RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 GJA10Q969M2 543 aa19.15■□□□□ 0.66
TOP3B-217ENST00000489581 SORCS3Q9UPU3 1222 aa19.15■□□□□ 0.66
TOP3B-217ENST00000489581 PLXNA3P51805 1871 aa19.15■□□□□ 0.66
TOP3B-217ENST00000489581 BRD1O95696 1058 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 HMGB1P09429 215 aaKnown RBP19.14■□□□□ 0.65
TOP3B-217ENST00000489581 DRP2Q13474 957 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 MTMR3Q13615 1198 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 BMS1Q14692 1282 aaKnown RBP19.14■□□□□ 0.65
TOP3B-217ENST00000489581 LONRF3Q496Y0 759 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 BMP2KLQ5H9B9 411 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 RARS2Q5T160 578 aaKnown RBP19.14■□□□□ 0.65
TOP3B-217ENST00000489581 KANK3Q6NY19 840 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 VPS52Q8N1B4 723 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 AUTS2Q8WXX7 1259 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 BRF1Q92994 677 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 TMEM169Q96HH4 297 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 CCDC136Q96JN2 1154 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 NECTIN4Q96NY8 510 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 MRPL9Q9BYD2 267 aaKnown RBP19.14■□□□□ 0.65
TOP3B-217ENST00000489581 IRF2BPLQ9H1B7 796 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 SMOC2Q9H3U7 446 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 DACT1Q9NYF0 836 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 FAM186AA6NE01 2351 aa19.14■□□□□ 0.65
TOP3B-217ENST00000489581 GAS7O60861 476 aa19.13■□□□□ 0.65
TOP3B-217ENST00000489581 ZC3H11AO75152 810 aaKnown RBP eCLIP19.13■□□□□ 0.65
TOP3B-217ENST00000489581 MTHFRP42898 656 aa19.13■□□□□ 0.65
TOP3B-217ENST00000489581 AKAP17AQ02040 695 aaKnown RBP19.13■□□□□ 0.65
TOP3B-217ENST00000489581 UBALD2Q8IYN6 164 aa19.13■□□□□ 0.65
TOP3B-217ENST00000489581 TMEM87AQ8NBN3 555 aa19.13■□□□□ 0.65
TOP3B-217ENST00000489581 BICD2Q8TD16 824 aa19.13■□□□□ 0.65
TOP3B-217ENST00000489581 UNC45AQ9H3U1 944 aa19.13■□□□□ 0.65
TOP3B-217ENST00000489581 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.12■□□□□ 0.65
TOP3B-217ENST00000489581 ASGR2P07307 311 aa19.12■□□□□ 0.65
TOP3B-217ENST00000489581 EPCAMP16422 314 aa19.12■□□□□ 0.65
TOP3B-217ENST00000489581 TARBP2Q15633 366 aaKnown RBP19.12■□□□□ 0.65
TOP3B-217ENST00000489581 MTERF2Q49AM1 385 aa19.12■□□□□ 0.65
TOP3B-217ENST00000489581 LRCH2Q5VUJ6 765 aa19.12■□□□□ 0.65
TOP3B-217ENST00000489581 TMEM173Q86WV6 379 aaPredicted RBP19.12■□□□□ 0.65
TOP3B-217ENST00000489581 LPPQ93052 612 aa19.12■□□□□ 0.65
TOP3B-217ENST00000489581 RIT2Q99578 217 aa19.12■□□□□ 0.65
TOP3B-217ENST00000489581 SH2D3AQ9BRG2 576 aa19.12■□□□□ 0.65
TOP3B-217ENST00000489581 TEKT3Q9BXF9 490 aa19.12■□□□□ 0.65
TOP3B-217ENST00000489581 GCOM2Q9BZD3 368 aaPredicted RBP19.12■□□□□ 0.65
TOP3B-217ENST00000489581 ZBP1Q9H171 429 aa19.12■□□□□ 0.65
TOP3B-217ENST00000489581 VPS54Q9P1Q0 977 aa19.12■□□□□ 0.65
TOP3B-217ENST00000489581 LIMD1Q9UGP4 676 aa19.12■□□□□ 0.65
TOP3B-217ENST00000489581 SPTBN4Q9H254 2564 aa19.11■□□□□ 0.65
TOP3B-217ENST00000489581 A0A087WZ62 844 aa19.11■□□□□ 0.65
TOP3B-217ENST00000489581 TMEM150BA6NC51 233 aa19.11■□□□□ 0.65
TOP3B-217ENST00000489581 GALR2O43603 387 aaPredicted RBP19.11■□□□□ 0.65
TOP3B-217ENST00000489581 SFNP31947 248 aa19.11■□□□□ 0.65
TOP3B-217ENST00000489581 PHKA2P46019 1235 aa19.11■□□□□ 0.65
TOP3B-217ENST00000489581 JAK3P52333 1124 aa19.11■□□□□ 0.65
TOP3B-217ENST00000489581 TWF2Q6IBS0 349 aaKnown RBP19.11■□□□□ 0.65
TOP3B-217ENST00000489581 MIER3Q7Z3K6 550 aa19.11■□□□□ 0.65
TOP3B-217ENST00000489581 SLC5A5Q92911 643 aa19.11■□□□□ 0.65
TOP3B-217ENST00000489581 SNX27Q96L92 541 aa19.11■□□□□ 0.65
TOP3B-217ENST00000489581 JAKMIP1Q96N16 626 aaKnown RBP19.11■□□□□ 0.65
TOP3B-217ENST00000489581 FDXACB1Q9BRP7 624 aaPredicted RBP19.11■□□□□ 0.65
TOP3B-217ENST00000489581 SLC26A6Q9BXS9 759 aa19.11■□□□□ 0.65
TOP3B-217ENST00000489581 CHST12Q9NRB3 414 aa19.11■□□□□ 0.65
TOP3B-217ENST00000489581 SEPT9Q9UHD8 586 aaPredicted RBP19.11■□□□□ 0.65
TOP3B-217ENST00000489581 DBR1Q9UK59 544 aaKnown RBP19.11■□□□□ 0.65
TOP3B-217ENST00000489581 MYO15AQ9UKN7 3530 aa19.1■□□□□ 0.65
TOP3B-217ENST00000489581 USP11P51784 963 aa19.1■□□□□ 0.65
TOP3B-217ENST00000489581 NUBP1P53384 320 aa19.1■□□□□ 0.65
TOP3B-217ENST00000489581 NTRK3Q16288 839 aa19.1■□□□□ 0.65
TOP3B-217ENST00000489581 ATAT1Q5SQI0 421 aa19.1■□□□□ 0.65
TOP3B-217ENST00000489581 TMEM105Q8N8V8 129 aa19.1■□□□□ 0.65
TOP3B-217ENST00000489581 TDRD5Q8NAT2 981 aaKnown RBP19.1■□□□□ 0.65
TOP3B-217ENST00000489581 CCDC148Q8NFR7 591 aa19.1■□□□□ 0.65
TOP3B-217ENST00000489581 FEZF2Q8TBJ5 459 aa19.1■□□□□ 0.65
TOP3B-217ENST00000489581 IGSF21Q96ID5 467 aa19.1■□□□□ 0.65
TOP3B-217ENST00000489581 CEP89Q96ST8 783 aa19.1■□□□□ 0.65
TOP3B-217ENST00000489581 NRDE2Q9H7Z3 1164 aa19.1■□□□□ 0.65
TOP3B-217ENST00000489581 INPP5FQ9Y2H2 1132 aa19.1■□□□□ 0.65
TOP3B-217ENST00000489581 MEIS3P2A8K0S8 358 aa19.09■□□□□ 0.65
TOP3B-217ENST00000489581 PSMD10O75832 226 aa19.09■□□□□ 0.65
TOP3B-217ENST00000489581 CTSAP10619 480 aa19.09■□□□□ 0.65
TOP3B-217ENST00000489581 DNM2P50570 870 aa19.09■□□□□ 0.65
TOP3B-217ENST00000489581 CDC42EP1Q00587 391 aa19.09■□□□□ 0.65
TOP3B-217ENST00000489581 XKR3Q5GH77 459 aa19.09■□□□□ 0.65
TOP3B-217ENST00000489581 KIAA1841Q6NSI8 718 aa19.09■□□□□ 0.65
TOP3B-217ENST00000489581 BLOC1S2Q6QNY1 142 aa19.09■□□□□ 0.65
TOP3B-217ENST00000489581 DDX53Q86TM3 631 aaKnown RBP19.09■□□□□ 0.65
TOP3B-217ENST00000489581 TBCKQ8TEA7 893 aa19.09■□□□□ 0.65
TOP3B-217ENST00000489581 BCL7CQ8WUZ0 217 aaPredicted RBP19.09■□□□□ 0.65
TOP3B-217ENST00000489581 RNF26Q9BY78 433 aaPredicted RBP19.09■□□□□ 0.65
TOP3B-217ENST00000489581 NIFKQ9BYG3 293 aaKnown RBP19.09■□□□□ 0.65
TOP3B-217ENST00000489581 GBP3Q9H0R5 595 aa19.09■□□□□ 0.65
TOP3B-217ENST00000489581 TBC1D13Q9NVG8 400 aa19.09■□□□□ 0.65
TOP3B-217ENST00000489581 DZANK1Q9NVP4 752 aa19.09■□□□□ 0.65
TOP3B-217ENST00000489581 PIN4Q9Y237 131 aaKnown RBP19.09■□□□□ 0.65
TOP3B-217ENST00000489581 C2orf16Q68DN1 1984 aa19.09■□□□□ 0.65
TOP3B-217ENST00000489581 NID2Q14112 1375 aa19.08■□□□□ 0.65
TOP3B-217ENST00000489581 STBD1O95210 358 aa19.08■□□□□ 0.64
TOP3B-217ENST00000489581 GALTP07902 379 aa19.08■□□□□ 0.64
TOP3B-217ENST00000489581 SFPQP23246 707 aaKnown RBP eCLIP19.08■□□□□ 0.64
TOP3B-217ENST00000489581 NLRP5P59047 1200 aa19.08■□□□□ 0.64
TOP3B-217ENST00000489581 CCT2P78371 535 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms