RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 CFAP53Q96M91 514 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 SORCS2Q96PQ0 1159 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 DNAJC2Q99543 621 aaKnown RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 ZNF747Q9BV97 191 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 BTBD2Q9BX70 525 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 C1QTNF3Q9BXJ4 246 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 SCAND2PQ9GZW5 306 aaPredicted RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 MYH16Q9H6N6 1097 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 C14orf93Q9H972 538 aaKnown RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 KCNH7Q9NS40 1196 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 HSPBP1Q9NZL4 362 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 SAE1Q9UBE0 346 aaPredicted RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 OAZ3Q9UMX2 235 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 ZKSCAN5Q9Y2L8 839 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 LAS1LQ9Y4W2 734 aaKnown RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 ADCY10Q96PN6 1610 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 KDM5DQ9BY66 1539 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 CAMSAP2Q08AD1 1489 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 GRIN2AQ12879 1464 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 SHANK2Q9UPX8 1470 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 C9orf84Q5VXU9 1444 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 PRAG1Q86YV5 1406 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 ERBINQ96RT1 1412 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 CDC42BPBQ9Y5S2 1711 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 POLR3AO14802 1390 aaPredicted RBP2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 ZMYM3Q14202 1370 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 NINLQ9Y2I6 1382 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 KIAA0556O60303 1618 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 LAMC1P11047 1609 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 KIF14Q15058 1648 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 TRPM1Q7Z4N2 1603 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 CCDC163A0A0D9SF12 145 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 FAM221BA6H8Z2 402 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 PATE3B3GLJ2 98 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 B4E1Z4 1266 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 CYR61O00622 381 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 COL6A1P12109 1028 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 MCM7P33993 719 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 RGS3P49796 1198 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 NEK4P51957 841 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 KIF11P52732 1056 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 RARSP54136 660 aaKnown RBP2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 HERVK_113P62684 666 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 IL13RA1P78552 427 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 ATP2C1P98194 919 aaPredicted RBP2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 IRF9Q00978 393 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 SLC6A3Q01959 620 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 ABHD18Q0P651 414 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 FOXE3Q13461 319 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 TOP3AQ13472 1001 aaPredicted RBP2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 HDAC1Q13547 482 aaPredicted RBP2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 ACAP1Q15027 740 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 SF3A1Q15459 793 aaKnown RBP2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 FIGNQ5HY92 759 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 PRAMEF9Q5VWM5 478 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 ZKSCAN2Q63HK3 967 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 POLNQ7Z5Q5 900 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 TCP11L2Q8N4U5 519 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 SHCBP1Q8NEM2 672 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 NEU4Q8WWR8 484 aaPredicted RBP2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 ARHGAP45Q92619 1136 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 SNX21Q969T3 373 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 EXOC2Q96KP1 924 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 SSBP3Q9BWW4 388 aaPredicted RBP2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 PLA2G12BQ9BX93 195 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 KRTAP9-3Q9BYQ3 159 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 ZDHHC5Q9C0B5 715 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 KATNBL1Q9H079 304 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 OR10A5Q9H207 317 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 OR10A2Q9H208 303 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 SLC52A2Q9HAB3 445 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 CD248Q9HCU0 757 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 TLR9Q9NR96 1032 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 PLA2G3Q9NZ20 509 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 CHMP5Q9NZZ3 219 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 SAMD15Q9P1V8 674 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 SYNJ2O15056 1496 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 NKTRP30414 1462 aaKnown RBP2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 ABCC10Q5T3U5 1492 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 RTEL1-TNFRSF6BF6WH68 1400 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 PLCH2O75038 1416 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 BLMP54132 1417 aaPredicted RBP2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 SCAPERQ9BY12 1400 aa2.51□□□□□ -2.01
SNRNP40-207ENST00000491106 KANK1Q14678 1352 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 SPAG9O60271 1321 aaKnown RBP2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 USP19O94966 1318 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 IL16Q14005 1332 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 CENPJQ9HC77 1338 aaPredicted RBP2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 ADAMTS12P58397 1594 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 CEP170Q5SW79 1584 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 GOLGA6L3A6NEY3 463 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 C1QTNF3-AMACRE9PGA6 284 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 H7C1D1 291 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 ZNF561-AS1K7EIQ3 104 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 M0R2C6 588 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 ARVCFO00192 962 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 CYP27B1O15528 508 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 ADCY3O60266 1144 aa2.5□□□□□ -2.01
SNRNP40-207ENST00000491106 MFAP3LO75121 409 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 203.5 ms