RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 TAS1R3Q7RTX0 852 aa15.27■□□□□ 0.04
SMPD4-219ENST00000491128 TRIM59Q8IWR1 403 aa15.27■□□□□ 0.04
SMPD4-219ENST00000491128 BAG1Q99933 345 aaPredicted RBP15.27■□□□□ 0.04
SMPD4-219ENST00000491128 ARMCX3Q9UH62 379 aaPredicted RBP15.27■□□□□ 0.04
SMPD4-219ENST00000491128 GJD2Q9UKL4 321 aa15.27■□□□□ 0.04
SMPD4-219ENST00000491128 EXOC3O60645 756 aa15.27■□□□□ 0.03
SMPD4-219ENST00000491128 ACTN1P12814 892 aa15.27■□□□□ 0.03
SMPD4-219ENST00000491128 ADSSP30520 456 aa15.27■□□□□ 0.03
SMPD4-219ENST00000491128 CLCN3P51790 818 aa15.27■□□□□ 0.03
SMPD4-219ENST00000491128 INHBEP58166 350 aa15.27■□□□□ 0.03
SMPD4-219ENST00000491128 GTF2BQ00403 316 aa15.27■□□□□ 0.03
SMPD4-219ENST00000491128 KCNMA1Q12791 1236 aa15.27■□□□□ 0.03
SMPD4-219ENST00000491128 TARBP2Q15633 366 aaKnown RBP15.27■□□□□ 0.03
SMPD4-219ENST00000491128 OLFML2BQ68BL8 750 aa15.27■□□□□ 0.03
SMPD4-219ENST00000491128 MCPH1Q8NEM0 835 aa15.27■□□□□ 0.03
SMPD4-219ENST00000491128 OR6J1Q8NGC5 347 aa15.27■□□□□ 0.03
SMPD4-219ENST00000491128 AFAP1L1Q8TED9 768 aa15.27■□□□□ 0.03
SMPD4-219ENST00000491128 PRPF31Q8WWY3 499 aaKnown RBP15.27■□□□□ 0.03
SMPD4-219ENST00000491128 KIFAP3Q92845 792 aa15.27■□□□□ 0.03
SMPD4-219ENST00000491128 NIFKQ9BYG3 293 aaKnown RBP15.27■□□□□ 0.03
SMPD4-219ENST00000491128 ABHD16BQ9H3Z7 469 aa15.27■□□□□ 0.03
SMPD4-219ENST00000491128 TTLL13PA6NNM8 815 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 EDN1P05305 212 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 PSMC4P43686 418 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 TM4SF4P48230 202 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 DLG4P78352 724 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 PPP4R3CPQ6ZMV5 832 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 STXBP4Q6ZWJ1 553 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 FAM186BQ8IYM0 893 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 CAPNS2Q96L46 248 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 ACCSQ96QU6 501 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 A0A0U1RQJ8 604 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 CA12O43570 354 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 ZNF500O60304 480 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-219ENST00000491128 LGR5O75473 907 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 TNFAIP2Q03169 654 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 TRIM32Q13049 653 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 LAMC2Q13753 1193 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 DEFB115Q30KQ5 88 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 E4F1Q66K89 784 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-219ENST00000491128 SLC39A4Q6P5W5 647 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 TOGARAM2Q6ZUX3 1019 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 ATP8B4Q8TF62 1192 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 ATRIPQ8WXE1 791 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 ELMO3Q96BJ8 720 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 BICD1Q96G01 975 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 C16orf45Q96MC5 204 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-219ENST00000491128 NLRC4Q9NPP4 1024 aa15.26■□□□□ 0.03
SMPD4-219ENST00000491128 LRRN2O75325 713 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 MAPTP10636 758 aaKnown RBP15.25■□□□□ 0.03
SMPD4-219ENST00000491128 EPB41P11171 864 aaKnown RBP15.25■□□□□ 0.03
SMPD4-219ENST00000491128 INSRRP14616 1297 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 RPL13P26373 211 aaKnown RBP15.25■□□□□ 0.03
SMPD4-219ENST00000491128 BEX3Q00994 111 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 ZNF467Q7Z7K2 595 aaPredicted RBP15.25■□□□□ 0.03
SMPD4-219ENST00000491128 ZC3H3Q8IXZ2 948 aaKnown RBP15.25■□□□□ 0.03
SMPD4-219ENST00000491128 ZBTB45Q96K62 511 aaPredicted RBP15.25■□□□□ 0.03
SMPD4-219ENST00000491128 IFT74Q96LB3 600 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 CHP1Q99653 195 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 TMX1Q9H3N1 280 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 SMARCAD1Q9H4L7 1026 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 SIK3Q9Y2K2 1263 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.25■□□□□ 0.03
SMPD4-219ENST00000491128 MYH9P35579 1960 aaKnown RBP15.25■□□□□ 0.03
SMPD4-219ENST00000491128 TRPA1O75762 1119 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 XRCC5P13010 732 aaKnown RBP15.25■□□□□ 0.03
SMPD4-219ENST00000491128 SLC9A1P19634 815 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 CNGA1P29973 690 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 CAPSQ13938 189 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 DUSP28Q4G0W2 176 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 SEZ6Q53EL9 994 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 DNTTIP2Q5QJE6 756 aaKnown RBP15.25■□□□□ 0.03
SMPD4-219ENST00000491128 RHPN2Q8IUC4 686 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 BBXQ8WY36 941 aaPredicted RBP15.25■□□□□ 0.03
SMPD4-219ENST00000491128 C16orf70Q9BSU1 422 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 ABHD10Q9NUJ1 306 aa15.25■□□□□ 0.03
SMPD4-219ENST00000491128 MYH11P35749 1972 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 MKI67P46013 3256 aaKnown RBP15.24■□□□□ 0.03
SMPD4-219ENST00000491128 FAM170AA1A519 330 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 HNRNPDLO14979 420 aaKnown RBP15.24■□□□□ 0.03
SMPD4-219ENST00000491128 MYCNP04198 464 aaPredicted RBP15.24■□□□□ 0.03
SMPD4-219ENST00000491128 CLCN1P35523 988 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 CDR2LQ86X02 465 aaPredicted RBP15.24■□□□□ 0.03
SMPD4-219ENST00000491128 CBWD2Q8IUF1 395 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 ZNF784Q8NCA9 323 aaPredicted RBP15.24■□□□□ 0.03
SMPD4-219ENST00000491128 PPTC7Q8NI37 304 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 SLC35C1Q96A29 364 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 NLRP4Q96MN2 994 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 POP1Q99575 1024 aaKnown RBP15.24■□□□□ 0.03
SMPD4-219ENST00000491128 HSPBP1Q9NZL4 362 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 PLXNA1Q9UIW2 1896 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 ITIH6Q6UXX5 1313 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 WDR81Q562E7 1941 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 A0A1W2PQC6 194 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 RBM47A0AV96 593 aaKnown RBP15.24■□□□□ 0.03
SMPD4-219ENST00000491128 MAFO75444 373 aaPredicted RBP15.24■□□□□ 0.03
SMPD4-219ENST00000491128 ZNF865P0CJ78 1059 aaPredicted RBP15.24■□□□□ 0.03
SMPD4-219ENST00000491128 HARSP12081 509 aaKnown RBP15.24■□□□□ 0.03
SMPD4-219ENST00000491128 PSMC2P35998 433 aaKnown RBP15.24■□□□□ 0.03
SMPD4-219ENST00000491128 ARL2P36404 184 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms