RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 LRRC55Q6ZSA7 311 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 ZNF410Q86VK4 478 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 ECHDC2Q86YB7 292 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 SLFN12Q8IYM2 578 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 CASD1Q96PB1 797 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 TMEM117Q9H0C3 514 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 CWH43Q9H720 699 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 ATP6V0A4Q9HBG4 840 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 LRFN2Q9ULH4 789 aa10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 FNDC1Q4ZHG4 1894 aaPredicted RBP10.91□□□□□ -0.66
TMEM39A-210ENST00000490099 WNT7AO00755 349 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 SLITRK3O94933 977 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 FGFR1P11362 822 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 DNM2P50570 870 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 NPEPPSP55786 919 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 PLCB3Q01970 1234 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 DLX2Q07687 328 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 CSPP1Q1MSJ5 1256 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 MTERF2Q49AM1 385 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 PAN2Q504Q3 1202 aaKnown RBP10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 PTCRAQ6ISU1 281 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 EXOC8Q8IYI6 725 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 EFCAB3Q8N7B9 438 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 RSPH1Q8WYR4 309 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 PPP1R16BQ96T49 567 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 JPH2Q9BR39 696 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 SH2D3AQ9BRG2 576 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 LLPHQ9BRT6 129 aaKnown RBP10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 GCOM2Q9BZD3 368 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 ZSWIM4Q9H7M6 989 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 IFT122Q9HBG6 1241 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 TYW1Q9NV66 732 aaKnown RBP10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 RGL1Q9NZL6 768 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 SUCLA2Q9P2R7 463 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 SEPT9Q9UHD8 586 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 LIMCH1Q9UPQ0 1083 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 LZTS1Q9Y250 596 aa10.9□□□□□ -0.66
TMEM39A-210ENST00000490099 ATG2AQ2TAZ0 1938 aa10.9□□□□□ -0.67
TMEM39A-210ENST00000490099 A0A087WZ62 844 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 TBKBP1A7MCY6 615 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 FSCN2O14926 492 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 HOXA2O43364 376 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 CSDE1O75534 798 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 EYA4O95677 639 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 XRCC6P12956 609 aaKnown RBP eCLIP10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 ZSCAN20P17040 1043 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 IRS1P35568 1242 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 RFC5P40937 340 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 KCNC3Q14003 757 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 CLLU1OSQ5K130 101 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 PLA2G4FQ68DD2 849 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 PDE12Q6L8Q7 609 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 DIS3L2Q8IYB7 885 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 EFHBQ8N7U6 833 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 COLGALT1Q8NBJ5 622 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 POF1BQ8WVV4 589 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 KHSRPQ92945 711 aaKnown RBP eCLIP10.89□□□□□ -0.672e-7■■□□□ 13.8
TMEM39A-210ENST00000490099 ZNF668Q96K58 619 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 MSLNLQ96KJ4 702 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 FDXACB1Q9BRP7 624 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 INO80BQ9C086 356 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 AAASQ9NRG9 546 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 DACT1Q9NYF0 836 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 HCSTQ9UBK5 93 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 PCDHA12Q9UN75 941 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 PCDHB12Q9Y5F1 795 aa10.89□□□□□ -0.67
TMEM39A-210ENST00000490099 PI4K2BG5E9Z4 385 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 H3BQ06 376 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 ZBTB39O15060 712 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 ASAP2O43150 1006 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 GAS2O43903 313 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 TBX10O75333 385 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 FGF18O76093 207 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 BAG4O95429 457 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 IL9P15248 144 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 LAG3P18627 525 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 FGFR4P22455 802 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 HOXA11P31270 313 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 YWHABP31946 246 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 GTF2F1P35269 517 aaKnown RBP eCLIP10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 PHKA2P46019 1235 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 RBM25P49756 843 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 POU5F1BQ06416 359 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 SMAD2Q15796 467 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 C8orf34Q49A92 452 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 TMEM184AQ6ZMB5 413 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 OTUD6AQ7L8S5 288 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 MRPL10Q7Z7H8 261 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 ADGRD2Q7Z7M1 963 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 KSR1Q8IVT5 923 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 PRPF31Q8WWY3 499 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 NLRP7Q8WX94 980 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 SLC7A3Q8WY07 619 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 CEP170P1Q96L14 293 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 LXNQ9BS40 222 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 EPHX3Q9H6B9 360 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 BRMS1Q9HCU9 246 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 ANKEF1Q9NU02 776 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 CLEC1BQ9P126 229 aa10.88□□□□□ -0.67
TMEM39A-210ENST00000490099 PRKAG3Q9UGI9 489 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms