RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 EIF4HQ15056 248 aaKnown RBP3.72□□□□□ -1.81
CALD1-221ENST00000489019 RALBP1Q15311 655 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 ARHGAP44Q17R89 818 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 RNF151Q2KHN1 245 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 CFAP100Q494V2 611 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 TMEM200BQ69YZ2 307 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 C16orf86Q6ZW13 317 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 BCL6BQ8N143 479 aaPredicted RBP3.72□□□□□ -1.81
CALD1-221ENST00000489019 SYNPOQ8N3V7 929 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 DNERQ8NFT8 737 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 APPBP2Q92624 585 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 LOXL4Q96JB6 756 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 C8orf49Q96NF6 230 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 WWC2-AS2Q96NR7 200 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 GNRHR2Q96P88 292 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 MTFR1LQ9H019 292 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 KIAA1683Q9H0B3 1180 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 CD248Q9HCU0 757 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 JADE2Q9NQC1 790 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 INTS7Q9NVH2 962 aaKnown RBP3.72□□□□□ -1.81
CALD1-221ENST00000489019 H2AFY2Q9P0M6 372 aaPredicted RBP3.72□□□□□ -1.81
CALD1-221ENST00000489019 MAGEC2Q9UBF1 373 aaPredicted RBP3.72□□□□□ -1.81
CALD1-221ENST00000489019 B4GALT6Q9UBX8 382 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 EIF3AQ14152 1382 aaKnown RBP3.72□□□□□ -1.81
CALD1-221ENST00000489019 KTN1Q86UP2 1357 aaKnown RBP3.72□□□□□ -1.81
CALD1-221ENST00000489019 SPHKAPQ2M3C7 1700 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 PLA2R1Q13018 1463 aa3.72□□□□□ -1.81
CALD1-221ENST00000489019 MYBBP1AQ9BQG0 1328 aaKnown RBP3.71□□□□□ -1.81
CALD1-221ENST00000489019 TRPM2O94759 1503 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 LAMC1P11047 1609 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 CEP152O94986 1710 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 PATE3B3GLJ2 98 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 MATN2O00339 956 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 PRLP01236 227 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 HMGCRP04035 888 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 FNTBP49356 437 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 RGS3P49796 1198 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 STAT5BP51692 787 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 IRX6P78412 446 aaPredicted RBP3.71□□□□□ -1.82
CALD1-221ENST00000489019 ZNF827Q17R98 1081 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 DALRD3Q5D0E6 543 aaKnown RBP3.71□□□□□ -1.82
CALD1-221ENST00000489019 CC2D1BQ5T0F9 858 aaKnown RBP3.71□□□□□ -1.82
CALD1-221ENST00000489019 TRIM68Q6AZZ1 485 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 CYB5RLQ6IPT4 315 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 UBE2R2Q712K3 238 aaPredicted RBP3.71□□□□□ -1.82
CALD1-221ENST00000489019 OTOP2Q7RTS6 562 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 GGNQ86UU5 652 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 LRRTM3Q86VH5 581 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 TTC9BQ8N6N2 239 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 KIAA1958Q8N8K9 716 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 NINJ1Q92982 152 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 NEIL1Q96FI4 390 aaPredicted RBP3.71□□□□□ -1.82
CALD1-221ENST00000489019 C16orf92Q96LL3 132 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 LRRC37BQ96QE4 947 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 ORAI3Q9BRQ5 295 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 CABP5Q9NP86 173 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 FBXO10Q9UK96 956 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 ATP10AO60312 1499 aa3.71□□□□□ -1.82
CALD1-221ENST00000489019 ZBED9Q6R2W3 1325 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 WASHC2CQ9Y4E1 1318 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 POGZQ7Z3K3 1410 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 PRDM15P57071 1507 aaPredicted RBP3.7□□□□□ -1.82
CALD1-221ENST00000489019 DEPDC5O75140 1603 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 CLTCL1P53675 1640 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 KIF1BO60333 1816 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 A0A0G2JNJ9 132 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 ZNF891A8MT65 544 aaPredicted RBP3.7□□□□□ -1.82
CALD1-221ENST00000489019 H7C1D1 291 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 FOXS1O43638 330 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 KPNA6O60684 536 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 CDC45O75419 566 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 ATP2A2P16615 1042 aaKnown RBP3.7□□□□□ -1.82
CALD1-221ENST00000489019 ZNF20P17024 532 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 SLC9A1P19634 815 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 POU3F2P20265 443 aaPredicted RBP3.7□□□□□ -1.82
CALD1-221ENST00000489019 APEX1P27695 318 aaKnown RBP3.7□□□□□ -1.82
CALD1-221ENST00000489019 CANXP27824 592 aaKnown RBP3.7□□□□□ -1.82
CALD1-221ENST00000489019 FLT3P36888 993 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 DSG1Q02413 1049 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 PCBP1Q15365 356 aaKnown RBP eCLIP3.7□□□□□ -1.82
CALD1-221ENST00000489019 GRAMD4Q6IC98 578 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 TCTN3Q6NUS6 607 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 ESRP1Q6NXG1 681 aaKnown RBP3.7□□□□□ -1.82
CALD1-221ENST00000489019 GIMAP6Q6P9H5 292 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 FILIP1Q7Z7B0 1213 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 CIR1Q86X95 450 aaPredicted RBP3.7□□□□□ -1.82
CALD1-221ENST00000489019 DHX37Q8IY37 1157 aaKnown RBP3.7□□□□□ -1.82
CALD1-221ENST00000489019 NIM1KQ8IY84 436 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 IFNL2Q8IZJ0 200 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 NXPE1Q8N323 547 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 CFHR4Q92496 578 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 LMF1Q96S06 567 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 ELF4Q99607 663 aaPredicted RBP3.7□□□□□ -1.82
CALD1-221ENST00000489019 FOXB1Q99853 325 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 TARS2Q9BW92 718 aaKnown RBP3.7□□□□□ -1.82
CALD1-221ENST00000489019 C1QTNF3Q9BXJ4 246 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 PCIF1Q9H4Z3 704 aa3.7□□□□□ -1.82
CALD1-221ENST00000489019 PANK3Q9H999 370 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms