RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 ATF7P17544 494 aaPredicted RBP24.85■■□□□ 1.57
LYSMD4-208ENST00000493256 QARSP47897 775 aaKnown RBP24.85■■□□□ 1.57
LYSMD4-208ENST00000493256 LRRC43Q8N309 656 aa24.85■■□□□ 1.57
LYSMD4-208ENST00000493256 WASF1Q92558 559 aa24.85■■□□□ 1.57
LYSMD4-208ENST00000493256 TLE6Q9H808 572 aa24.85■■□□□ 1.57
LYSMD4-208ENST00000493256 DACT1Q9NYF0 836 aa24.85■■□□□ 1.57
LYSMD4-208ENST00000493256 WRAP73Q9P2S5 460 aaPredicted RBP24.85■■□□□ 1.57
LYSMD4-208ENST00000493256 FSCN2O14926 492 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 PER2O15055 1255 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 TBX3O15119 743 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 EYA4O95677 639 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 PBX3P40426 434 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 NPEPPSP55786 919 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 PLCB3Q01970 1234 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 NR5A1Q13285 461 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 ME3Q16798 604 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 KCNT2Q6UVM3 1135 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 ZNF410Q86VK4 478 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 POTEDQ86YR6 584 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 RHPN2Q8IUC4 686 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 KSR1Q8IVT5 923 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 NAP1L4Q99733 375 aaKnown RBP24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 CYP26B1Q9NR63 512 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 BARX2Q9UMQ3 279 aaPredicted RBP24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 LZTS1Q9Y250 596 aa24.84■■□□□ 1.57
LYSMD4-208ENST00000493256 EOMESO95936 686 aa24.83■■□□□ 1.57
LYSMD4-208ENST00000493256 P4HBP07237 508 aaKnown RBP24.83■■□□□ 1.57
LYSMD4-208ENST00000493256 SFPQP23246 707 aaKnown RBP eCLIP24.83■■□□□ 1.57
LYSMD4-208ENST00000493256 ZNF579Q8NAF0 562 aaKnown RBP24.83■■□□□ 1.57
LYSMD4-208ENST00000493256 SMRP1Q8NCR6 262 aa24.83■■□□□ 1.57
LYSMD4-208ENST00000493256 HELQQ8TDG4 1101 aa24.83■■□□□ 1.57
LYSMD4-208ENST00000493256 MRPS27Q92552 414 aaKnown RBP24.83■■□□□ 1.57
LYSMD4-208ENST00000493256 TNFRSF25Q93038 417 aa24.83■■□□□ 1.57
LYSMD4-208ENST00000493256 GTF3C6Q969F1 213 aa24.83■■□□□ 1.57
LYSMD4-208ENST00000493256 NLRP4Q96MN2 994 aa24.83■■□□□ 1.57
LYSMD4-208ENST00000493256 ZNF558Q96NG5 402 aa24.83■■□□□ 1.57
LYSMD4-208ENST00000493256 JPH2Q9BR39 696 aaPredicted RBP24.83■■□□□ 1.57
LYSMD4-208ENST00000493256 CHST12Q9NRB3 414 aa24.83■■□□□ 1.57
LYSMD4-208ENST00000493256 DKC1O60832 514 aaKnown RBP eCLIP24.82■■□□□ 1.56
LYSMD4-208ENST00000493256 ALADP13716 330 aa24.82■■□□□ 1.56
LYSMD4-208ENST00000493256 KRT2P35908 639 aa24.82■■□□□ 1.56
LYSMD4-208ENST00000493256 COASYQ13057 564 aa24.82■■□□□ 1.56
LYSMD4-208ENST00000493256 DUSP6Q16828 381 aa24.82■■□□□ 1.56
LYSMD4-208ENST00000493256 ERICH6BQ5W0A0 696 aa24.82■■□□□ 1.56
LYSMD4-208ENST00000493256 PDE12Q6L8Q7 609 aaKnown RBP24.82■■□□□ 1.56
LYSMD4-208ENST00000493256 VN1R2Q8NFZ6 395 aa24.82■■□□□ 1.56
LYSMD4-208ENST00000493256 POP1Q99575 1024 aaKnown RBP24.82■■□□□ 1.56
LYSMD4-208ENST00000493256 DCXO43602 365 aa24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 MARCH6O60337 910 aa24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 PPM1AP35813 382 aa24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 PHKA2P46019 1235 aa24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 RBM10P98175 930 aaKnown RBP24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 SPIRE1Q08AE8 756 aa24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 EPHA7Q15375 998 aa24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 PLPP4Q5VZY2 271 aa24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 NCAPH2Q6IBW4 605 aa24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 NSUN7Q8NE18 718 aaKnown RBP24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 SLC7A3Q8WY07 619 aa24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 CEP170P1Q96L14 293 aa24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 CDCA3Q99618 268 aaPredicted RBP24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 LXNQ9BS40 222 aa24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 TRAIPQ9BWF2 469 aa24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 INO80BQ9C086 356 aaPredicted RBP24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 RGL1Q9NZL6 768 aa24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 PUF60Q9UHX1 559 aaKnown RBP24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 PIN4Q9Y237 131 aaKnown RBP24.81■■□□□ 1.56
LYSMD4-208ENST00000493256 TWF2Q6IBS0 349 aaKnown RBP24.8■■□□□ 1.56
LYSMD4-208ENST00000493256 C4orf19Q8IY42 314 aa24.8■■□□□ 1.56
LYSMD4-208ENST00000493256 TCF25Q9BQ70 676 aa24.8■■□□□ 1.56
LYSMD4-208ENST00000493256 DHX33Q9H6R0 707 aaKnown RBP24.8■■□□□ 1.56
LYSMD4-208ENST00000493256 BRMS1Q9HCU9 246 aa24.8■■□□□ 1.56
LYSMD4-208ENST00000493256 SPG21Q9NZD8 308 aa24.8■■□□□ 1.56
LYSMD4-208ENST00000493256 COL4A3BPQ9Y5P4 624 aa24.8■■□□□ 1.56
LYSMD4-208ENST00000493256 POLGP54098 1239 aaPredicted RBP24.79■■□□□ 1.56
LYSMD4-208ENST00000493256 CATSPER4Q7RTX7 472 aa24.79■■□□□ 1.56
LYSMD4-208ENST00000493256 SLFN12Q8IYM2 578 aa24.79■■□□□ 1.56
LYSMD4-208ENST00000493256 SLC39A11Q8N1S5 342 aa24.79■■□□□ 1.56
LYSMD4-208ENST00000493256 TMEM143Q96AN5 459 aa24.79■■□□□ 1.56
LYSMD4-208ENST00000493256 DYDC2Q96IM9 177 aa24.79■■□□□ 1.56
LYSMD4-208ENST00000493256 MRPL9Q9BYD2 267 aaKnown RBP24.79■■□□□ 1.56
LYSMD4-208ENST00000493256 IFT122Q9HBG6 1241 aa24.79■■□□□ 1.56
LYSMD4-208ENST00000493256 ENTPD7Q9NQZ7 604 aa24.79■■□□□ 1.56
LYSMD4-208ENST00000493256 USP15Q9Y4E8 981 aaPredicted RBP24.79■■□□□ 1.56
LYSMD4-208ENST00000493256 PPME1Q9Y570 386 aa24.79■■□□□ 1.56
LYSMD4-208ENST00000493256 FSD2A1L4K1 749 aa24.78■■□□□ 1.56
LYSMD4-208ENST00000493256 JAK2O60674 1132 aa24.78■■□□□ 1.56
LYSMD4-208ENST00000493256 BAG4O95429 457 aaKnown RBP24.78■■□□□ 1.56
LYSMD4-208ENST00000493256 YWHABP31946 246 aaKnown RBP24.78■■□□□ 1.56
LYSMD4-208ENST00000493256 RFC5P40937 340 aa24.78■■□□□ 1.56
LYSMD4-208ENST00000493256 NEK4P51957 841 aa24.78■■□□□ 1.56
LYSMD4-208ENST00000493256 KRT17Q04695 432 aa24.78■■□□□ 1.56
LYSMD4-208ENST00000493256 PRPF31Q8WWY3 499 aaKnown RBP24.78■■□□□ 1.56
LYSMD4-208ENST00000493256 LPPQ93052 612 aa24.78■■□□□ 1.56
LYSMD4-208ENST00000493256 NGRNQ9NPE2 291 aaKnown RBP24.78■■□□□ 1.56
LYSMD4-208ENST00000493256 BMP2KQ9NSY1 1161 aaPredicted RBP24.78■■□□□ 1.56
LYSMD4-208ENST00000493256 HCN4Q9Y3Q4 1203 aa24.78■■□□□ 1.56
LYSMD4-208ENST00000493256 TRIOO75962 3097 aa24.77■■□□□ 1.56
LYSMD4-208ENST00000493256 ARID2Q68CP9 1835 aa24.77■■□□□ 1.56
LYSMD4-208ENST00000493256 HIDE1A8MVS5 230 aa24.77■■□□□ 1.56
LYSMD4-208ENST00000493256 PRR33A8MZF0 331 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms