RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 FAM102BQ5T8I3 360 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 ECHDC2Q86YB7 292 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 MRPS27Q92552 414 aaKnown RBP11.62□□□□□ -0.55
TTC28-207ENST00000490475 TMX3Q96JJ7 454 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 MBOAT7Q96N66 472 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 ZNF558Q96NG5 402 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 LLPHQ9BRT6 129 aaKnown RBP11.62□□□□□ -0.55
TTC28-207ENST00000490475 TRAIPQ9BWF2 469 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 UNC45AQ9H3U1 944 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 DDX25Q9UHL0 483 aaKnown RBP11.62□□□□□ -0.55
TTC28-207ENST00000490475 PIEZO1Q92508 2521 aa11.62□□□□□ -0.55
TTC28-207ENST00000490475 MUC6Q6W4X9 2439 aa11.61□□□□□ -0.55
TTC28-207ENST00000490475 HOXB8P17481 243 aaPredicted RBP11.61□□□□□ -0.55
TTC28-207ENST00000490475 IBSPP21815 317 aaPredicted RBP11.61□□□□□ -0.55
TTC28-207ENST00000490475 DNAJB1P25685 340 aa11.61□□□□□ -0.55
TTC28-207ENST00000490475 ALDH7A1P49419 539 aaKnown RBP11.61□□□□□ -0.55
TTC28-207ENST00000490475 GIT2Q14161 759 aa11.61□□□□□ -0.55
TTC28-207ENST00000490475 HERC4Q5GLZ8 1057 aaPredicted RBP11.61□□□□□ -0.55
TTC28-207ENST00000490475 PPP4R3AQ6IN85 833 aa11.61□□□□□ -0.55
TTC28-207ENST00000490475 KCNT2Q6UVM3 1135 aa11.61□□□□□ -0.55
TTC28-207ENST00000490475 TMEM184AQ6ZMB5 413 aa11.61□□□□□ -0.55
TTC28-207ENST00000490475 LRRC71Q8N4P6 559 aa11.61□□□□□ -0.55
TTC28-207ENST00000490475 SLC7A3Q8WY07 619 aa11.61□□□□□ -0.55
TTC28-207ENST00000490475 KHSRPQ92945 711 aaKnown RBP eCLIP11.61□□□□□ -0.55
TTC28-207ENST00000490475 MFSD14AQ96MC6 490 aa11.61□□□□□ -0.55
TTC28-207ENST00000490475 PPP1R16BQ96T49 567 aa11.61□□□□□ -0.55
TTC28-207ENST00000490475 CWH43Q9H720 699 aa11.61□□□□□ -0.55
TTC28-207ENST00000490475 BRMS1Q9HCU9 246 aa11.61□□□□□ -0.55
TTC28-207ENST00000490475 C11orf16Q9NQ32 467 aa11.61□□□□□ -0.55
TTC28-207ENST00000490475 SPG21Q9NZD8 308 aa11.61□□□□□ -0.55
TTC28-207ENST00000490475 SEPT9Q9UHD8 586 aaPredicted RBP11.61□□□□□ -0.55
TTC28-207ENST00000490475 IGKV6-21A0A0C4DH24 114 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 FSCN2O14926 492 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 MARCH6O60337 910 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 BAG4O95429 457 aaKnown RBP11.6□□□□□ -0.55
TTC28-207ENST00000490475 FGFR1P11362 822 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 IRS1P35568 1242 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 QARSP47897 775 aaKnown RBP11.6□□□□□ -0.55
TTC28-207ENST00000490475 GATMP50440 423 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 GUCY1B3Q02153 619 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 DLX2Q07687 328 aaPredicted RBP11.6□□□□□ -0.55
TTC28-207ENST00000490475 NR5A1Q13285 461 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 PPP2R5CQ13362 524 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 PCBP1Q15365 356 aaKnown RBP eCLIP11.6□□□□□ -0.55
TTC28-207ENST00000490475 CLUL1Q15846 466 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 DUSP6Q16828 381 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 INF2Q27J81 1249 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 MTERF2Q49AM1 385 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 EARS2Q5JPH6 523 aaKnown RBP11.6□□□□□ -0.55
TTC28-207ENST00000490475 B3GNT9Q6UX72 402 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 OTUD6AQ7L8S5 288 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 NEK8Q86SG6 692 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 RBM23Q86U06 439 aaKnown RBP11.6□□□□□ -0.55
TTC28-207ENST00000490475 SLFN12Q8IYM2 578 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 ETNPPLQ8TBG4 499 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 CASD1Q96PB1 797 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 PHF7Q9BWX1 381 aaPredicted RBP11.6□□□□□ -0.55
TTC28-207ENST00000490475 ENTPD7Q9NQZ7 604 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 CLEC1BQ9P126 229 aa11.6□□□□□ -0.55
TTC28-207ENST00000490475 FAM86C2PA6NEL3 165 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 FAM205CA6NFA0 338 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 DDX11L8A8MPP1 907 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 BTBD18B2RXH4 712 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 LINC01565O15544 149 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 ASAP2O43150 1006 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 MAFO75444 373 aaPredicted RBP11.59□□□□□ -0.55
TTC28-207ENST00000490475 CSPG5O95196 566 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 TDP2O95551 362 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 P4HBP07237 508 aaKnown RBP11.59□□□□□ -0.55
TTC28-207ENST00000490475 PRKCSHP14314 528 aaPredicted RBP11.59□□□□□ -0.55
TTC28-207ENST00000490475 GTF2F1P35269 517 aaKnown RBP eCLIP11.59□□□□□ -0.55
TTC28-207ENST00000490475 RFC5P40937 340 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 MCM2P49736 904 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 TRIM29Q14134 588 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 SMC1AQ14683 1233 aaKnown RBP11.59□□□□□ -0.55
TTC28-207ENST00000490475 UGCGQ16739 394 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 LETM2Q2VYF4 491 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 TPRNQ4KMQ1 711 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 TWF2Q6IBS0 349 aaKnown RBP11.59□□□□□ -0.55
TTC28-207ENST00000490475 PIK3AP1Q6ZUJ8 805 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 TMC7Q7Z402 723 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 ADGRD2Q7Z7M1 963 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 RNF135Q8IUD6 432 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 TMEM87AQ8NBN3 555 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 TCP11Q8WWU5 503 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 CASP10Q92851 521 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 GJA10Q969M2 543 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 PGBD4Q96DM1 585 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 TMEM169Q96HH4 297 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 PRRX2Q99811 253 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 TCF25Q9BQ70 676 aa11.59□□□□□ -0.55
TTC28-207ENST00000490475 SUCLA2Q9P2R7 463 aaPredicted RBP11.59□□□□□ -0.55
TTC28-207ENST00000490475 DAXXQ9UER7 740 aaPredicted RBP11.59□□□□□ -0.55
TTC28-207ENST00000490475 LOC730098B7Z3J9 87 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 ZNF623O75123 536 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 KRT2P35908 639 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 ANP32AP39687 249 aaKnown RBP11.58□□□□□ -0.56
TTC28-207ENST00000490475 POLGP54098 1239 aaPredicted RBP11.58□□□□□ -0.56
TTC28-207ENST00000490475 HMGN5P82970 282 aaKnown RBP11.58□□□□□ -0.56
TTC28-207ENST00000490475 ITIH3Q06033 890 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms