RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 FGFR4P22455 802 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 SFPQP23246 707 aaKnown RBP eCLIP14.19□□□□□ -0.14
CLIP2-209ENST00000493166 ARL2P36404 184 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 TXLNAP40222 546 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 PHKA2P46019 1235 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 KARSQ15046 597 aaKnown RBP14.19□□□□□ -0.14
CLIP2-209ENST00000493166 TMEM119Q4V9L6 283 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 SPECC1Q5M775 1068 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 ZNF697Q5TEC3 545 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 ATL3Q6DD88 541 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 FAM43BQ6ZT52 329 aaPredicted RBP14.19□□□□□ -0.14
CLIP2-209ENST00000493166 KCTD17Q8N5Z5 321 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 RNF149Q8NC42 400 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 LINC00301Q8NCQ3 95 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 ASAP3Q8TDY4 903 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 LINC01599Q8WXQ3 324 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 TIFAQ96CG3 184 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 CLIC6Q96NY7 704 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 CCSER1Q9C0I3 900 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 TSPYL2Q9H2G4 693 aaPredicted RBP14.19□□□□□ -0.14
CLIP2-209ENST00000493166 GPRC5CQ9NQ84 441 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 CFAP45Q9UL16 551 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 MYO9BQ13459 2157 aa14.18□□□□□ -0.14
CLIP2-209ENST00000493166 MGEA5O60502 916 aa14.18□□□□□ -0.14
CLIP2-209ENST00000493166 PPP6R2O75170 966 aa14.18□□□□□ -0.14
CLIP2-209ENST00000493166 GJB5O95377 273 aa14.18□□□□□ -0.14
CLIP2-209ENST00000493166 SSBP05455 408 aaKnown RBP eCLIP14.18□□□□□ -0.14
CLIP2-209ENST00000493166 MYOGP15173 224 aa14.18□□□□□ -0.14
CLIP2-209ENST00000493166 GLRA2P23416 452 aa14.18□□□□□ -0.14
CLIP2-209ENST00000493166 DNM1Q05193 864 aaKnown RBP14.18□□□□□ -0.14
CLIP2-209ENST00000493166 CAPSQ13938 189 aa14.18□□□□□ -0.14
CLIP2-209ENST00000493166 SRGAP1Q7Z6B7 1085 aa14.18□□□□□ -0.14
CLIP2-209ENST00000493166 SYMPKQ92797 1274 aaKnown RBP14.18□□□□□ -0.14
CLIP2-209ENST00000493166 TOP1MTQ969P6 601 aa14.18□□□□□ -0.14
CLIP2-209ENST00000493166 EPSTI1Q96J88 318 aa14.18□□□□□ -0.14
CLIP2-209ENST00000493166 ADAM2Q99965 735 aa14.18□□□□□ -0.14
CLIP2-209ENST00000493166 NKX2-4Q9H2Z4 354 aa14.18□□□□□ -0.14
CLIP2-209ENST00000493166 IFT122Q9HBG6 1241 aa14.18□□□□□ -0.14
CLIP2-209ENST00000493166 YBX2Q9Y2T7 364 aaKnown RBP14.18□□□□□ -0.14
CLIP2-209ENST00000493166 ZDHHC9Q9Y397 364 aa14.18□□□□□ -0.14
CLIP2-209ENST00000493166 COL4A4P53420 1690 aaPredicted RBP14.17□□□□□ -0.14
CLIP2-209ENST00000493166 TMEM265A0A087WTH1 108 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 LRRIQ4A6NIV6 560 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 PLA2G4BP0C869 781 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 ZSCAN20P17040 1043 aaPredicted RBP14.17□□□□□ -0.14
CLIP2-209ENST00000493166 PLCG1P19174 1290 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 IBSPP21815 317 aaPredicted RBP14.17□□□□□ -0.14
CLIP2-209ENST00000493166 ANP32AP39687 249 aaKnown RBP14.17□□□□□ -0.14
CLIP2-209ENST00000493166 USP49Q70CQ1 688 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 CATSPER4Q7RTX7 472 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 RTN4RL1Q86UN2 441 aaPredicted RBP14.17□□□□□ -0.14
CLIP2-209ENST00000493166 DEFB123Q8N688 67 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 SYT2Q8N9I0 419 aaPredicted RBP14.17□□□□□ -0.14
CLIP2-209ENST00000493166 KCNG4Q8TDN1 519 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 KIFAP3Q92845 792 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 RAD9AQ99638 391 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 RUSC1Q9BVN2 902 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 SLC28A3Q9HAS3 691 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 RGS18Q9NS28 235 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 C1orf112Q9NSG2 853 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 CCDC39Q9UFE4 941 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 ATP6V1DQ9Y5K8 247 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 COL4A6Q14031 1691 aa14.17□□□□□ -0.14
CLIP2-209ENST00000493166 CA3P07451 260 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 NCLP19338 710 aaKnown RBP14.16□□□□□ -0.14
CLIP2-209ENST00000493166 SARSP49591 514 aaKnown RBP14.16□□□□□ -0.14
CLIP2-209ENST00000493166 SLC12A3P55017 1021 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 PTENP60484 403 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 POU5F1BQ06416 359 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 DSC3Q14574 896 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 PPP2R5AQ15172 486 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 PPP2R2DQ66LE6 453 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 RINT1Q6NUQ1 792 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 Q7L0L9 218 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 NPAS4Q8IUM7 802 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 IFT74Q96LB3 600 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 FAM161BQ96MY7 647 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 YME1L1Q96TA2 773 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 TIPINQ9BVW5 301 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 MINDY3Q9H8M7 445 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 RNF216Q9NWF9 866 aaPredicted RBP14.16□□□□□ -0.14
CLIP2-209ENST00000493166 LRFN2Q9ULH4 789 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 PIN4Q9Y237 131 aaKnown RBP14.16□□□□□ -0.14
CLIP2-209ENST00000493166 INSL6Q9Y581 213 aa14.16□□□□□ -0.14
CLIP2-209ENST00000493166 INO80B-WBP1J3KQ70 363 aa14.15□□□□□ -0.14
CLIP2-209ENST00000493166 CUTAO60888 179 aa14.15□□□□□ -0.14
CLIP2-209ENST00000493166 HIP1RO75146 1068 aa14.15□□□□□ -0.14
CLIP2-209ENST00000493166 ERLIN2O94905 339 aa14.15□□□□□ -0.14
CLIP2-209ENST00000493166 STAG3L1P0CL83 205 aa14.15□□□□□ -0.14
CLIP2-209ENST00000493166 ME1P48163 572 aa14.15□□□□□ -0.14
CLIP2-209ENST00000493166 KRT85P78386 507 aa14.15□□□□□ -0.14
CLIP2-209ENST00000493166 NUCB2P80303 420 aa14.15□□□□□ -0.14
CLIP2-209ENST00000493166 DHX8Q14562 1220 aaKnown RBP14.15□□□□□ -0.14
CLIP2-209ENST00000493166 RRAGBQ5VZM2 374 aa14.15□□□□□ -0.14
CLIP2-209ENST00000493166 C1orf186Q6ZWK4 172 aa14.15□□□□□ -0.14
CLIP2-209ENST00000493166 SLC24A5Q71RS6 500 aa14.15□□□□□ -0.14
CLIP2-209ENST00000493166 IFNLR1Q8IU57 520 aaPredicted RBP14.15□□□□□ -0.14
CLIP2-209ENST00000493166 ZBTB8OSQ8IWT0 167 aa14.15□□□□□ -0.14
CLIP2-209ENST00000493166 DEPTORQ8TB45 409 aa14.15□□□□□ -0.14
CLIP2-209ENST00000493166 BSNDQ8WZ55 320 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms