RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 ZBBXA8MT70 800 aa16.81■□□□□ 0.28
FDPS-213ENST00000489003 ENPP3O14638 875 aa16.81■□□□□ 0.28
FDPS-213ENST00000489003 GPR182O15218 404 aa16.81■□□□□ 0.28
FDPS-213ENST00000489003 FGFR4P22455 802 aa16.81■□□□□ 0.28
FDPS-213ENST00000489003 POU5F1BQ06416 359 aa16.81■□□□□ 0.28
FDPS-213ENST00000489003 CAPSQ13938 189 aa16.81■□□□□ 0.28
FDPS-213ENST00000489003 RESP18Q5W5W9 173 aa16.81■□□□□ 0.28
FDPS-213ENST00000489003 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.81■□□□□ 0.28
FDPS-213ENST00000489003 PDILTQ8N807 584 aa16.81■□□□□ 0.28
FDPS-213ENST00000489003 RNF149Q8NC42 400 aa16.81■□□□□ 0.28
FDPS-213ENST00000489003 BSNDQ8WZ55 320 aa16.81■□□□□ 0.28
FDPS-213ENST00000489003 SCLT1Q96NL6 688 aa16.81■□□□□ 0.28
FDPS-213ENST00000489003 TMX1Q9H3N1 280 aa16.81■□□□□ 0.28
FDPS-213ENST00000489003 MINDY3Q9H8M7 445 aa16.81■□□□□ 0.28
FDPS-213ENST00000489003 SLC4A7Q9Y6M7 1214 aa16.81■□□□□ 0.28
FDPS-213ENST00000489003 NPHP3-ACAD11A0A0J9YXS1 232 aa16.8■□□□□ 0.28
FDPS-213ENST00000489003 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.8■□□□□ 0.28
FDPS-213ENST00000489003 SFI1A8K8P3 1242 aa16.8■□□□□ 0.28
FDPS-213ENST00000489003 GRXCR1A8MXD5 290 aa16.8■□□□□ 0.28
FDPS-213ENST00000489003 GUCY2CP25092 1073 aa16.8■□□□□ 0.28
FDPS-213ENST00000489003 PTENP60484 403 aa16.8■□□□□ 0.28
FDPS-213ENST00000489003 PAK2Q13177 524 aa16.8■□□□□ 0.28
FDPS-213ENST00000489003 TFDP1Q14186 410 aa16.8■□□□□ 0.28
FDPS-213ENST00000489003 ODR4Q5SWX8 454 aa16.8■□□□□ 0.28
FDPS-213ENST00000489003 IFNLR1Q8IU57 520 aaPredicted RBP16.8■□□□□ 0.28
FDPS-213ENST00000489003 DAW1Q8N136 415 aa16.8■□□□□ 0.28
FDPS-213ENST00000489003 LARP4BQ92615 738 aaKnown RBP16.8■□□□□ 0.28
FDPS-213ENST00000489003 INO80BQ9C086 356 aaPredicted RBP16.8■□□□□ 0.28
FDPS-213ENST00000489003 MTIF3Q9H2K0 278 aaKnown RBP16.8■□□□□ 0.28
FDPS-213ENST00000489003 FAM13BQ9NYF5 915 aa16.8■□□□□ 0.28
FDPS-213ENST00000489003 STK17AQ9UEE5 414 aa16.8■□□□□ 0.28
FDPS-213ENST00000489003 MICAL3Q7RTP6 2002 aa16.8■□□□□ 0.28
FDPS-213ENST00000489003 MYH11P35749 1972 aa16.79■□□□□ 0.28
FDPS-213ENST00000489003 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.79■□□□□ 0.28
FDPS-213ENST00000489003 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.79■□□□□ 0.28
FDPS-213ENST00000489003 EFCAB14O75071 495 aa16.79■□□□□ 0.28
FDPS-213ENST00000489003 HIP1RO75146 1068 aa16.79■□□□□ 0.28
FDPS-213ENST00000489003 CMA1P23946 247 aa16.79■□□□□ 0.28
FDPS-213ENST00000489003 STAT6P42226 847 aa16.79■□□□□ 0.28
FDPS-213ENST00000489003 WDR5P61964 334 aaKnown RBP16.79■□□□□ 0.28
FDPS-213ENST00000489003 RAD51AP2Q09MP3 1159 aa16.79■□□□□ 0.28
FDPS-213ENST00000489003 MAPK7Q13164 816 aa16.79■□□□□ 0.28
FDPS-213ENST00000489003 E2F4Q16254 413 aa16.79■□□□□ 0.28
FDPS-213ENST00000489003 LRIT3Q3SXY7 679 aa16.79■□□□□ 0.28
FDPS-213ENST00000489003 HABP4Q5JVS0 413 aaKnown RBP16.79■□□□□ 0.28
FDPS-213ENST00000489003 SRGAP1Q7Z6B7 1085 aa16.79■□□□□ 0.28
FDPS-213ENST00000489003 GPBP1Q86WP2 473 aa16.79■□□□□ 0.28
FDPS-213ENST00000489003 LINC01599Q8WXQ3 324 aa16.79■□□□□ 0.28
FDPS-213ENST00000489003 KIFAP3Q92845 792 aa16.79■□□□□ 0.28
FDPS-213ENST00000489003 TIPINQ9BVW5 301 aa16.79■□□□□ 0.28
FDPS-213ENST00000489003 KCND2Q9NZV8 630 aa16.79■□□□□ 0.28
FDPS-213ENST00000489003 PTPRSQ13332 1948 aa16.78■□□□□ 0.28
FDPS-213ENST00000489003 MGEA5O60502 916 aa16.78■□□□□ 0.28
FDPS-213ENST00000489003 KCNJ6P48051 423 aa16.78■□□□□ 0.28
FDPS-213ENST00000489003 DEFB103AP81534 67 aa16.78■□□□□ 0.28
FDPS-213ENST00000489003 GIT2Q14161 759 aa16.78■□□□□ 0.28
FDPS-213ENST00000489003 DSC3Q14574 896 aa16.78■□□□□ 0.28
FDPS-213ENST00000489003 FAM109BQ6ICB4 259 aaPredicted RBP16.78■□□□□ 0.28
FDPS-213ENST00000489003 FAM43BQ6ZT52 329 aaPredicted RBP16.78■□□□□ 0.28
FDPS-213ENST00000489003 SV2BQ7L1I2 683 aa16.78■□□□□ 0.28
FDPS-213ENST00000489003 PHOSPHO2Q8TCD6 241 aa16.78■□□□□ 0.28
FDPS-213ENST00000489003 DHX58Q96C10 678 aa16.78■□□□□ 0.28
FDPS-213ENST00000489003 FTHL17Q9BXU8 183 aa16.78■□□□□ 0.28
FDPS-213ENST00000489003 KCNH3Q9ULD8 1083 aa16.78■□□□□ 0.28
FDPS-213ENST00000489003 TRIOBPQ9H2D6 2365 aa16.78■□□□□ 0.28
FDPS-213ENST00000489003 A0A1B0GVL5 298 aa16.77■□□□□ 0.28
FDPS-213ENST00000489003 A0A1W2PQ27 194 aa16.77■□□□□ 0.28
FDPS-213ENST00000489003 A0A1W2PQ64 194 aa16.77■□□□□ 0.28
FDPS-213ENST00000489003 A0A1W2PQD8 194 aa16.77■□□□□ 0.28
FDPS-213ENST00000489003 LRRIQ4A6NIV6 560 aa16.77■□□□□ 0.28
FDPS-213ENST00000489003 POLR2DO15514 142 aaKnown RBP16.77■□□□□ 0.28
FDPS-213ENST00000489003 PHKA2P46019 1235 aa16.77■□□□□ 0.28
FDPS-213ENST00000489003 CACNB1Q02641 598 aaPredicted RBP16.77■□□□□ 0.28
FDPS-213ENST00000489003 TPRNQ4KMQ1 711 aa16.77■□□□□ 0.28
FDPS-213ENST00000489003 CATSPER4Q7RTX7 472 aa16.77■□□□□ 0.28
FDPS-213ENST00000489003 TMCO2Q7Z6W1 182 aaPredicted RBP16.77■□□□□ 0.28
FDPS-213ENST00000489003 IQUBQ8NA54 791 aa16.77■□□□□ 0.28
FDPS-213ENST00000489003 IFT74Q96LB3 600 aa16.77■□□□□ 0.28
FDPS-213ENST00000489003 ADAM2Q99965 735 aa16.77■□□□□ 0.28
FDPS-213ENST00000489003 NFKBIZQ9BYH8 718 aa16.77■□□□□ 0.28
FDPS-213ENST00000489003 HPSEQ9Y251 543 aa16.77■□□□□ 0.28
FDPS-213ENST00000489003 TTC3P53804 2025 aa16.77■□□□□ 0.27
FDPS-213ENST00000489003 FAM237AA0A1B0GTK4 181 aa16.76■□□□□ 0.27
FDPS-213ENST00000489003 MYMKA6NI61 221 aa16.76■□□□□ 0.27
FDPS-213ENST00000489003 AMHP03971 560 aa16.76■□□□□ 0.27
FDPS-213ENST00000489003 KRT18P05783 430 aaKnown RBP16.76■□□□□ 0.27
FDPS-213ENST00000489003 SFPQP23246 707 aaKnown RBP eCLIP16.76■□□□□ 0.27
FDPS-213ENST00000489003 NAMPTP43490 491 aa16.76■□□□□ 0.27
FDPS-213ENST00000489003 PEX3P56589 373 aa16.76■□□□□ 0.27
FDPS-213ENST00000489003 MBTD1Q05BQ5 628 aa16.76■□□□□ 0.27
FDPS-213ENST00000489003 PPP2R5AQ15172 486 aa16.76■□□□□ 0.27
FDPS-213ENST00000489003 STAMQ92783 540 aa16.76■□□□□ 0.27
FDPS-213ENST00000489003 TOP1MTQ969P6 601 aa16.76■□□□□ 0.27
FDPS-213ENST00000489003 DRC1Q96MC2 740 aa16.76■□□□□ 0.27
FDPS-213ENST00000489003 SLC9A7Q96T83 725 aa16.76■□□□□ 0.27
FDPS-213ENST00000489003 REEP2Q9BRK0 252 aa16.76■□□□□ 0.27
FDPS-213ENST00000489003 NTPCRQ9BSD7 190 aaKnown RBP16.76■□□□□ 0.27
FDPS-213ENST00000489003 TSPYL2Q9H2G4 693 aaPredicted RBP16.76■□□□□ 0.27
FDPS-213ENST00000489003 CHST12Q9NRB3 414 aa16.76■□□□□ 0.27
FDPS-213ENST00000489003 RGS18Q9NS28 235 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms