RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 COL6A3P12111 3177 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 A0A1W2PQC6 194 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 SFI1A8K8P3 1242 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 KBTBD13C9JR72 458 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 SOX1O00570 391 aaPredicted RBP13.99□□□□□ -0.17
NELFE-209ENST00000488426 NRDCO43847 1150 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 CALUO43852 315 aaPredicted RBP13.99□□□□□ -0.17
NELFE-209ENST00000488426 GGPS1O95749 300 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 DNM2P50570 870 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 LRMPQ12912 555 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 TRIM60Q495X7 471 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 PLA2G4FQ68DD2 849 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 TAPT1Q6NXT6 567 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 ARMCX5Q6P1M9 558 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 ZNF720Q7Z2F6 126 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 PCDHB13Q9Y5F0 798 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 PRPF6O94906 941 aaKnown RBP13.98□□□□□ -0.17
NELFE-209ENST00000488426 PLS3P13797 630 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 HOXD13P35453 343 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 NPEPPSP55786 919 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 TRIM14Q14142 442 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 ARID5BQ14865 1188 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 KCNA10Q16322 511 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 NFIL3Q16649 462 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 CELF3Q5SZQ8 465 aaKnown RBP13.98□□□□□ -0.17
NELFE-209ENST00000488426 FAM160B1Q5W0V3 765 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 CCDC62Q6P9F0 684 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 FBXO16Q8IX29 292 aaPredicted RBP13.98□□□□□ -0.17
NELFE-209ENST00000488426 CCDC112Q8NEF3 446 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 AFAP1L1Q8TED9 768 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 SCFD2Q8WU76 684 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 SEPT1Q8WYJ6 367 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 CEP170P1Q96L14 293 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 ST6GALNAC4Q9H4F1 302 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 MLXIPQ9HAP2 919 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 VTA1Q9NP79 307 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 RRAGDQ9NQL2 400 aaPredicted RBP13.98□□□□□ -0.17
NELFE-209ENST00000488426 PHF24Q9UPV7 400 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 TELO2Q9Y4R8 837 aa13.98□□□□□ -0.17
NELFE-209ENST00000488426 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.98□□□□□ -0.172e-7■■■■□ 25.7
NELFE-209ENST00000488426 CDH23Q9H251 3354 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 A0A1W2PQ45 241 aaPredicted RBP13.97□□□□□ -0.17
NELFE-209ENST00000488426 GSTTP1A0A1W2PQM5 241 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 A0A1W2PQY0 241 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 TMEM150BA6NC51 233 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 CETN3O15182 167 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 DUSP11O75319 330 aaKnown RBP13.97□□□□□ -0.17
NELFE-209ENST00000488426 PPP1R37O75864 691 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 DGAT1O75907 488 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 ARIH2O95376 493 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 ITGB8P26012 769 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 NMT1P30419 496 aaKnown RBP13.97□□□□□ -0.17
NELFE-209ENST00000488426 MARSP56192 900 aaKnown RBP13.97□□□□□ -0.17
NELFE-209ENST00000488426 BEX3Q00994 111 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 UBXN1Q04323 297 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 TTLL4Q14679 1199 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 MAN2A1Q16706 1144 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 LY6KQ17RY6 165 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 MCPH1Q8NEM0 835 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 KIAA1524Q8TCG1 905 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 KIFAP3Q92845 792 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 NOC4LQ9BVI4 516 aaKnown RBP13.97□□□□□ -0.17
NELFE-209ENST00000488426 STRA6Q9BX79 667 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 C17orf75Q9HAS0 396 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 POLD4Q9HCU8 107 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 CYP26B1Q9NR63 512 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 SEPT9Q9UHD8 586 aaPredicted RBP13.97□□□□□ -0.17
NELFE-209ENST00000488426 TRIM43BA6NCK2 446 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 SORBS3O60504 671 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 OATP04181 439 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 SMPD1P17405 629 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 RPL13P26373 211 aaKnown RBP13.97□□□□□ -0.17
NELFE-209ENST00000488426 CCZ1BP86790 482 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 CCZ1P86791 482 aaPredicted RBP13.97□□□□□ -0.17
NELFE-209ENST00000488426 TLE2Q04725 743 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 SNX17Q15036 470 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 RNF180Q86T96 592 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 PPFIBP1Q86W92 1011 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 GOLGA5Q8TBA6 731 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 TRIM43Q96BQ3 446 aaPredicted RBP13.97□□□□□ -0.17
NELFE-209ENST00000488426 EEF2KMTQ96G04 330 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 PYCARDQ9ULZ3 195 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 GNEQ9Y223 722 aaKnown RBP13.97□□□□□ -0.17
NELFE-209ENST00000488426 PPME1Q9Y570 386 aa13.97□□□□□ -0.17
NELFE-209ENST00000488426 RBM47A0AV96 593 aaKnown RBP13.96□□□□□ -0.17
NELFE-209ENST00000488426 TPM1P09493 284 aa13.96□□□□□ -0.17
NELFE-209ENST00000488426 C6orf222P0C671 652 aaPredicted RBP13.96□□□□□ -0.17
NELFE-209ENST00000488426 SKILP12757 684 aa13.96□□□□□ -0.17
NELFE-209ENST00000488426 NR2F2P24468 414 aa13.96□□□□□ -0.17
NELFE-209ENST00000488426 CLCN1P35523 988 aa13.96□□□□□ -0.17
NELFE-209ENST00000488426 ACLYP53396 1101 aa13.96□□□□□ -0.17
NELFE-209ENST00000488426 ADAM9Q13443 819 aa13.96□□□□□ -0.17
NELFE-209ENST00000488426 MIIPQ5JXC2 388 aa13.96□□□□□ -0.17
NELFE-209ENST00000488426 DHX37Q8IY37 1157 aaKnown RBP13.96□□□□□ -0.17
NELFE-209ENST00000488426 LRCH3Q96II8 777 aa13.96□□□□□ -0.17
NELFE-209ENST00000488426 FAM167AQ96KS9 214 aa13.96□□□□□ -0.17
NELFE-209ENST00000488426 NIFKQ9BYG3 293 aaKnown RBP13.96□□□□□ -0.17
NELFE-209ENST00000488426 PDLIM7Q9NR12 457 aa13.96□□□□□ -0.17
NELFE-209ENST00000488426 ZMYM2Q9UBW7 1377 aa13.96□□□□□ -0.17
NELFE-209ENST00000488426 K7ENM7 598 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms