RNA–Protein interactions for RNA: ENST00000492395.5

ZSWIM8-212, Transcript of zinc finger SWIM-type containing 8, human

TSL 1 (best)

Gene ZSWIM8, Length 4,490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZSWIM8-212	ENST00000492395	PCDHB4	Q9Y5E5	795 aa		13.36	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	DOT1L	Q8TEK3	1739 aa		13.36	□□□□□ -0.27
ZSWIM8-212	ENST00000492395		H0YCG3	227 aa		13.36	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	CIB2	O75838	187 aa		13.36	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	NR3C1	P04150	777 aa		13.36	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	PIK3CA	P42336	1068 aa		13.36	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	FAM160B1	Q5W0V3	765 aa		13.36	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	SWSAP1	Q6NVH7	229 aa		13.36	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.36	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	TEX13B	Q9BXU2	312 aa		13.36	□□□□□ -0.27
ZSWIM8-212	ENST00000492395		A0A087X0B3	334 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395		I3L4J1	428 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	RNF8	O76064	485 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	RHOBTB3	O94955	611 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	P4HB	P07237	508 aa	Known RBP	13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	CD44	P16070	742 aa	Known RBP	13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	GBP1	P32455	592 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	RPS6	P62753	249 aa	Known RBP	13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	TRIP13	Q15645	432 aa	Predicted RBP	13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	RSPH3	Q86UC2	560 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	EFCAB13	Q8IY85	973 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	ABI1	Q8IZP0	508 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	NEK9	Q8TD19	979 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	RILP	Q96NA2	401 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	MMS19	Q96T76	1030 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	DNAJC17	Q9NVM6	304 aa	Known RBP	13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	TBK1	Q9UHD2	729 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	PNMA3	Q9UL41	463 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	ECEL1	O95672	775 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	TROVE2	P10155	538 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	NMT1	P30419	496 aa	Known RBP	13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	YARS	P54577	528 aa	Known RBP	13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	DR1	Q01658	176 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	MAP7D1	Q3KQU3	841 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	TCP11	Q8WWU5	503 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	SNX24	Q9Y343	169 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	WNT7A	O00755	349 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	SLC16A4	O15374	487 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	GMCL1	Q96IK5	515 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	DDX47	Q9H0S4	455 aa	Known RBP	13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	TTLL3	Q9Y4R7	772 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	CCDC188	H7C350	402 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	NDC80	O14777	642 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	DDN	O94850	711 aa	Predicted RBP	13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	POLR2B	P30876	1174 aa	Known RBP	13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	SPATA4	Q8NEY3	305 aa		13.35	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	LRP6	O75581	1613 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	ZNF185	O15231	689 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	P4HA1	P13674	534 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	FXR2	P51116	673 aa	Known RBP eCLIP	13.34	□□□□□ -0.27	6e-8	■■■■■ 29.6
ZSWIM8-212	ENST00000492395	KRT76	Q01546	638 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	FUT2	Q10981	343 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	KNOP1	Q1ED39	458 aa	Known RBP	13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	CYP2W1	Q8TAV3	490 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	ZNF668	Q96K58	619 aa	Predicted RBP	13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	C7orf25	Q9BPX7	421 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	REEP2	Q9BRK0	252 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	PLAA	Q9Y263	795 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	SUN1	O94901	812 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	GYPC	P04921	128 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	HOXA7	P31268	230 aa	Predicted RBP	13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	RASSF2	P50749	326 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	YWHAE	P62258	255 aa	Known RBP	13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	LMNTD2	Q8IXW0	634 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	RNF10	Q8N5U6	811 aa	Known RBP	13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	MICAL1	Q8TDZ2	1067 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	FGR	P09769	529 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	SRGAP2C	P0DJJ0	459 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	JAK3	P52333	1124 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	GRB10	Q13322	594 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	BIRC2	Q13490	618 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	COG1	Q8WTW3	980 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	TBC1D31	Q96DN5	1066 aa		13.34	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	PPP1R3G	B7ZBB8	358 aa		13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	GOLGA8S	H3BPF8	625 aa		13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	RASGRF2	O14827	1237 aa		13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	MSH4	O15457	936 aa		13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	HIP1R	O75146	1068 aa		13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	STAM2	O75886	525 aa		13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	STK10	O94804	968 aa	Known RBP	13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	TNNC2	P02585	160 aa		13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	NR3C2	P08235	984 aa		13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	HSPA6	P17066	643 aa		13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	GCLM	P48507	274 aa		13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	EPHA7	Q15375	998 aa		13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	GLE1	Q53GS7	698 aa	Known RBP	13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	FAM83A	Q86UY5	434 aa		13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	CATSPER3	Q86XQ3	398 aa		13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	FBXO40	Q9UH90	709 aa		13.33	□□□□□ -0.27
ZSWIM8-212	ENST00000492395	NFIB	O00712	420 aa		13.33	□□□□□ -0.28
ZSWIM8-212	ENST00000492395	EYA4	O95677	639 aa		13.33	□□□□□ -0.28
ZSWIM8-212	ENST00000492395	PHB	P35232	272 aa		13.33	□□□□□ -0.28
ZSWIM8-212	ENST00000492395	BBOF1	Q8ND07	529 aa		13.33	□□□□□ -0.28
ZSWIM8-212	ENST00000492395	OSTN	P61366	133 aa		13.33	□□□□□ -0.28
ZSWIM8-212	ENST00000492395	E2F5	Q15329	346 aa		13.33	□□□□□ -0.28
ZSWIM8-212	ENST00000492395	SCYL3	Q8IZE3	742 aa		13.33	□□□□□ -0.28
ZSWIM8-212	ENST00000492395	TAAR1	Q96RJ0	339 aa		13.33	□□□□□ -0.28
ZSWIM8-212	ENST00000492395	COL1A1	P02452	1464 aa	Predicted RBP	13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 866 ms