RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 IGSF22Q8N9C0 903 aa25.21■■□□□ 1.63
SNIP1-203ENST00000493916 NACC1Q96RE7 527 aa25.21■■□□□ 1.63
SNIP1-203ENST00000493916 RAB34Q9BZG1 259 aa25.21■■□□□ 1.63
SNIP1-203ENST00000493916 CHST12Q9NRB3 414 aa25.21■■□□□ 1.63
SNIP1-203ENST00000493916 STK24Q9Y6E0 443 aa25.21■■□□□ 1.63
SNIP1-203ENST00000493916 MYO9BQ13459 2157 aa25.2■■□□□ 1.62
SNIP1-203ENST00000493916 H3BNC9 293 aa25.2■■□□□ 1.62
SNIP1-203ENST00000493916 RB1P06400 928 aa25.2■■□□□ 1.62
SNIP1-203ENST00000493916 MXD4Q14582 209 aaPredicted RBP25.2■■□□□ 1.62
SNIP1-203ENST00000493916 POTEGQ6S5H5 508 aa25.2■■□□□ 1.62
SNIP1-203ENST00000493916 PPM1EQ8WY54 764 aa25.2■■□□□ 1.62
SNIP1-203ENST00000493916 INTS4Q96HW7 963 aaKnown RBP25.2■■□□□ 1.62
SNIP1-203ENST00000493916 DACT1Q9NYF0 836 aa25.2■■□□□ 1.62
SNIP1-203ENST00000493916 LRWD1Q9UFC0 647 aa25.2■■□□□ 1.62
SNIP1-203ENST00000493916 PDCP20941 246 aa25.19■■□□□ 1.62
SNIP1-203ENST00000493916 CTNNB1P35222 781 aa25.19■■□□□ 1.62
SNIP1-203ENST00000493916 BMPR1AP36894 532 aa25.19■■□□□ 1.62
SNIP1-203ENST00000493916 CCDC85BQ15834 202 aaPredicted RBP25.19■■□□□ 1.62
SNIP1-203ENST00000493916 SRGAP1Q7Z6B7 1085 aa25.19■■□□□ 1.62
SNIP1-203ENST00000493916 MICALL1Q8N3F8 863 aa25.19■■□□□ 1.62
SNIP1-203ENST00000493916 TRAIPQ9BWF2 469 aa25.19■■□□□ 1.62
SNIP1-203ENST00000493916 MRPL42Q9Y6G3 142 aaKnown RBP25.19■■□□□ 1.62
SNIP1-203ENST00000493916 A0A0C4DFX4 3053 aa25.19■■□□□ 1.62
SNIP1-203ENST00000493916 K7ELQ4 463 aaPredicted RBP25.18■■□□□ 1.62
SNIP1-203ENST00000493916 SRGAP2CP0DJJ0 459 aa25.18■■□□□ 1.62
SNIP1-203ENST00000493916 ARL2P36404 184 aa25.18■■□□□ 1.62
SNIP1-203ENST00000493916 GATMP50440 423 aa25.18■■□□□ 1.62
SNIP1-203ENST00000493916 ATP2C1P98194 919 aaPredicted RBP25.18■■□□□ 1.62
SNIP1-203ENST00000493916 BRAPQ7Z569 592 aa25.18■■□□□ 1.62
SNIP1-203ENST00000493916 ECHDC2Q86YB7 292 aa25.18■■□□□ 1.62
SNIP1-203ENST00000493916 RNF149Q8NC42 400 aa25.18■■□□□ 1.62
SNIP1-203ENST00000493916 A0A087WWV3 80 aa25.17■■□□□ 1.62
SNIP1-203ENST00000493916 A0A0U1RQF3 1178 aa25.17■■□□□ 1.62
SNIP1-203ENST00000493916 HOXA2O43364 376 aa25.17■■□□□ 1.62
SNIP1-203ENST00000493916 IBSPP21815 317 aaPredicted RBP25.17■■□□□ 1.62
SNIP1-203ENST00000493916 CCT6AP40227 531 aaKnown RBP25.17■■□□□ 1.62
SNIP1-203ENST00000493916 POU5F1BQ06416 359 aa25.17■■□□□ 1.62
SNIP1-203ENST00000493916 GPM6BQ13491 265 aa25.17■■□□□ 1.62
SNIP1-203ENST00000493916 IL17AQ16552 155 aa25.17■■□□□ 1.62
SNIP1-203ENST00000493916 PAN2Q504Q3 1202 aaKnown RBP25.17■■□□□ 1.62
SNIP1-203ENST00000493916 FAM102BQ5T8I3 360 aa25.17■■□□□ 1.62
SNIP1-203ENST00000493916 DTHD1Q6ZMT9 781 aa25.17■■□□□ 1.62
SNIP1-203ENST00000493916 CATSPER4Q7RTX7 472 aa25.17■■□□□ 1.62
SNIP1-203ENST00000493916 C11orf84Q9BUA3 381 aaPredicted RBP25.17■■□□□ 1.62
SNIP1-203ENST00000493916 PLVAPQ9BX97 442 aa25.17■■□□□ 1.62
SNIP1-203ENST00000493916 AGPAT5Q9NUQ2 364 aa25.17■■□□□ 1.62
SNIP1-203ENST00000493916 USO1O60763 962 aaKnown RBP25.16■■□□□ 1.62
SNIP1-203ENST00000493916 PHKA2P46019 1235 aa25.16■■□□□ 1.62
SNIP1-203ENST00000493916 TFDP1Q14186 410 aa25.16■■□□□ 1.62
SNIP1-203ENST00000493916 PCBP1Q15365 356 aaKnown RBP eCLIP25.16■■□□□ 1.62
SNIP1-203ENST00000493916 PTPROQ16827 1216 aa25.16■■□□□ 1.62
SNIP1-203ENST00000493916 ZNF598Q86UK7 904 aaKnown RBP25.16■■□□□ 1.62
SNIP1-203ENST00000493916 IFNLR1Q8IU57 520 aaPredicted RBP25.16■■□□□ 1.62
SNIP1-203ENST00000493916 MCPH1Q8NEM0 835 aa25.16■■□□□ 1.62
SNIP1-203ENST00000493916 ASAP3Q8TDY4 903 aa25.16■■□□□ 1.62
SNIP1-203ENST00000493916 SNX21Q969T3 373 aa25.16■■□□□ 1.62
SNIP1-203ENST00000493916 MRPL38Q96DV4 380 aaKnown RBP25.16■■□□□ 1.62
SNIP1-203ENST00000493916 MINDY3Q9H8M7 445 aa25.16■■□□□ 1.62
SNIP1-203ENST00000493916 PIN4Q9Y237 131 aaKnown RBP25.16■■□□□ 1.62
SNIP1-203ENST00000493916 KIAA1671Q9BY89 1806 aa25.16■■□□□ 1.62
SNIP1-203ENST00000493916 FNDC1Q4ZHG4 1894 aaPredicted RBP25.15■■□□□ 1.62
SNIP1-203ENST00000493916 TBKBP1A7MCY6 615 aa25.15■■□□□ 1.62
SNIP1-203ENST00000493916 EOMESO95936 686 aa25.15■■□□□ 1.62
SNIP1-203ENST00000493916 FGFR1P11362 822 aa25.15■■□□□ 1.62
SNIP1-203ENST00000493916 PTENP60484 403 aa25.15■■□□□ 1.62
SNIP1-203ENST00000493916 ECM1Q16610 540 aa25.15■■□□□ 1.62
SNIP1-203ENST00000493916 SNX29Q8TEQ0 813 aa25.15■■□□□ 1.62
SNIP1-203ENST00000493916 NFKBIZQ9BYH8 718 aa25.15■■□□□ 1.62
SNIP1-203ENST00000493916 TMEM117Q9H0C3 514 aa25.15■■□□□ 1.62
SNIP1-203ENST00000493916 POLR3FQ9H1D9 316 aaPredicted RBP25.15■■□□□ 1.62
SNIP1-203ENST00000493916 RNF19AQ9NV58 838 aa25.15■■□□□ 1.62
SNIP1-203ENST00000493916 VPS37CA5D8V6 355 aaPredicted RBP25.14■■□□□ 1.62
SNIP1-203ENST00000493916 ARHGEF35A5YM69 484 aa25.14■■□□□ 1.62
SNIP1-203ENST00000493916 GLRA2P23416 452 aa25.14■■□□□ 1.62
SNIP1-203ENST00000493916 CAPSQ13938 189 aa25.14■■□□□ 1.62
SNIP1-203ENST00000493916 NAALADL2Q58DX5 795 aa25.14■■□□□ 1.62
SNIP1-203ENST00000493916 KRT79Q5XKE5 535 aa25.14■■□□□ 1.62
SNIP1-203ENST00000493916 ARL6IP4Q66PJ3 421 aaKnown RBP25.14■■□□□ 1.62
SNIP1-203ENST00000493916 TWF2Q6IBS0 349 aaKnown RBP25.14■■□□□ 1.62
SNIP1-203ENST00000493916 P2RX5Q93086 422 aa25.14■■□□□ 1.62
SNIP1-203ENST00000493916 PRDM6Q9NQX0 595 aa25.14■■□□□ 1.62
SNIP1-203ENST00000493916 PRRC2BQ5JSZ5 2229 aaKnown RBP25.14■■□□□ 1.61
SNIP1-203ENST00000493916 XIRP2A4UGR9 3374 aa25.13■■□□□ 1.61
SNIP1-203ENST00000493916 SKIP12755 728 aa25.13■■□□□ 1.61
SNIP1-203ENST00000493916 ATF7P17544 494 aaPredicted RBP25.13■■□□□ 1.61
SNIP1-203ENST00000493916 PADI6Q6TGC4 694 aa25.13■■□□□ 1.61
SNIP1-203ENST00000493916 CASD1Q96PB1 797 aa25.13■■□□□ 1.61
SNIP1-203ENST00000493916 LMAN2LQ9H0V9 348 aa25.13■■□□□ 1.61
SNIP1-203ENST00000493916 THEGQ9P2T0 379 aa25.13■■□□□ 1.61
SNIP1-203ENST00000493916 KIAA1024Q9UPX6 916 aa25.13■■□□□ 1.61
SNIP1-203ENST00000493916 PP2D1A8MPX8 630 aa25.12■■□□□ 1.61
SNIP1-203ENST00000493916 BMP15O95972 392 aa25.12■■□□□ 1.61
SNIP1-203ENST00000493916 CYP11B2P19099 503 aa25.12■■□□□ 1.61
SNIP1-203ENST00000493916 SYT1P21579 422 aa25.12■■□□□ 1.61
SNIP1-203ENST00000493916 RAB27AP51159 221 aa25.12■■□□□ 1.61
SNIP1-203ENST00000493916 TIGD5Q53EQ6 642 aa25.12■■□□□ 1.61
SNIP1-203ENST00000493916 RSPH1Q8WYR4 309 aa25.12■■□□□ 1.61
SNIP1-203ENST00000493916 MMTAG2Q9BU76 263 aaKnown RBP25.12■■□□□ 1.61
SNIP1-203ENST00000493916 DDX19AQ9NUU7 478 aaKnown RBP25.12■■□□□ 1.61
SNIP1-203ENST00000493916 ZNF623O75123 536 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms