RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 SUCLA2Q9P2R7 463 aaPredicted RBP10.36□□□□□ -0.75
CSTF1-206ENST00000493039 LAMA2P24043 3122 aaKnown RBP10.36□□□□□ -0.75
CSTF1-206ENST00000493039 ARID2Q68CP9 1835 aa10.36□□□□□ -0.75
CSTF1-206ENST00000493039 SMIM35A0A1B0GVV1 85 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 CD4P01730 458 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 VTNP04004 478 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 KRT18P05783 430 aaKnown RBP10.35□□□□□ -0.75
CSTF1-206ENST00000493039 CYP2C9P11712 490 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 NPTX2P47972 431 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 RTP1P59025 263 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 PTPN11Q06124 597 aaPredicted RBP10.35□□□□□ -0.75
CSTF1-206ENST00000493039 LAMTOR4Q0VGL1 99 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 KCNB1Q14721 858 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 PTGISQ16647 500 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 TRIM71Q2Q1W2 868 aaKnown RBP10.35□□□□□ -0.75
CSTF1-206ENST00000493039 ZSCAN23Q3MJ62 389 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 HERC4Q5GLZ8 1057 aaPredicted RBP10.35□□□□□ -0.75
CSTF1-206ENST00000493039 IER5Q5VY09 327 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 KIAA0895Q8NCT3 520 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 DNAJB3Q8WWF6 145 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 SMARCE1Q969G3 411 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 ABHD8Q96I13 439 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 KIFC3Q9BVG8 833 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 TIPINQ9BVW5 301 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 STRA6Q9BX79 667 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 FAM49AQ9H0Q0 323 aaPredicted RBP10.35□□□□□ -0.75
CSTF1-206ENST00000493039 PARVGQ9HBI0 331 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 TBC1D7Q9P0N9 293 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 GPR32O75388 356 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 GNAT1P11488 350 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 PLS3P13797 630 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 NMT1P30419 496 aaKnown RBP10.35□□□□□ -0.75
CSTF1-206ENST00000493039 HOXD13P35453 343 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 PEX3P56589 373 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 CAPSQ13938 189 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 MORC3Q14149 939 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 C1orf53Q5VUE5 145 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 ANKRD33Q7Z3H0 272 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 SMYD4Q8IYR2 804 aaPredicted RBP10.35□□□□□ -0.75
CSTF1-206ENST00000493039 KIFAP3Q92845 792 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 TSPAN18Q96SJ8 248 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 FUCA2Q9BTY2 467 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 OSBPL7Q9BZF2 842 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 GZF1Q9H116 711 aaPredicted RBP10.35□□□□□ -0.75
CSTF1-206ENST00000493039 ADAMTS10Q9H324 1103 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 IFT122Q9HBG6 1241 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 GDAQ9Y2T3 454 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 COL4A3BPQ9Y5P4 624 aa10.35□□□□□ -0.75
CSTF1-206ENST00000493039 SYCE3A1L190 88 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 GAS2O43903 313 aaKnown RBP10.34□□□□□ -0.75
CSTF1-206ENST00000493039 FAM13AO94988 1023 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 IQCF3P0C7M6 154 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 CD44P16070 742 aaKnown RBP10.34□□□□□ -0.75
CSTF1-206ENST00000493039 KCNA1Q09470 495 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 TMEM62Q0P6H9 643 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 LRRC26Q2I0M4 334 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 ODR4Q5SWX8 454 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 TRAF7Q6Q0C0 670 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 TAS1R3Q7RTX0 852 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 ZNF720Q7Z2F6 126 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 RHPN2Q8IUC4 686 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 SDR16C5Q8N3Y7 309 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 MYCT1Q8N699 235 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 RETREG2Q8NC44 543 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 TMEM161BQ8NDZ6 487 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 PSPC1Q8WXF1 523 aaKnown RBP10.34□□□□□ -0.75
CSTF1-206ENST00000493039 DRC1Q96MC2 740 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 JPH2Q9BR39 696 aaPredicted RBP10.34□□□□□ -0.75
CSTF1-206ENST00000493039 ZHX3Q9H4I2 956 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 C11orf49Q9H6J7 331 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 MINDY3Q9H8M7 445 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 SLC39A2Q9NP94 309 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 OLFML3Q9NRN5 406 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 HOOK1Q9UJC3 728 aaKnown RBP10.34□□□□□ -0.75
CSTF1-206ENST00000493039 EVPLQ92817 2033 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 TBCAO75347 108 aaKnown RBP10.34□□□□□ -0.75
CSTF1-206ENST00000493039 CSDE1O75534 798 aaKnown RBP10.34□□□□□ -0.75
CSTF1-206ENST00000493039 PPP1R37O75864 691 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 SMC2O95347 1197 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 GPC3P51654 580 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 TLE2Q04725 743 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 FAAP100Q0VG06 881 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 TRIM60Q495X7 471 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 ZC2HC1CQ53FD0 456 aaPredicted RBP10.34□□□□□ -0.75
CSTF1-206ENST00000493039 TAF2Q6P1X5 1199 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 DNAJC14Q6Y2X3 702 aaPredicted RBP10.34□□□□□ -0.75
CSTF1-206ENST00000493039 EPM2AIP1Q7L775 607 aaPredicted RBP10.34□□□□□ -0.75
CSTF1-206ENST00000493039 NECAB2Q7Z6G3 386 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 RPAINQ86UA6 219 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 CCDC65Q8IXS2 484 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 SPIRE2Q8WWL2 714 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 CCDC34Q96HJ3 373 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 PPP1R16BQ96T49 567 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 IKZF4Q9H2S9 585 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 C17orf75Q9HAS0 396 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 PCDH10Q9P2E7 1040 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 ARHGAP28Q9P2N2 729 aa10.34□□□□□ -0.75
CSTF1-206ENST00000493039 A0A087WZ62 844 aa10.33□□□□□ -0.76
CSTF1-206ENST00000493039 SLC16A4O15374 487 aa10.33□□□□□ -0.76
CSTF1-206ENST00000493039 CHRNA1P02708 482 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms