RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 MIA3Q5JRA6 1907 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 CELSR3Q9NYQ7 3312 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 MYH6P13533 1939 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 TBKBP1A7MCY6 615 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 OPLAHO14841 1288 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 FOXP2O15409 715 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 MGEA5O60502 916 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 LILRB5O75023 590 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 N4BP1O75113 896 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 LRRN2O75325 713 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 PROCP04070 461 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 TOP1P11387 765 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 SARSP49591 514 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 MRPS6P82932 125 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 ARID5BQ14865 1188 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 HSP90AB4PQ58FF6 505 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 SPOUT1Q5T280 376 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 FAM102BQ5T8I3 360 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 OTOP3Q7RTS5 596 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 VSIG10LQ86VR7 867 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 MRPL43Q8N983 215 aaKnown RBP8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 NETO1Q8TDF5 533 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 DNAJB3Q8WWF6 145 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 FRAT1Q92837 279 aaPredicted RBP8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 ACSF2Q96CM8 615 aaPredicted RBP8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 GPR20Q99678 358 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 MLXIPQ9HAP2 919 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 DZANK1Q9NVP4 752 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 IGSF9Q9P2J2 1179 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 FBXO4Q9UKT5 387 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 CA14Q9ULX7 337 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 SIT1Q9Y3P8 196 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 SQORQ9Y6N5 450 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 F5P12259 2224 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 ABCB11O95342 1321 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 IGSF9BQ9UPX0 1349 aa8.29□□□□□ -1.08
PDLIM1-203ENST00000490391 TTLL8A6PVC2 850 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 APPP05067 770 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 SLC3A2P08195 630 aaKnown RBP8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 FGRP09769 529 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 HSPD1P10809 573 aaKnown RBP8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 LAG3P18627 525 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 GRM5P41594 1212 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 HSD17B4P51659 736 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 MARCH8Q5T0T0 291 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 LRRC55Q6ZSA7 311 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 CCDC149Q6ZUS6 474 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 STOX1Q6ZVD7 989 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 TMC7Q7Z402 723 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 GPR149Q86SP6 731 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 MCF2L2Q86YR7 1114 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 KBTBD3Q8NAB2 608 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 PJA1Q8NG27 643 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 RSAD2Q8WXG1 361 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 ARHGEF3Q9NR81 526 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 TUBE1Q9UJT0 475 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 HECTD1Q9ULT8 2610 aa8.28□□□□□ -1.08
PDLIM1-203ENST00000490391 SDK1Q7Z5N4 2213 aa8.27□□□□□ -1.08
PDLIM1-203ENST00000490391 COL4A3Q01955 1670 aa8.27□□□□□ -1.08
PDLIM1-203ENST00000490391 K7ELQ4 463 aaPredicted RBP8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 NOP56O00567 594 aaKnown RBP8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 RNF113AO15541 343 aaKnown RBP8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 ORC4O43929 436 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 SRFP11831 508 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 RLBP1P12271 317 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 MYCLP12524 364 aaPredicted RBP8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 EPCAMP16422 314 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 PBX3P40426 434 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 CTDSPL2Q05D32 466 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 SEMA3FQ13275 785 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 SMC1AQ14683 1233 aaKnown RBP8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 PGM5Q15124 567 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 CDC37Q16543 378 aaPredicted RBP8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 N4BP2L1Q5TBK1 243 aaPredicted RBP8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 LYPD4Q6UWN0 246 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 METTL7BQ6UX53 244 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 TMC5Q6UXY8 1006 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 RSPH3Q86UC2 560 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 GPR152Q8TDT2 470 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 SLC22A17Q8WUG5 538 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 ZBTB10Q96DT7 871 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 SEC62Q99442 399 aaKnown RBP8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 FOXQ1Q9C009 403 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 NAPBQ9H115 298 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 PUF60Q9UHX1 559 aaKnown RBP8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 ZNF215Q9UL58 517 aaPredicted RBP8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 LRFN2Q9ULH4 789 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 ZMIZ1Q9ULJ6 1067 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 PCDHGC3Q9UN70 934 aa8.27□□□□□ -1.09
PDLIM1-203ENST00000490391 C9IYK1 514 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 RANBP6O60518 1105 aaKnown RBP8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 CFBP00751 764 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 GOLGA8HP0CJ92 632 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 RFX1P22670 979 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 PPM1AP35813 382 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 PPFIA1Q13136 1202 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 PAK2Q13177 524 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 GRIK4Q16099 956 aa8.26□□□□□ -1.09
PDLIM1-203ENST00000490391 UTP14CQ5TAP6 766 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms