RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 USP34Q70CQ2 3546 aa9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 CLASP2O75122 1294 aaKnown RBP9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 ZNF623O75123 536 aa9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 STBD1O95210 358 aa9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 MTHFRP42898 656 aa9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 VCPP55072 806 aaKnown RBP9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 PRKCEQ02156 737 aa9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 GIT2Q14161 759 aa9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 CES5AQ6NT32 575 aa9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 ZDHHC14Q8IZN3 488 aa9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 FAM177A1Q8N128 213 aaPredicted RBP9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 CCDC148Q8NFR7 591 aa9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 PHKBQ93100 1093 aa9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 PPP1R16BQ96T49 567 aa9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 NCOA5Q9HCD5 579 aaKnown RBP9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 SH3GLB2Q9NR46 395 aa9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 DZANK1Q9NVP4 752 aa9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 SORCS3Q9UPU3 1222 aa9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 USTQ9Y2C2 406 aa9.53□□□□□ -0.88
APOBEC3F-204ENST00000491387 CFAP54Q96N23 3096 aa9.52□□□□□ -0.88
APOBEC3F-204ENST00000491387 CYP3A7-CYP3A51PA0A087WV96 503 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 GALR2O43603 387 aaPredicted RBP9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 PSMD10O75832 226 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 SKIP12755 728 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 IFNAR1P17181 557 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 IBSPP21815 317 aaPredicted RBP9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 RPS6KB1P23443 525 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 CYP3A7P24462 503 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 PBX3P40426 434 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 PHKA2P46019 1235 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 ALDH7A1P49419 539 aaKnown RBP9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 BCAR1P56945 870 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 TBC1D8BQ0IIM8 1120 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 MTMR3Q13615 1198 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 TOB2Q14106 344 aaPredicted RBP9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 BMS1Q14692 1282 aaKnown RBP9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 UGCGQ16739 394 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 Q4G0T1 1027 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 XKR3Q5GH77 459 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 KIAA1841Q6NSI8 718 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 MOXD1Q6UVY6 613 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 DDX53Q86TM3 631 aaKnown RBP9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 ZNF410Q86VK4 478 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 PLCD3Q8N3E9 789 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 LRRC71Q8N4P6 559 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 KREMEN2Q8NCW0 462 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 HELQQ8TDG4 1101 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 SLC22A17Q8WUG5 538 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 MBOAT7Q96N66 472 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 GCOM2Q9BZD3 368 aaPredicted RBP9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 C22orf23Q9BZE7 217 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 INO80BQ9C086 356 aaPredicted RBP9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 ZBP1Q9H171 429 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 POMKQ9H5K3 350 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 STK39Q9UEW8 545 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 SAMM50Q9Y512 469 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 TRIP11Q15643 1979 aa9.52□□□□□ -0.89
APOBEC3F-204ENST00000491387 C2CD4DB7Z1M9 353 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 M0R2N6 131 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 GAS7O60861 476 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 BRD1O95696 1058 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 CTSAP10619 480 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 SFPQP23246 707 aaKnown RBP eCLIP9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 RAB27AP51159 221 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 CCT2P78371 535 aaKnown RBP9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 DRP2Q13474 957 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 ATAT1Q5SQI0 421 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 LRCH2Q5VUJ6 765 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 LLGL2Q6P1M3 1020 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 TMEM169Q96HH4 297 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 IGSF21Q96ID5 467 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 AIFM3Q96NN9 605 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 TEKT3Q9BXF9 490 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 UNC45AQ9H3U1 944 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 PLXNA3P51805 1871 aa9.51□□□□□ -0.89
APOBEC3F-204ENST00000491387 TDRD15B5MCY1 1934 aaKnown RBP9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 EP300Q09472 2414 aaPredicted RBP9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 GFRA3O60609 400 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 MAFO75444 373 aaPredicted RBP9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 OFD1O75665 1012 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 PAPLNO95428 1278 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 CXCL14O95715 111 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 PDGFBP01127 241 aaPredicted RBP9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 GALTP07902 379 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 NBL1P41271 181 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 DNM2P50570 870 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 CLCN5P51795 746 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 FGD1P98174 961 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 AKAP17AQ02040 695 aaKnown RBP9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 BLOC1S2Q6QNY1 142 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 TRMT1LQ7Z2T5 733 aaKnown RBP9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 MRPL10Q7Z7H8 261 aaKnown RBP9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 ZBTB33Q86T24 672 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 PPFIBP1Q86W92 1011 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 TMEM173Q86WV6 379 aaPredicted RBP9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 VPS52Q8N1B4 723 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 DAGLBQ8NCG7 672 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 NLRP7Q8WX94 980 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 SNX27Q96L92 541 aa9.5□□□□□ -0.89
APOBEC3F-204ENST00000491387 JPH2Q9BR39 696 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms