RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 SMIM10L2BP0DMW5 78 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 ITGB5P18084 799 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 CMA1P23946 247 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 VARSP26640 1264 aaKnown RBP8.49□□□□□ -1.05
CLDN1-202ENST00000490800 DEFB103AP81534 67 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 AP3B2Q13367 1082 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 IKBKEQ14164 716 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 LETM2Q2VYF4 491 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 CCDC183Q5T5S1 534 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 RESP18Q5W5W9 173 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 MCTP2Q6DN12 878 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 FAM117BQ6P1L5 589 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 XRRA1Q6P2D8 792 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 SHC4Q6S5L8 630 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 VASH1Q7L8A9 365 aaPredicted RBP8.49□□□□□ -1.05
CLDN1-202ENST00000490800 SPRED2Q7Z698 418 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 ENGASEQ8NFI3 743 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 DBF4BQ8NFT6 615 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 MRPS27Q92552 414 aaKnown RBP8.49□□□□□ -1.05
CLDN1-202ENST00000490800 ANO3Q9BYT9 981 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 TMEM60Q9H2L4 133 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 VRTNQ9H8Y1 702 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 PLA2G2EQ9NZK7 142 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 MTCH2Q9Y6C9 303 aa8.49□□□□□ -1.05
CLDN1-202ENST00000490800 CUL9Q8IWT3 2517 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 CHD7Q9P2D1 2997 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 FAM237AA0A1B0GTK4 181 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 A0A1B0GVL5 298 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 GSTTP1A0A1W2PQM5 241 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 SPDYE3A6NKU9 549 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 CCNT1O60563 726 aaKnown RBP8.48□□□□□ -1.05
CLDN1-202ENST00000490800 LGR5O75473 907 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 FOSP01100 380 aaPredicted RBP8.48□□□□□ -1.05
CLDN1-202ENST00000490800 POU3F3P20264 500 aaPredicted RBP8.48□□□□□ -1.05
CLDN1-202ENST00000490800 HOXC8P31273 242 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 TCF7P36402 384 aaPredicted RBP8.48□□□□□ -1.05
CLDN1-202ENST00000490800 SLC19A1P41440 591 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 NDUFA8P51970 172 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 FAM160A1Q05DH4 1040 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 ORC2Q13416 577 aaPredicted RBP8.48□□□□□ -1.05
CLDN1-202ENST00000490800 SNW1Q13573 536 aaKnown RBP8.48□□□□□ -1.05
CLDN1-202ENST00000490800 IL17AQ16552 155 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 EML3Q32P44 896 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 ZSCAN23Q3MJ62 389 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.48□□□□□ -1.05
CLDN1-202ENST00000490800 CCDC73Q6ZRK6 1079 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 TRIM50Q86XT4 487 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 FMR1NBQ8N0W7 255 aaPredicted RBP8.48□□□□□ -1.05
CLDN1-202ENST00000490800 GIMAP8Q8ND71 665 aaPredicted RBP8.48□□□□□ -1.05
CLDN1-202ENST00000490800 ATXN2LQ8WWM7 1075 aaKnown RBP8.48□□□□□ -1.05
CLDN1-202ENST00000490800 CRYGNQ8WXF5 182 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 SEPT1Q8WYJ6 367 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 SYAP1Q96A49 352 aaPredicted RBP8.48□□□□□ -1.05
CLDN1-202ENST00000490800 GPRASP2Q96D09 838 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 ASB2Q96Q27 587 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 RAD9AQ99638 391 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 OSBPL7Q9BZF2 842 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 CSRNP2Q9H175 543 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 DACT1Q9NYF0 836 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 PKD2L1Q9P0L9 805 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 THEGQ9P2T0 379 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 CDV3Q9UKY7 258 aaKnown RBP8.48□□□□□ -1.05
CLDN1-202ENST00000490800 HPSEQ9Y251 543 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 UBIAD1Q9Y5Z9 338 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 TET1Q8NFU7 2136 aa8.48□□□□□ -1.05
CLDN1-202ENST00000490800 TRIP12Q14669 1992 aaPredicted RBP8.48□□□□□ -1.05
CLDN1-202ENST00000490800 MYO9BQ13459 2157 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 CYP3A7-CYP3A51PA0A087WV96 503 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 LAD1O00515 517 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 MAFGO15525 162 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 SLC37A4O43826 429 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 NEMFO60524 1076 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 EFCAB14O75071 495 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 GJB5O95377 273 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 TDP2O95551 362 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 CTSHP09668 335 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 GNAT1P11488 350 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 PFKFB1P16118 471 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 KCNA2P16389 499 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 CYP3A7P24462 503 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 SREBF1P36956 1147 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 USP11P51784 963 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 ADAM17P78536 824 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 MRPS5P82675 430 aaKnown RBP8.47□□□□□ -1.05
CLDN1-202ENST00000490800 ARHGAP4P98171 946 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 GRB10Q13322 594 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 MAP7D1Q3KQU3 841 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 PLEKHG4Q58EX7 1191 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 SPECC1Q5M775 1068 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 ARL6IP4Q66PJ3 421 aaKnown RBP8.47□□□□□ -1.05
CLDN1-202ENST00000490800 PPP4R3AQ6IN85 833 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 CYP2W1Q8TAV3 490 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 CDHR1Q96JP9 859 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 MBOAT7Q96N66 472 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 KCTD15Q96SI1 283 aaPredicted RBP8.47□□□□□ -1.05
CLDN1-202ENST00000490800 CLSTN2Q9H4D0 955 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 JADE2Q9NQC1 790 aa8.47□□□□□ -1.05
CLDN1-202ENST00000490800 DDX19AQ9NUU7 478 aaKnown RBP8.47□□□□□ -1.05
CLDN1-202ENST00000490800 ZNF215Q9UL58 517 aaPredicted RBP8.47□□□□□ -1.05
CLDN1-202ENST00000490800 MTUS1Q9ULD2 1270 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms