RQF3 1178 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 LYPLA2O95372 231 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 SRGAP2CP0DJJ0 459 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 KCNA5P22460 613 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 U2AF2P26368 475 aaKnown RBP eCLIP14.09□□□□□ -0.15
HSPG2-212ENST00000493940 HOXA11P31270 313 aaPredicted RBP14.09□□□□□ -0.15
HSPG2-212ENST00000493940 TECP42680 631 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 AFF1P51825 1210 aaKnown RBP14.09□□□□□ -0.15
HSPG2-212ENST00000493940 LAMTOR4Q0VGL1 99 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 EMC2Q15006 297 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 RABEP1Q15276 862 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 IL17AQ16552 155 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 ODR4Q5SWX8 454 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 FERMT3Q86UX7 667 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 CATSPER3Q86XQ3 398 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 COLGALT1Q8NBJ5 622 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 ASAP3Q8TDY4 903 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 POF1BQ8WVV4 589 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 TBC1D32Q96NH3 1257 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 SCLT1Q96NL6 688 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 C11orf84Q9BUA3 381 aaPredicted RBP14.09□□□□□ -0.15
HSPG2-212ENST00000493940 PLVAPQ9BX97 442 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 GCOM2Q9BZD3 368 aaPredicted RBP14.09□□□□□ -0.15
HSPG2-212ENST00000493940 NSUN3Q9H649 340 aaKnown RBP14.09□□□□□ -0.15
HSPG2-212ENST00000493940 EPHX3Q9H6B9 360 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 ATP6V0A4Q9HBG4 840 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 PCDHB6Q9Y5E3 794 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 COL4A3BPQ9Y5P4 624 aa14.09□□□□□ -0.15
HSPG2-212ENST00000493940 H3BQ06 376 aaPredicted RBP14.08□□□□□ -0.16
HSPG2-212ENST00000493940 B4GALT3O60512 393 aa14.08□□□□□ -0.16
HSPG2-212ENST00000493940 ZSCAN20P17040 1043 aaPredicted RBP14.08□□□□□ -0.16
HSPG2-212ENST00000493940 HOXD11P31277 338 aaPredicted RBP14.08□□□□□ -0.16
HSPG2-212ENST00000493940 RARRES1P49788 294 aa14.08□□□□□ -0.16
HSPG2-212ENST00000493940 DNM2P50570 870 aa14.08□□□□□ -0.16
HSPG2-212ENST00000493940 POLGP54098 1239 aaPredicted RBP14.08□□□□□ -0.16
HSPG2-212ENST00000493940 ERVFC1P60507 584 aa14.08□□□□□ -0.16
HSPG2-212ENST00000493940 HMGN5P82970 282 aaKnown RBP14.08□□□□□ -0.16
HSPG2-212ENST00000493940 RBM10P98175 930 aaKnown RBP14.08□□□□□ -0.16
HSPG2-212ENST00000493940 PTPROQ16827 1216 aa14.08□□□□□ -0.16
HSPG2-212ENST00000493940 CTC1Q2NKJ3 1217 aa14.08□□□□□ -0.16
HSPG2-212ENST00000493940 TTC38Q5R3I4 469 aa14.08□□□□□ -0.16
HSPG2-212ENST00000493940 UBXN11Q5T124 520 aa14.08□□□□□ -0.16
HSPG2-212ENST00000493940 ZNF410Q86VK4 478 aa14.08□□□□□ -0.16
HSPG2-212ENST00000493940 NOSTRINQ8IVI9 506 aa14.08□□□□□ -0.16
HSPG2-212ENST00000493940 RNF169Q8NCN4 708 aa14.08□□□□□ -0.16
HSPG2-212ENST00000493940 NEK9Q8TD19 979 aa14.08□□□□□ -0.16
HSPG2-212ENST00000493940 HELQQ8TDG4 1101 aa14.08□□□□□ -0.16
HSPG2-212ENST00000493940 LRFN3Q9BTN0 628 aa14.08□□□□□ -0.16
HSPG2-212ENST00000493940 POLD4Q9HCU8 107 aa14.08□□□□□ -0.16
HSPG2-212ENST00000493940 MYO10Q9HD67 2058 aa14.07□□□□□ -0.16
HSPG2-212ENST00000493940 IL9P15248 144 aa14.07□□□□□ -0.16
HSPG2-212ENST00000493940 ARL2P36404 184 aa14.07□□□□□ -0.16
HSPG2-212ENST00000493940 RFC5P40937 340 aa14.07□□□□□ -0.16
HSPG2-212ENST00000493940 PHKA2P46019 1235 aa14.07□□□□□ -0.16
HSPG2-212ENST00000493940 SAFBQ15424 915 aaKnown RBP eCLIP14.07□□□□□ -0.16
HSPG2-212ENST00000493940 OTUD6AQ7L8S5 288 aa14.07□□□□□ -0.16
HSPG2-212ENST00000493940 FAM184AQ8NB25 1140 aa14.07□□□□□ -0.16
HSPG2-212ENST00000493940 SLC7A3Q8WY07 619 aa14.07□□□□□ -0.16
HSPG2-212ENST00000493940 TMEM117Q9H0C3 514 aa14.07□□□□□ -0.16
HSPG2-212ENST00000493940 IGFLR1Q9H665 355 aa14.07□□□□□ -0.16
HSPG2-212ENST00000493940 GPRC5CQ9NQ84 441 aa14.07□□□□□ -0.16
HSPG2-212ENST00000493940 RWDD3Q9Y3V2 267 aa14.07□□□□□ -0.16
HSPG2-212ENST00000493940 NT5C1B-RDH14C9J2C7 533 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 DKC1O60832 514 aaKnown RBP eCLIP14.06□□□□□ -0.16
HSPG2-212ENST00000493940 TBX10O75333 385 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 FGF18O76093 207 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 GLRA2P23416 452 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 CAPSQ13938 189 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 AMHR2Q16671 573 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 LEXMQ3ZCV2 418 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 TIGD5Q53EQ6 642 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 NAALADL2Q58DX5 795 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 SPOUT1Q5T280 376 aaKnown RBP14.06□□□□□ -0.16
HSPG2-212ENST00000493940 POTEGQ6S5H5 508 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms