RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 LOXHD1Q8IVV2 1947 aa19.47■□□□□ 0.71
SEC13-218ENST00000490283 POTEMA6NI47 508 aa19.46■□□□□ 0.71
SEC13-218ENST00000490283 GRM6O15303 877 aa19.46■□□□□ 0.71
SEC13-218ENST00000490283 NCK2O43639 380 aa19.46■□□□□ 0.71
SEC13-218ENST00000490283 CSDE1O75534 798 aaKnown RBP19.46■□□□□ 0.71
SEC13-218ENST00000490283 SKIP12755 728 aa19.46■□□□□ 0.71
SEC13-218ENST00000490283 ZNF174Q15697 407 aa19.46■□□□□ 0.71
SEC13-218ENST00000490283 TWF2Q6IBS0 349 aaKnown RBP19.46■□□□□ 0.71
SEC13-218ENST00000490283 KSR1Q8IVT5 923 aa19.46■□□□□ 0.71
SEC13-218ENST00000490283 ZNF579Q8NAF0 562 aaKnown RBP19.46■□□□□ 0.71
SEC13-218ENST00000490283 PRPF31Q8WWY3 499 aaKnown RBP19.46■□□□□ 0.71
SEC13-218ENST00000490283 UHRF1Q96T88 793 aaPredicted RBP19.46■□□□□ 0.71
SEC13-218ENST00000490283 TMEM60Q9H2L4 133 aa19.46■□□□□ 0.71
SEC13-218ENST00000490283 ALG13Q9NP73 1137 aaKnown RBP19.46■□□□□ 0.71
SEC13-218ENST00000490283 PLAGL2Q9UPG8 496 aa19.46■□□□□ 0.71
SEC13-218ENST00000490283 A0A0C4DFX4 3053 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 PRUNE2Q8WUY3 3088 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 A0A0U1RQF3 1178 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 DGAT1O75907 488 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 EOMESO95936 686 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 SRGAP2CP0DJJ0 459 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 LAG3P18627 525 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 LAMTOR4Q0VGL1 99 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 TFDP1Q14186 410 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 MXD4Q14582 209 aaPredicted RBP19.45■□□□□ 0.7
SEC13-218ENST00000490283 TCEAL5Q5H9L2 206 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 EP400NLQ6ZTU2 488 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 SRGAP1Q7Z6B7 1085 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 LRRC43Q8N309 656 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 KLHL23Q8NBE8 558 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 TMX3Q96JJ7 454 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 TUFT1Q9NNX1 390 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 CUL9Q8IWT3 2517 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 TRANK1O15050 2925 aa19.45■□□□□ 0.7
SEC13-218ENST00000490283 NLRC5Q86WI3 1866 aa19.44■□□□□ 0.7
SEC13-218ENST00000490283 CSPG5O95196 566 aa19.44■□□□□ 0.7
SEC13-218ENST00000490283 TECP42680 631 aa19.44■□□□□ 0.7
SEC13-218ENST00000490283 PHKA2P46019 1235 aa19.44■□□□□ 0.7
SEC13-218ENST00000490283 RAB27AP51159 221 aa19.44■□□□□ 0.7
SEC13-218ENST00000490283 KCNQ1P51787 676 aa19.44■□□□□ 0.7
SEC13-218ENST00000490283 HAUS3Q68CZ6 603 aa19.44■□□□□ 0.7
SEC13-218ENST00000490283 THNSL1Q8IYQ7 743 aa19.44■□□□□ 0.7
SEC13-218ENST00000490283 RSPH1Q8WYR4 309 aa19.44■□□□□ 0.7
SEC13-218ENST00000490283 TBC1D32Q96NH3 1257 aa19.44■□□□□ 0.7
SEC13-218ENST00000490283 TYW1Q9NV66 732 aaKnown RBP19.44■□□□□ 0.7
SEC13-218ENST00000490283 H3BQV1 296 aa19.43■□□□□ 0.7
SEC13-218ENST00000490283 ZBTB39O15060 712 aa19.43■□□□□ 0.7
SEC13-218ENST00000490283 ITGB1P05556 798 aa19.43■□□□□ 0.7
SEC13-218ENST00000490283 XRCC6P12956 609 aaKnown RBP eCLIP19.43■□□□□ 0.7
SEC13-218ENST00000490283 KCNA5P22460 613 aa19.43■□□□□ 0.7
SEC13-218ENST00000490283 U2AF2P26368 475 aaKnown RBP eCLIP19.43■□□□□ 0.7
SEC13-218ENST00000490283 UBE3AQ05086 875 aa19.43■□□□□ 0.7
SEC13-218ENST00000490283 NCBP1Q09161 790 aaKnown RBP19.43■□□□□ 0.7
SEC13-218ENST00000490283 MCTP1Q6DN14 999 aa19.43■□□□□ 0.7
SEC13-218ENST00000490283 FERMT3Q86UX7 667 aa19.43■□□□□ 0.7
SEC13-218ENST00000490283 RNF149Q8NC42 400 aa19.43■□□□□ 0.7
SEC13-218ENST00000490283 POF1BQ8WVV4 589 aa19.43■□□□□ 0.7
SEC13-218ENST00000490283 MRPL9Q9BYD2 267 aaKnown RBP19.43■□□□□ 0.7
SEC13-218ENST00000490283 RAB34Q9BZG1 259 aa19.43■□□□□ 0.7
SEC13-218ENST00000490283 IFT122Q9HBG6 1241 aa19.43■□□□□ 0.7
SEC13-218ENST00000490283 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.42■□□□□ 0.7
SEC13-218ENST00000490283 TNFRSF10AO00220 468 aa19.42■□□□□ 0.7
SEC13-218ENST00000490283 ERLIN2O94905 339 aa19.42■□□□□ 0.7
SEC13-218ENST00000490283 BMP1P13497 986 aa19.42■□□□□ 0.7
SEC13-218ENST00000490283 RARRES1P49788 294 aa19.42■□□□□ 0.7
SEC13-218ENST00000490283 COLGALT1Q8NBJ5 622 aa19.42■□□□□ 0.7
SEC13-218ENST00000490283 SPPL3Q8TCT6 385 aa19.42■□□□□ 0.7
SEC13-218ENST00000490283 PIGOQ8TEQ8 1089 aa19.42■□□□□ 0.7
SEC13-218ENST00000490283 PABPC5Q96DU9 382 aaKnown RBP19.42■□□□□ 0.7
SEC13-218ENST00000490283 CASD1Q96PB1 797 aa19.42■□□□□ 0.7
SEC13-218ENST00000490283 NACC1Q96RE7 527 aa19.42■□□□□ 0.7
SEC13-218ENST00000490283 POLR3CQ9BUI4 534 aaPredicted RBP19.42■□□□□ 0.7
SEC13-218ENST00000490283 TRAIPQ9BWF2 469 aa19.42■□□□□ 0.7
SEC13-218ENST00000490283 AGPAT5Q9NUQ2 364 aa19.42■□□□□ 0.7
SEC13-218ENST00000490283 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.42■□□□□ 0.7
SEC13-218ENST00000490283 STK24Q9Y6E0 443 aa19.42■□□□□ 0.7
SEC13-218ENST00000490283 USO1O60763 962 aaKnown RBP19.41■□□□□ 0.7
SEC13-218ENST00000490283 PPM1AP35813 382 aa19.41■□□□□ 0.7
SEC13-218ENST00000490283 PCBP1Q15365 356 aaKnown RBP eCLIP19.41■□□□□ 0.7
SEC13-218ENST00000490283 CATSPER3Q86XQ3 398 aa19.41■□□□□ 0.7
SEC13-218ENST00000490283 HELQQ8TDG4 1101 aa19.41■□□□□ 0.7
SEC13-218ENST00000490283 MICAL1Q8TDZ2 1067 aa19.41■□□□□ 0.7
SEC13-218ENST00000490283 PGBD4Q96DM1 585 aa19.41■□□□□ 0.7
SEC13-218ENST00000490283 ZNF558Q96NG5 402 aa19.41■□□□□ 0.7
SEC13-218ENST00000490283 FAM105AQ9NUU6 356 aa19.41■□□□□ 0.7
SEC13-218ENST00000490283 CLDND1Q9NY35 253 aa19.41■□□□□ 0.7
SEC13-218ENST00000490283 PUF60Q9UHX1 559 aaKnown RBP19.41■□□□□ 0.7
SEC13-218ENST00000490283 SMC3Q9UQE7 1217 aa19.41■□□□□ 0.7
SEC13-218ENST00000490283 LAD1O00515 517 aa19.4■□□□□ 0.7
SEC13-218ENST00000490283 FGF18O76093 207 aa19.4■□□□□ 0.7
SEC13-218ENST00000490283 GJB2P29033 226 aa19.4■□□□□ 0.7
SEC13-218ENST00000490283 PUS10Q3MIT2 529 aaKnown RBP19.4■□□□□ 0.7
SEC13-218ENST00000490283 LEXMQ3ZCV2 418 aa19.4■□□□□ 0.7
SEC13-218ENST00000490283 GLB1LQ6UWU2 654 aa19.4■□□□□ 0.7
SEC13-218ENST00000490283 ZNF598Q86UK7 904 aaKnown RBP19.4■□□□□ 0.7
SEC13-218ENST00000490283 MCPH1Q8NEM0 835 aa19.4■□□□□ 0.7
SEC13-218ENST00000490283 CWH43Q9H720 699 aa19.4■□□□□ 0.7
SEC13-218ENST00000490283 XPNPEP1Q9NQW7 623 aa19.4■□□□□ 0.7
SEC13-218ENST00000490283 RNF19AQ9NV58 838 aa19.4■□□□□ 0.7
SEC13-218ENST00000490283 DBR1Q9UK59 544 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms