RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 MXD4Q14582 209 aaPredicted RBP17.11■□□□□ 0.33
VPS26A-207ENST00000490696 SLC24A5Q71RS6 500 aa17.11■□□□□ 0.33
VPS26A-207ENST00000490696 RNF149Q8NC42 400 aa17.11■□□□□ 0.33
VPS26A-207ENST00000490696 ASAP3Q8TDY4 903 aa17.11■□□□□ 0.33
VPS26A-207ENST00000490696 ZNF689Q96CS4 500 aaPredicted RBP17.11■□□□□ 0.33
VPS26A-207ENST00000490696 INO80BQ9C086 356 aaPredicted RBP17.11■□□□□ 0.33
VPS26A-207ENST00000490696 CERS4Q9HA82 394 aa17.11■□□□□ 0.33
VPS26A-207ENST00000490696 DDX19AQ9NUU7 478 aaKnown RBP17.11■□□□□ 0.33
VPS26A-207ENST00000490696 CLIC4Q9Y696 253 aa17.11■□□□□ 0.33
VPS26A-207ENST00000490696 ARHGEF35A5YM69 484 aa17.1■□□□□ 0.33
VPS26A-207ENST00000490696 DGKIO75912 1065 aa17.1■□□□□ 0.33
VPS26A-207ENST00000490696 SFPQP23246 707 aaKnown RBP eCLIP17.1■□□□□ 0.33
VPS26A-207ENST00000490696 GLRA2P23416 452 aa17.1■□□□□ 0.33
VPS26A-207ENST00000490696 ERVK-21P61565 698 aa17.1■□□□□ 0.33
VPS26A-207ENST00000490696 ADGRE1Q14246 886 aa17.1■□□□□ 0.33
VPS26A-207ENST00000490696 PTPAQ15257 358 aa17.1■□□□□ 0.33
VPS26A-207ENST00000490696 HYIQ5T013 277 aa17.1■□□□□ 0.33
VPS26A-207ENST00000490696 PADI6Q6TGC4 694 aa17.1■□□□□ 0.33
VPS26A-207ENST00000490696 SRGAP1Q7Z6B7 1085 aa17.1■□□□□ 0.33
VPS26A-207ENST00000490696 MCPH1Q8NEM0 835 aa17.1■□□□□ 0.33
VPS26A-207ENST00000490696 BHMT2Q9H2M3 363 aa17.1■□□□□ 0.33
VPS26A-207ENST00000490696 ZSCAN16Q9H4T2 348 aaPredicted RBP17.1■□□□□ 0.33
VPS26A-207ENST00000490696 MINDY3Q9H8M7 445 aa17.1■□□□□ 0.33
VPS26A-207ENST00000490696 STAG3L1P0CL83 205 aa17.09■□□□□ 0.33
VPS26A-207ENST00000490696 FOSL2P15408 326 aa17.09■□□□□ 0.33
VPS26A-207ENST00000490696 ZSCAN20P17040 1043 aaPredicted RBP17.09■□□□□ 0.33
VPS26A-207ENST00000490696 CYP11B2P19099 503 aa17.09■□□□□ 0.33
VPS26A-207ENST00000490696 PTENP60484 403 aa17.09■□□□□ 0.33
VPS26A-207ENST00000490696 GRIN1Q05586 938 aa17.09■□□□□ 0.33
VPS26A-207ENST00000490696 POU5F1BQ06416 359 aa17.09■□□□□ 0.33
VPS26A-207ENST00000490696 KCNK18Q7Z418 384 aa17.09■□□□□ 0.33
VPS26A-207ENST00000490696 IFNLR1Q8IU57 520 aaPredicted RBP17.09■□□□□ 0.33
VPS26A-207ENST00000490696 ARNTL2Q8WYA1 636 aa17.09■□□□□ 0.33
VPS26A-207ENST00000490696 AK8Q96MA6 479 aa17.09■□□□□ 0.33
VPS26A-207ENST00000490696 PNMA5Q96PV4 448 aa17.09■□□□□ 0.33
VPS26A-207ENST00000490696 TGS1Q96RS0 853 aaKnown RBP17.09■□□□□ 0.33
VPS26A-207ENST00000490696 COL25A1Q9BXS0 654 aaPredicted RBP17.09■□□□□ 0.33
VPS26A-207ENST00000490696 POLR3FQ9H1D9 316 aaPredicted RBP17.09■□□□□ 0.33
VPS26A-207ENST00000490696 GPRC5CQ9NQ84 441 aa17.09■□□□□ 0.33
VPS26A-207ENST00000490696 ADGRA3Q8IWK6 1321 aa17.09■□□□□ 0.33
VPS26A-207ENST00000490696 TRANK1O15050 2925 aa17.08■□□□□ 0.33
VPS26A-207ENST00000490696 E9PMD0 336 aa17.08■□□□□ 0.32
VPS26A-207ENST00000490696 RFXAPO00287 272 aa17.08■□□□□ 0.32
VPS26A-207ENST00000490696 EYA4O95677 639 aa17.08■□□□□ 0.32
VPS26A-207ENST00000490696 LINC00271P0C7V0 271 aa17.08■□□□□ 0.32
VPS26A-207ENST00000490696 PDIA4P13667 645 aaKnown RBP17.08■□□□□ 0.32
VPS26A-207ENST00000490696 PHKA2P46019 1235 aa17.08■□□□□ 0.32
VPS26A-207ENST00000490696 CAPSQ13938 189 aa17.08■□□□□ 0.32
VPS26A-207ENST00000490696 TFDP1Q14186 410 aa17.08■□□□□ 0.32
VPS26A-207ENST00000490696 MAEAQ7L5Y9 396 aa17.08■□□□□ 0.32
VPS26A-207ENST00000490696 CATSPER4Q7RTX7 472 aa17.08■□□□□ 0.32
VPS26A-207ENST00000490696 GAS2L1Q99501 681 aaPredicted RBP17.08■□□□□ 0.32
VPS26A-207ENST00000490696 C17orf80Q9BSJ5 609 aa17.08■□□□□ 0.32
VPS26A-207ENST00000490696 ELAC1Q9H777 363 aaKnown RBP17.08■□□□□ 0.32
VPS26A-207ENST00000490696 CHST12Q9NRB3 414 aa17.08■□□□□ 0.32
VPS26A-207ENST00000490696 TMEM161AQ9NX61 479 aa17.08■□□□□ 0.32
VPS26A-207ENST00000490696 LRFN2Q9ULH4 789 aa17.08■□□□□ 0.32
VPS26A-207ENST00000490696 DNM3Q9UQ16 869 aa17.08■□□□□ 0.32
VPS26A-207ENST00000490696 PCDHB7Q9Y5E2 793 aa17.08■□□□□ 0.32
VPS26A-207ENST00000490696 A0A0U1RQF3 1178 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 LPXNO60711 386 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 GATMP50440 423 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 GRB10Q13322 594 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 TMEM119Q4V9L6 283 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 FAM102BQ5T8I3 360 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 ECHDC2Q86YB7 292 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 CMTR2Q8IYT2 770 aaKnown RBP17.07■□□□□ 0.32
VPS26A-207ENST00000490696 FIBCD1Q8N539 461 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 KCTD17Q8N5Z5 321 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 SPRYD3Q8NCJ5 442 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 USP28Q96RU2 1077 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 TRAIPQ9BWF2 469 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 NFKBIZQ9BYH8 718 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 AGPAT5Q9NUQ2 364 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 DACT1Q9NYF0 836 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 MTUS1Q9ULD2 1270 aa17.07■□□□□ 0.32
VPS26A-207ENST00000490696 MORC2Q9Y6X9 1032 aaPredicted RBP17.07■□□□□ 0.32
VPS26A-207ENST00000490696 SLC26A4O43511 780 aa17.06■□□□□ 0.32
VPS26A-207ENST00000490696 IBSPP21815 317 aaPredicted RBP17.06■□□□□ 0.32
VPS26A-207ENST00000490696 MARCKSP29966 332 aaPredicted RBP17.06■□□□□ 0.32
VPS26A-207ENST00000490696 HOXA11P31270 313 aaPredicted RBP17.06■□□□□ 0.32
VPS26A-207ENST00000490696 LONP1P36776 959 aaKnown RBP17.06■□□□□ 0.32
VPS26A-207ENST00000490696 BTG3Q14201 252 aaPredicted RBP17.06■□□□□ 0.32
VPS26A-207ENST00000490696 ZRSR1Q15695 479 aaKnown RBP17.06■□□□□ 0.32
VPS26A-207ENST00000490696 CABP7Q86V35 215 aa17.06■□□□□ 0.32
VPS26A-207ENST00000490696 BSNDQ8WZ55 320 aa17.06■□□□□ 0.32
VPS26A-207ENST00000490696 CLP1Q92989 425 aaKnown RBP17.06■□□□□ 0.32
VPS26A-207ENST00000490696 NT5C3AQ9H0P0 336 aa17.06■□□□□ 0.32
VPS26A-207ENST00000490696 RNF19AQ9NV58 838 aa17.06■□□□□ 0.32
VPS26A-207ENST00000490696 FBXO2Q9UK22 296 aaPredicted RBP17.06■□□□□ 0.32
VPS26A-207ENST00000490696 PIN4Q9Y237 131 aaKnown RBP17.06■□□□□ 0.32
VPS26A-207ENST00000490696 EYSQ5T1H1 3165 aa17.06■□□□□ 0.32
VPS26A-207ENST00000490696 PRRC2BQ5JSZ5 2229 aaKnown RBP17.05■□□□□ 0.32
VPS26A-207ENST00000490696 UNC80Q8N2C7 3258 aa17.05■□□□□ 0.32
VPS26A-207ENST00000490696 ZSCAN22P10073 491 aaPredicted RBP17.05■□□□□ 0.32
VPS26A-207ENST00000490696 ATF7P17544 494 aaPredicted RBP17.05■□□□□ 0.32
VPS26A-207ENST00000490696 POU3F3P20264 500 aaPredicted RBP17.05■□□□□ 0.32
VPS26A-207ENST00000490696 UBA7P41226 1012 aa17.05■□□□□ 0.32
VPS26A-207ENST00000490696 NASPP49321 788 aaPredicted RBP17.05■□□□□ 0.32
VPS26A-207ENST00000490696 CEBPZQ03701 1054 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms