RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 ATP13A4Q4VNC1 1196 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 HS1BP3Q53T59 392 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 ZBTB41Q5SVQ8 909 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 BROXQ5VW32 411 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 DBX2Q6ZNG2 339 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 POLNQ7Z5Q5 900 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 CLEC14AQ86T13 490 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 UBR7Q8N806 425 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 SHCBP1Q8NEM2 672 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 RABGGTAQ92696 567 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 GCDHQ92947 438 aaPredicted RBP5.3□□□□□ -1.56
CD46-217ENST00000493796 FERMT2Q96AC1 680 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 BORCS6Q96GS4 357 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 OR14A2Q96R54 314 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 CDK5RAP1Q96SZ6 601 aaKnown RBP5.3□□□□□ -1.56
CD46-217ENST00000493796 NOL10Q9BSC4 688 aaKnown RBP5.3□□□□□ -1.56
CD46-217ENST00000493796 SLC6A15Q9H2J7 730 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 NELFAQ9H3P2 528 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 IFT22Q9H7X7 185 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 CAAP1Q9H8G2 361 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 AGO3Q9H9G7 860 aaKnown RBP5.3□□□□□ -1.56
CD46-217ENST00000493796 SYNPO2Q9UMS6 1093 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 TSC22D4Q9Y3Q8 395 aa5.3□□□□□ -1.56
CD46-217ENST00000493796 RBM8AQ9Y5S9 174 aaKnown RBP5.3□□□□□ -1.56
CD46-217ENST00000493796 RB1CC1Q8TDY2 1594 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 MYPNQ86TC9 1320 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 MYO15BQ96JP2 1530 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 A0A0A6YYK5 440 aaPredicted RBP5.29□□□□□ -1.56
CD46-217ENST00000493796 NEMP1O14524 444 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 ZEB2O60315 1214 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 CLSTN1O94985 981 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 PCDH8O95206 1070 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 COMTP21964 271 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 SOX5P35711 763 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 ADAM8P78325 824 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 RIN1Q13671 783 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 ACAP1Q15027 740 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 ZXDCQ2QGD7 858 aaPredicted RBP5.29□□□□□ -1.56
CD46-217ENST00000493796 Q6ZSN1 163 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 FRMD7Q6ZUT3 714 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 STRA8Q7Z7C7 330 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 GGNQ86UU5 652 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 CXorf67Q86X51 503 aaPredicted RBP5.29□□□□□ -1.56
CD46-217ENST00000493796 CHAC2Q8WUX2 184 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 HIST1H2AHQ96KK5 128 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 TTC1Q99614 292 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 HIST1H2AJQ99878 128 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 SOX7Q9BT81 388 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 KRTAP4-2Q9BYR5 136 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 OSBPL6Q9BZF3 934 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 MYRFQ9Y2G1 1151 aa5.29□□□□□ -1.56
CD46-217ENST00000493796 SHROOM4Q9ULL8 1493 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 ST20-MTHFSA0A0A6YYL1 179 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 MUSKO15146 869 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 PFKMP08237 780 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 INSRRP14616 1297 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 HNRNPLP14866 589 aaKnown RBP eCLIP5.28□□□□□ -1.56
CD46-217ENST00000493796 ID4P47928 161 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 BPIFB4P59827 614 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 FOXL1Q12952 345 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 STRN3Q13033 797 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 TCIRG1Q13488 830 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 SAFB2Q14151 953 aaKnown RBP eCLIP5.28□□□□□ -1.56
CD46-217ENST00000493796 EGFLAMQ63HQ2 1017 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 RASSF3Q86WH2 238 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 PLA2G15Q8NCC3 412 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 PPP1R14CQ8TAE6 165 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 GPHA2Q96T91 129 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 PLA2G3Q9NZ20 509 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 PCDHB6Q9Y5E3 794 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 PPP2R3BQ9Y5P8 575 aa5.28□□□□□ -1.56
CD46-217ENST00000493796 PRSS38A1L453 326 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 DAPK3O43293 454 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 KDM1AO60341 852 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 RAB11FIP3O75154 756 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 MSX2P35548 267 aaPredicted RBP5.27□□□□□ -1.57
CD46-217ENST00000493796 MANFP55145 182 aaKnown RBP5.27□□□□□ -1.57
CD46-217ENST00000493796 GRM7Q14831 915 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 MAN2A1Q16706 1144 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 GAGE13Q4V321 117 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 PALM2Q8IXS6 379 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 AFAP1L2Q8N4X5 818 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 CDYL2Q8N8U2 506 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 ANKRD53Q8N9V6 530 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 EDAQ92838 391 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 RPL10LQ96L21 214 aaKnown RBP5.27□□□□□ -1.57
CD46-217ENST00000493796 ADOQ96SZ5 270 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 TMPRSS11EQ9UL52 423 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 APOBEC2Q9Y235 224 aaKnown RBP5.27□□□□□ -1.57
CD46-217ENST00000493796 NOC2LQ9Y3T9 749 aaKnown RBP5.27□□□□□ -1.57
CD46-217ENST00000493796 TESMINQ9Y4I5 508 aa5.27□□□□□ -1.57
CD46-217ENST00000493796 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.26□□□□□ -1.57
CD46-217ENST00000493796 ULK1O75385 1050 aa5.26□□□□□ -1.57
CD46-217ENST00000493796 FSBPO95073 299 aa5.26□□□□□ -1.57
CD46-217ENST00000493796 VIL1P09327 827 aaKnown RBP5.26□□□□□ -1.57
CD46-217ENST00000493796 VSIG10L2P0DP72 767 aa5.26□□□□□ -1.57
CD46-217ENST00000493796 ACO1P21399 889 aaKnown RBP5.26□□□□□ -1.57
CD46-217ENST00000493796 PRKD1Q15139 912 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms