RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 MAPK13O15264 365 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 XBP1P17861 261 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 ATP5DP30049 168 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 HOXD12P35452 270 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 RCN1Q15293 331 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 HLFQ16534 295 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 IL17AQ16552 155 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 ZNF568Q3ZCX4 644 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 SYDE2Q5VT97 1194 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 ZDHHC24Q6UX98 284 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 ST13P4Q8IZP2 240 aaPredicted RBP10.44□□□□□ -0.74
VPS8-225ENST00000492449 ATP11CQ8NB49 1132 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 POLR3CQ9BUI4 534 aaPredicted RBP10.44□□□□□ -0.74
VPS8-225ENST00000492449 LGR6Q9HBX8 967 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 SAR1AQ9NR31 198 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 KRT82Q9NSB4 513 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 SUCLA2Q9P2R7 463 aaPredicted RBP10.44□□□□□ -0.74
VPS8-225ENST00000492449 RREB1Q92766 1687 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 TLDC2A0PJX2 215 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 TMEM120BA0PK00 339 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 TMEM247A6NEH6 219 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 PSMG1O95456 288 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 ASMTLO95671 621 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 TARSP26639 723 aaKnown RBP10.44□□□□□ -0.74
VPS8-225ENST00000492449 HOXC9P31274 260 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 DNA2P51530 1060 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 ADARP55265 1226 aaKnown RBP10.44□□□□□ -0.74
VPS8-225ENST00000492449 GRM2Q14416 872 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 DDB1Q16531 1140 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 SLC44A4Q53GD3 710 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 LRRC37BQ96QE4 947 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 TGS1Q96RS0 853 aaKnown RBP10.44□□□□□ -0.74
VPS8-225ENST00000492449 MAGEF1Q9HAY2 307 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 DISC1Q9NRI5 854 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 FAM207AQ9NSI2 230 aaPredicted RBP10.44□□□□□ -0.74
VPS8-225ENST00000492449 KBTBD4Q9NVX7 518 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 TUBA8Q9NY65 449 aaPredicted RBP10.44□□□□□ -0.74
VPS8-225ENST00000492449 CEP72Q9P209 647 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 ATP6V0A2Q9Y487 856 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 TROVE2P10155 538 aaKnown RBP eCLIP10.43□□□□□ -0.74
VPS8-225ENST00000492449 ITGA4P13612 1032 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 PORP16435 677 aaPredicted RBP10.43□□□□□ -0.74
VPS8-225ENST00000492449 IL15P40933 162 aaPredicted RBP10.43□□□□□ -0.74
VPS8-225ENST00000492449 ACADVLP49748 655 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 CASP7P55210 303 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 DHX34Q14147 1143 aaKnown RBP10.43□□□□□ -0.74
VPS8-225ENST00000492449 SPIDRQ14159 915 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 PPP2R5BQ15173 497 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 NAALADL2Q58DX5 795 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 SCUBE1Q8IWY4 988 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 RBM46Q8TBY0 533 aaKnown RBP10.43□□□□□ -0.74
VPS8-225ENST00000492449 EPS8L3Q8TE67 593 aaKnown RBP10.43□□□□□ -0.74
VPS8-225ENST00000492449 ERP27Q96DN0 273 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 SERPINB12Q96P63 405 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 SYNCQ9H7C4 482 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 DIS3Q9Y2L1 958 aaKnown RBP10.43□□□□□ -0.74
VPS8-225ENST00000492449 DLEC1Q9Y238 1755 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 RIPK2O43353 540 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 TLR2O60603 784 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 POLD1P28340 1107 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 EMP3P54852 163 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 MAP3K10Q02779 954 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 MOGSQ13724 837 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 ALX1Q15699 326 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 RIC3Q7Z5B4 369 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 KBTBD2Q8IY47 623 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 TEKT1Q969V4 418 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.43□□□□□ -0.74
VPS8-225ENST00000492449 LTN1O94822 1766 aa10.43□□□□□ -0.74
VPS8-225ENST00000492449 CAPN9O14815 690 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 TBX10O75333 385 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 SUPT3HO75486 399 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 UBTFL6P0CB48 400 aaPredicted RBP10.42□□□□□ -0.74
VPS8-225ENST00000492449 TXKP42681 527 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 SLC39A6Q13433 755 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 CYLC2Q14093 348 aaPredicted RBP10.42□□□□□ -0.74
VPS8-225ENST00000492449 HNRNPDQ14103 355 aaKnown RBP10.42□□□□□ -0.74
VPS8-225ENST00000492449 ZNF174Q15697 407 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 MFSD4BQ5TF39 518 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 HS2ST1Q7LGA3 356 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 MPP4Q96JB8 637 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 CELF4Q9BZC1 486 aaKnown RBP10.42□□□□□ -0.74
VPS8-225ENST00000492449 MMRN2Q9H8L6 949 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 FAIMQ9NVQ4 179 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 TJP1Q07157 1748 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 DDX3XO00571 662 aaKnown RBP eCLIP10.42□□□□□ -0.74
VPS8-225ENST00000492449 TAC1P20366 129 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 CRABP2P29373 138 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 CEBPAP49715 358 aaPredicted RBP10.42□□□□□ -0.74
VPS8-225ENST00000492449 TIMM10P62072 90 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 TCIRG1Q13488 830 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 LRRC14Q15048 493 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 BCL2A1Q16548 175 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 ZCWPW2Q504Y3 356 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 TDRD12Q587J7 1177 aaKnown RBP10.42□□□□□ -0.74
VPS8-225ENST00000492449 CCDC174Q6PII3 467 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 FOXR2Q6PJQ5 311 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 RGS9BPQ6ZS82 235 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 BARGINQ6ZT62 677 aa10.42□□□□□ -0.74
VPS8-225ENST00000492449 RUNDC3BQ96NL0 473 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms