RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 OTOFQ9HC10 1997 aa23.01■■□□□ 1.27
CCDC88B-208ENST00000492980 SLC16A4O15374 487 aa23.01■■□□□ 1.27
CCDC88B-208ENST00000492980 SASH3O75995 380 aa23.01■■□□□ 1.27
CCDC88B-208ENST00000492980 ANXA13P27216 316 aa23.01■■□□□ 1.27
CCDC88B-208ENST00000492980 VGLL4Q14135 290 aa23.01■■□□□ 1.27
CCDC88B-208ENST00000492980 KIAA0753Q2KHM9 967 aa23.01■■□□□ 1.27
CCDC88B-208ENST00000492980 C10orf76Q5T2E6 689 aa23.01■■□□□ 1.27
CCDC88B-208ENST00000492980 OSBPL9Q96SU4 736 aa23.01■■□□□ 1.27
CCDC88B-208ENST00000492980 INTS2Q9H0H0 1204 aaKnown RBP23.01■■□□□ 1.27
CCDC88B-208ENST00000492980 ZNF862O60290 1169 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 STBD1O95210 358 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 NAP1L1P55209 391 aaKnown RBP23■■□□□ 1.27
CCDC88B-208ENST00000492980 VSNL1P62760 191 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 LONRF2Q1L5Z9 754 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 DLK2Q6UY11 383 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 COG1Q8WTW3 980 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 NENFQ9UMX5 172 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 TELO2Q9Y4R8 837 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 UTRNP46939 3433 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 NCK2O43639 380 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 STAM2O75886 525 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 KRT13P13646 458 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 FERP16591 822 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 TCP1P17987 556 aaKnown RBP23■■□□□ 1.27
CCDC88B-208ENST00000492980 STAT1P42224 750 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 PLA2G4AP47712 749 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 NFRKBQ6P4R8 1299 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 INTS8Q75QN2 995 aaKnown RBP23■■□□□ 1.27
CCDC88B-208ENST00000492980 SLC17A8Q8NDX2 589 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 CDHR1Q96JP9 859 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 TLR10Q9BXR5 811 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 JPH1Q9HDC5 661 aaPredicted RBP23■■□□□ 1.27
CCDC88B-208ENST00000492980 NAGPAQ9UK23 515 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 DNAJC12Q9UKB3 198 aa23■■□□□ 1.27
CCDC88B-208ENST00000492980 A0A0G2JMZ2 1700 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 BTNL10A8MVZ5 291 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 F8VZ95 297 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 TUBBP07437 444 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 SNRPFP62306 86 aaKnown RBP22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 ZNF572Q7Z3I7 529 aaPredicted RBP22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 ATP6V0A1Q93050 837 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 IWS1Q96ST2 819 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 FUT8Q9BYC5 575 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 STK33Q9BYT3 514 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 HSPBP1Q9NZL4 362 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 PCDHGC5Q9Y5F6 944 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 SPATA31C2B4DYI2 1134 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 GFPT2O94808 682 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 DDNO94850 711 aaPredicted RBP22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 PSAPP07602 524 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 SOX5P35711 763 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 DLG4P78352 724 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 TREML2Q5T2D2 321 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 OTUD6AQ7L8S5 288 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 XXYLT1Q8NBI6 393 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 SLC9A2Q9UBY0 812 aa22.99■■□□□ 1.27
CCDC88B-208ENST00000492980 PALMO75781 387 aa22.98■■□□□ 1.27
CCDC88B-208ENST00000492980 BEND6Q5SZJ8 279 aaPredicted RBP22.98■■□□□ 1.27
CCDC88B-208ENST00000492980 WDR93Q6P2C0 686 aa22.98■■□□□ 1.27
CCDC88B-208ENST00000492980 GPR88Q9GZN0 384 aa22.98■■□□□ 1.27
CCDC88B-208ENST00000492980 APEX2Q9UBZ4 518 aa22.98■■□□□ 1.27
CCDC88B-208ENST00000492980 TSKSQ9UJT2 592 aa22.98■■□□□ 1.27
CCDC88B-208ENST00000492980 ATP8B3O60423 1300 aa22.98■■□□□ 1.27
CCDC88B-208ENST00000492980 DKC1O60832 514 aaKnown RBP eCLIP22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 ERLIN1O75477 346 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 NPTX2P47972 431 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 VAMP7P51809 220 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 DRAP1Q14919 205 aaPredicted RBP22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 GNPTABQ3T906 1256 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 SWSAP1Q6NVH7 229 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 TMEM161BQ8NDZ6 487 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 ZSWIM2Q8NEG5 633 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 CHST13Q8NET6 341 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 LMO3Q8TAP4 145 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 CEP170P1Q96L14 293 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 DAAM1Q9Y4D1 1078 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 MAPK13O15264 365 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 EVI5O60447 810 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 ACTR2P61160 394 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 ALKBH5Q6P6C2 394 aaKnown RBP22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 CCDC60Q8IWA6 550 aaPredicted RBP22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 OLIG1Q8TAK6 271 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 CNKSR2Q8WXI2 1034 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 BSNDQ8WZ55 320 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 HVCN1Q96D96 273 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 ABCB6Q9NP58 842 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 ADARB2Q9NS39 739 aaKnown RBP22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 RNF216Q9NWF9 866 aaPredicted RBP22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 TBX20Q9UMR3 447 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 EMSYQ7Z589 1322 aa22.97■■□□□ 1.27
CCDC88B-208ENST00000492980 CCDC169A6NNP5 214 aa22.96■■□□□ 1.27
CCDC88B-208ENST00000492980 C2orf54Q08AI8 447 aa22.96■■□□□ 1.27
CCDC88B-208ENST00000492980 DMP1Q13316 513 aaPredicted RBP22.96■■□□□ 1.27
CCDC88B-208ENST00000492980 C1orf220Q5T0J3 134 aa22.96■■□□□ 1.27
CCDC88B-208ENST00000492980 ABHD15Q6UXT9 468 aa22.96■■□□□ 1.27
CCDC88B-208ENST00000492980 VPS36Q86VN1 386 aa22.96■■□□□ 1.27
CCDC88B-208ENST00000492980 PSMB7Q99436 277 aa22.96■■□□□ 1.27
CCDC88B-208ENST00000492980 KIFC3Q9BVG8 833 aa22.96■■□□□ 1.27
CCDC88B-208ENST00000492980 ADM5C9JUS6 153 aa22.96■■□□□ 1.27
CCDC88B-208ENST00000492980 DDX3XO00571 662 aaKnown RBP eCLIP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms