RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 SRPRBQ9Y5M8 271 aaKnown RBP12.9□□□□□ -0.34
CTSA-209ENST00000493522 CDY2AQ9Y6F7 541 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 COL4A4P53420 1690 aaPredicted RBP12.89□□□□□ -0.35
CTSA-209ENST00000493522 PPP6R2O75170 966 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 MAFO75444 373 aaPredicted RBP12.89□□□□□ -0.35
CTSA-209ENST00000493522 VTNP04004 478 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 RARRES1P49788 294 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 DNM2P50570 870 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 ERVK-21P61565 698 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 MBTPS1Q14703 1052 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 SPECC1Q5M775 1068 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 IER5Q5VY09 327 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 TRAF7Q6Q0C0 670 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 RPAINQ86UA6 219 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 KIAA0319LQ8IZA0 1049 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 LINC01465Q8N7H1 131 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 KCNG4Q8TDN1 519 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 PNMA5Q96PV4 448 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 CEP89Q96ST8 783 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 MTRQ99707 1265 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 LRFN3Q9BTN0 628 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 NT5C3AQ9H0P0 336 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 ATP6V0A4Q9HBG4 840 aa12.89□□□□□ -0.35
CTSA-209ENST00000493522 DBR1Q9UK59 544 aaKnown RBP12.89□□□□□ -0.35
CTSA-209ENST00000493522 CIZ1Q9ULV3 898 aaPredicted RBP12.89□□□□□ -0.35
CTSA-209ENST00000493522 RBM19Q9Y4C8 960 aaKnown RBP12.89□□□□□ -0.35
CTSA-209ENST00000493522 MORC2Q9Y6X9 1032 aaPredicted RBP12.89□□□□□ -0.35
CTSA-209ENST00000493522 LINC01553A4QN01 128 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 E9PMD0 336 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 SLC26A4O43511 780 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 DGAT1O75907 488 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 CHRNA1P02708 482 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 SSBP05455 408 aaKnown RBP eCLIP12.88□□□□□ -0.35
CTSA-209ENST00000493522 GHRP10912 638 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 XRCC6P12956 609 aaKnown RBP eCLIP12.88□□□□□ -0.35
CTSA-209ENST00000493522 ME1P48163 572 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 MGAT3Q09327 533 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 DRP2Q13474 957 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 KARSQ15046 597 aaKnown RBP12.88□□□□□ -0.35
CTSA-209ENST00000493522 FAM26DQ5JW98 314 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 EXOC8Q8IYI6 725 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 NME8Q8N427 588 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 ZNF668Q96K58 619 aaPredicted RBP12.88□□□□□ -0.35
CTSA-209ENST00000493522 SPATA32Q96LK8 384 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 BHMT2Q9H2M3 363 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 DHX33Q9H6R0 707 aaKnown RBP12.88□□□□□ -0.35
CTSA-209ENST00000493522 DNM3Q9UQ16 869 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 INSL6Q9Y581 213 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 BRWD1Q9NSI6 2320 aa12.88□□□□□ -0.35
CTSA-209ENST00000493522 IGKV6-21A0A0C4DH24 114 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 RBAK-RBAKDNI3L0D1 243 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 GAS2O43903 313 aaKnown RBP12.87□□□□□ -0.35
CTSA-209ENST00000493522 CUTAO60888 179 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 EYA4O95677 639 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 PLCG1P19174 1290 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 NLRP11P59045 1033 aaKnown RBP12.87□□□□□ -0.35
CTSA-209ENST00000493522 MKRN4PQ13434 485 aaPredicted RBP12.87□□□□□ -0.35
CTSA-209ENST00000493522 KIZQ2M2Z5 673 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 TMEM119Q4V9L6 283 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 HYIQ5T013 277 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 FAM117BQ6P1L5 589 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 PADI6Q6TGC4 694 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 USP49Q70CQ1 688 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 KCNK18Q7Z418 384 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 RHPN2Q8IUC4 686 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 TCP11Q8WWU5 503 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 TMEM143Q96AN5 459 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 EPSTI1Q96J88 318 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 OSMRQ99650 979 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 CELF4Q9BZC1 486 aaKnown RBP12.87□□□□□ -0.35
CTSA-209ENST00000493522 CCSER1Q9C0I3 900 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 POLR3FQ9H1D9 316 aaPredicted RBP12.87□□□□□ -0.35
CTSA-209ENST00000493522 UBE2ZQ9H832 354 aaPredicted RBP12.87□□□□□ -0.35
CTSA-209ENST00000493522 XPNPEP1Q9NQW7 623 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 SUCLA2Q9P2R7 463 aaPredicted RBP12.87□□□□□ -0.35
CTSA-209ENST00000493522 CCDC39Q9UFE4 941 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 NLRC5Q86WI3 1866 aa12.87□□□□□ -0.35
CTSA-209ENST00000493522 GPR37L1O60883 481 aa12.86□□□□□ -0.35
CTSA-209ENST00000493522 AMHP03971 560 aa12.86□□□□□ -0.35
CTSA-209ENST00000493522 GPC3P51654 580 aa12.86□□□□□ -0.35
CTSA-209ENST00000493522 LPIN1Q14693 890 aa12.86□□□□□ -0.35
CTSA-209ENST00000493522 TCTN1Q2MV58 587 aa12.86□□□□□ -0.35
CTSA-209ENST00000493522 FBXO47Q5MNV8 452 aa12.86□□□□□ -0.35
CTSA-209ENST00000493522 MAEAQ7L5Y9 396 aa12.86□□□□□ -0.35
CTSA-209ENST00000493522 MYOCDQ8IZQ8 938 aa12.86□□□□□ -0.35
CTSA-209ENST00000493522 MCPH1Q8NEM0 835 aa12.86□□□□□ -0.35
CTSA-209ENST00000493522 FBXO22Q8NEZ5 403 aa12.86□□□□□ -0.35
CTSA-209ENST00000493522 LEO1Q8WVC0 666 aaPredicted RBP12.86□□□□□ -0.35
CTSA-209ENST00000493522 NLRP7Q8WX94 980 aa12.86□□□□□ -0.35
CTSA-209ENST00000493522 PSPC1Q8WXF1 523 aaKnown RBP12.86□□□□□ -0.35
CTSA-209ENST00000493522 SEPT8Q92599 483 aa12.86□□□□□ -0.35
CTSA-209ENST00000493522 NLRP4Q96MN2 994 aa12.86□□□□□ -0.35
CTSA-209ENST00000493522 OSBPL7Q9BZF2 842 aa12.86□□□□□ -0.35
CTSA-209ENST00000493522 COL4A3BPQ9Y5P4 624 aa12.86□□□□□ -0.35
CTSA-209ENST00000493522 KIAA1671Q9BY89 1806 aa12.85□□□□□ -0.35
CTSA-209ENST00000493522 KCNA5P22460 613 aa12.85□□□□□ -0.35
CTSA-209ENST00000493522 PAK2Q13177 524 aa12.85□□□□□ -0.35
CTSA-209ENST00000493522 DHX8Q14562 1220 aaKnown RBP12.85□□□□□ -0.35
CTSA-209ENST00000493522 PTPROQ16827 1216 aa12.85□□□□□ -0.35
CTSA-209ENST00000493522 LEXMQ3ZCV2 418 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms