RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ANKEF1Q9NU02 776 aa11.6□□□□□ -0.55
TRAPPC12-222ENST00000493792 PADI3Q9ULW8 664 aa11.6□□□□□ -0.55
TRAPPC12-222ENST00000493792 NOC2LQ9Y3T9 749 aaKnown RBP11.6□□□□□ -0.55
TRAPPC12-222ENST00000493792 KDM3AQ9Y4C1 1321 aa11.6□□□□□ -0.55
TRAPPC12-222ENST00000493792 USP34Q70CQ2 3546 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 LOXHD1Q8IVV2 1947 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 DENND3A2RUS2 1198 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 ARHGEF35A5YM69 484 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 PP2D1A8MPX8 630 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 GPR182O15218 404 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 USO1O60763 962 aaKnown RBP11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 GPR32O75388 356 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 MAFO75444 373 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 LYPLA2O95372 231 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 BMP15O95972 392 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 SPATA31C1P0DKV0 1188 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 RPA1P27694 616 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 CDC25AP30304 524 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 PRPHP41219 470 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 GPC3P51654 580 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 ATP2C1P98194 919 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 CEBPZQ03701 1054 aaKnown RBP11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 RESTQ13127 1097 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 SF3A1Q15459 793 aaKnown RBP11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 CSPP1Q1MSJ5 1256 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 FAM173BQ6P4H8 233 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 MAEAQ7L5Y9 396 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 LINC01465Q8N7H1 131 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 TMEM40Q8WWA1 233 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 TCP11Q8WWU5 503 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 PSPC1Q8WXF1 523 aaKnown RBP11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 NACC1Q96RE7 527 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 MTRQ99707 1265 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 POLR3CQ9BUI4 534 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 GCOM2Q9BZD3 368 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 ATP6V0A4Q9HBG4 840 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 KIAA1024Q9UPX6 916 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 MTMR6Q9Y217 621 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 PPME1Q9Y570 386 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 INSL6Q9Y581 213 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 STK24Q9Y6E0 443 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 SQORQ9Y6N5 450 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 TRIOO75962 3097 aa11.59□□□□□ -0.55
TRAPPC12-222ENST00000493792 A0A087WZ62 844 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 CSDE1O75534 798 aaKnown RBP11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 SRGAP2CP0DJJ0 459 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 FGFR4P22455 802 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 LTBRP36941 435 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 RARRES1P49788 294 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 HTRA4P83105 476 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 PDIA5Q14554 519 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 IL17AQ16552 155 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 KSR1Q8IVT5 923 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 RASSF8Q8NHQ8 419 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 SP7Q8TDD2 431 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 MRPL38Q96DV4 380 aaKnown RBP11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 CDK5RAP3Q96JB5 506 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 CEP89Q96ST8 783 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 YME1L1Q96TA2 773 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 FDXACB1Q9BRP7 624 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 FTHL17Q9BXU8 183 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 ADAMTS10Q9H324 1103 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 ZSCAN16Q9H4T2 348 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 DHX33Q9H6R0 707 aaKnown RBP11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 ERVK-5Q9HDB9 667 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 LRFN2Q9ULH4 789 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 ST3GAL5Q9UNP4 418 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 COL4A3BPQ9Y5P4 624 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 MICAL3Q7RTP6 2002 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 ARID2Q68CP9 1835 aa11.58□□□□□ -0.56
TRAPPC12-222ENST00000493792 ZNF318Q5VUA4 2279 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 IGKV6-21A0A0C4DH24 114 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 ENPP3O14638 875 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 GAS2O43903 313 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 DGAT1O75907 488 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 SSBP05455 408 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 XRCC6P12956 609 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 DARSP14868 501 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 EIF4BP23588 611 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 IRS1P35568 1242 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 CDC42EP1Q00587 391 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 BECN1Q14457 450 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 FOXD4L6Q3SYB3 417 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 ARL6IP4Q66PJ3 421 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 FOXD4L3Q6VB84 417 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 FAM228AQ86W67 206 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 ADHFE1Q8IWW8 467 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 ZNF710Q8N1W2 664 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 IGSF22Q8N9C0 903 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 PRPF31Q8WWY3 499 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 TOP1MTQ969P6 601 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 PABPC5Q96DU9 382 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 PLIN2Q99541 437 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 ADAM2Q99965 735 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 POLR3FQ9H1D9 316 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 DDX19AQ9NUU7 478 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 PRKAG3Q9UGI9 489 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 CLIC4Q9Y696 253 aa11.57□□□□□ -0.56
TRAPPC12-222ENST00000493792 PTPRSQ13332 1948 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms