RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 UBXN2BQ14CS0 331 aa15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 LPAL2Q16609 132 aa15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 CMASQ8NFW8 434 aaPredicted RBP15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 BBXQ8WY36 941 aaPredicted RBP15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 NELL1Q92832 810 aa15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 SHDQ96IW2 340 aa15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 RPP25Q9BUL9 199 aaKnown RBP15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 EMILIN2Q9BXX0 1053 aa15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 JADE2Q9NQC1 790 aa15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 NUMBLQ9Y6R0 609 aa15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 MTCL1Q9Y4B5 1905 aaKnown RBP15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 ZZEF1O43149 2961 aa15.63■□□□□ 0.09
EXOSC3-207ENST00000490516 ZBTB42B2RXF5 422 aa15.63■□□□□ 0.09
EXOSC3-207ENST00000490516 ANHXE9PGG2 379 aa15.63■□□□□ 0.09
EXOSC3-207ENST00000490516 INPPL1O15357 1258 aa15.63■□□□□ 0.09
EXOSC3-207ENST00000490516 HBP1O60381 514 aa15.63■□□□□ 0.09
EXOSC3-207ENST00000490516 LAMP2P13473 410 aa15.63■□□□□ 0.09
EXOSC3-207ENST00000490516 PMLP29590 882 aa15.63■□□□□ 0.09
EXOSC3-207ENST00000490516 GPC5P78333 572 aa15.63■□□□□ 0.09
EXOSC3-207ENST00000490516 MYH9P35579 1960 aaKnown RBP15.63■□□□□ 0.09
EXOSC3-207ENST00000490516 CEP295Q9C0D2 2601 aa15.62■□□□□ 0.09
EXOSC3-207ENST00000490516 A0A0U1RQF3 1178 aa15.62■□□□□ 0.09
EXOSC3-207ENST00000490516 CCER2I3L3R5 266 aa15.62■□□□□ 0.09
EXOSC3-207ENST00000490516 RFPL2O75678 378 aa15.62■□□□□ 0.09
EXOSC3-207ENST00000490516 GALTP07902 379 aa15.62■□□□□ 0.09
EXOSC3-207ENST00000490516 CD72P21854 359 aa15.62■□□□□ 0.09
EXOSC3-207ENST00000490516 N4BP2L1Q5TBK1 243 aaPredicted RBP15.62■□□□□ 0.09
EXOSC3-207ENST00000490516 CYB5R4Q7L1T6 521 aa15.62■□□□□ 0.09
EXOSC3-207ENST00000490516 METTL13Q8N6R0 699 aa15.62■□□□□ 0.09
EXOSC3-207ENST00000490516 SMG7Q92540 1137 aaKnown RBP15.62■□□□□ 0.09
EXOSC3-207ENST00000490516 ZNF668Q96K58 619 aaPredicted RBP15.62■□□□□ 0.09
EXOSC3-207ENST00000490516 DDX23Q9BUQ8 820 aaKnown RBP15.62■□□□□ 0.09
EXOSC3-207ENST00000490516 NRDE2Q9H7Z3 1164 aa15.62■□□□□ 0.09
EXOSC3-207ENST00000490516 DNAJB4Q9UDY4 337 aa15.62■□□□□ 0.09
EXOSC3-207ENST00000490516 COL1A2P08123 1366 aa15.62■□□□□ 0.09
EXOSC3-207ENST00000490516 FAM170BA6NMN3 283 aa15.61■□□□□ 0.09
EXOSC3-207ENST00000490516 MAFGO15525 162 aa15.61■□□□□ 0.09
EXOSC3-207ENST00000490516 GDF9O60383 454 aa15.61■□□□□ 0.09
EXOSC3-207ENST00000490516 LILRB3O75022 631 aa15.61■□□□□ 0.09
EXOSC3-207ENST00000490516 C22orf31O95567 290 aa15.61■□□□□ 0.09
EXOSC3-207ENST00000490516 HNRNPUQ00839 825 aaKnown RBP eCLIP15.61■□□□□ 0.09
EXOSC3-207ENST00000490516 LONRF3Q496Y0 759 aa15.61■□□□□ 0.09
EXOSC3-207ENST00000490516 GET4Q7L5D6 327 aaPredicted RBP15.61■□□□□ 0.09
EXOSC3-207ENST00000490516 ZNF707Q96C28 371 aaPredicted RBP15.61■□□□□ 0.09
EXOSC3-207ENST00000490516 KRT23Q9C075 422 aa15.61■□□□□ 0.09
EXOSC3-207ENST00000490516 SENP2Q9HC62 589 aa15.61■□□□□ 0.09
EXOSC3-207ENST00000490516 KCNH7Q9NS40 1196 aa15.61■□□□□ 0.09
EXOSC3-207ENST00000490516 BACH1O14867 736 aa15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 B4GALT3O60512 393 aa15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 ATG7O95352 703 aa15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 PROS1P07225 676 aa15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 FGFR4P22455 802 aa15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 SLC11A1P49279 550 aa15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 SLC26A2P50443 739 aa15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 NLRP11P59045 1033 aaKnown RBP15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 ITGB3BPQ13352 177 aaPredicted RBP15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 MLF2Q15773 248 aaPredicted RBP15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 UBE2SQ16763 222 aa15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 ZNF484Q5JVG2 852 aa15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 LPPQ93052 612 aa15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 SDF4Q9BRK5 362 aa15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 GBP3Q9H0R5 595 aa15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 ADAMTS10Q9H324 1103 aa15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 TBC1D13Q9NVG8 400 aa15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 NFASCO94856 1347 aa15.6■□□□□ 0.09
EXOSC3-207ENST00000490516 WDR81Q562E7 1941 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 SETXQ7Z333 2677 aaKnown RBP15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 IGKV6D-21A0A0A0MT36 114 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 C2CD2LO14523 706 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 SPATA31D3P0C874 917 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 ATP4AP20648 1035 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 CLCN3P51790 818 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 SHC2P98077 582 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 SLC44A4Q53GD3 710 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 CYP26C1Q6V0L0 522 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 SPATA31D4Q6ZUB0 917 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 CCDC60Q8IWA6 550 aaPredicted RBP15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 FGF14Q92915 247 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 RHOBTB2Q9BYZ6 727 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 OSBPL6Q9BZF3 934 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 CNNM2Q9H8M5 875 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 LTB4R2Q9NPC1 389 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 MRPL17Q9NRX2 175 aaKnown RBP15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 ZMIZ1Q9ULJ6 1067 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 INPP5FQ9Y2H2 1132 aa15.59■□□□□ 0.09
EXOSC3-207ENST00000490516 DDX39AO00148 427 aaKnown RBP15.58■□□□□ 0.08
EXOSC3-207ENST00000490516 CCNE2O96020 404 aa15.58■□□□□ 0.08
EXOSC3-207ENST00000490516 EIF4BP23588 611 aaKnown RBP15.58■□□□□ 0.08
EXOSC3-207ENST00000490516 MFAP1P55081 439 aaKnown RBP15.58■□□□□ 0.08
EXOSC3-207ENST00000490516 LAIR1Q6GTX8 287 aa15.58■□□□□ 0.08
EXOSC3-207ENST00000490516 PARM1Q6UWI2 310 aa15.58■□□□□ 0.08
EXOSC3-207ENST00000490516 ABHD15Q6UXT9 468 aa15.58■□□□□ 0.08
EXOSC3-207ENST00000490516 PRR23CQ6ZRP0 262 aa15.58■□□□□ 0.08
EXOSC3-207ENST00000490516 TRMT1LQ7Z2T5 733 aaKnown RBP15.58■□□□□ 0.08
EXOSC3-207ENST00000490516 MXRA8Q9BRK3 442 aa15.58■□□□□ 0.08
EXOSC3-207ENST00000490516 PSTPIP2Q9H939 334 aa15.58■□□□□ 0.08
EXOSC3-207ENST00000490516 PIDD1Q9HB75 910 aa15.58■□□□□ 0.08
EXOSC3-207ENST00000490516 PRMT8Q9NR22 394 aaPredicted RBP15.58■□□□□ 0.08
EXOSC3-207ENST00000490516 SEMA4GQ9NTN9 838 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms