RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 SUCLA2Q9P2R7 463 aaPredicted RBP12.61□□□□□ -0.39
PCYT1A-215ENST00000488235 PCDHB12Q9Y5F1 795 aa12.61□□□□□ -0.39
PCYT1A-215ENST00000488235 MYO15AQ9UKN7 3530 aa12.61□□□□□ -0.39
PCYT1A-215ENST00000488235 USP34Q70CQ2 3546 aa12.61□□□□□ -0.39
PCYT1A-215ENST00000488235 A0A0U1RQF3 1178 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 HIDE1A8MVS5 230 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 FSCN2O14926 492 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 GPR37L1O60883 481 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 CDKL5O76039 1030 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 EYA4O95677 639 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 ZSCAN20P17040 1043 aaPredicted RBP12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 FOSBP53539 338 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 ANAPC15P60006 121 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 PSMC5P62195 406 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 SMAD4Q13485 552 aaKnown RBP12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 KCNT2Q6UVM3 1135 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 RHPN2Q8IUC4 686 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 THNSL1Q8IYQ7 743 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 SMRP1Q8NCR6 262 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 NSUN7Q8NE18 718 aaKnown RBP12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 HELQQ8TDG4 1101 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 GTF3C6Q969F1 213 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 TLE6Q9H808 572 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 MINDY3Q9H8M7 445 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 IFT122Q9HBG6 1241 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 CYP26B1Q9NR63 512 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 TLR9Q9NR96 1032 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 CD207Q9UJ71 328 aa12.6□□□□□ -0.39
PCYT1A-215ENST00000488235 NT5C1B-RDH14C9J2C7 533 aa12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 B4GALT3O60512 393 aa12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 LAG3P18627 525 aa12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 QARSP47897 775 aaKnown RBP12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 UBE3AQ05086 875 aa12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 KCNC3Q14003 757 aa12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 DUSP6Q16828 381 aa12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 PLPP4Q5VZY2 271 aa12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 TMEM173Q86WV6 379 aaPredicted RBP12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 MICAL1Q8TDZ2 1067 aa12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 TMEM143Q96AN5 459 aa12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 FAM20AQ96MK3 541 aa12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 NLRP4Q96MN2 994 aa12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 GCOM2Q9BZD3 368 aaPredicted RBP12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 AAASQ9NRG9 546 aa12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 PRKAG3Q9UGI9 489 aa12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 CDH22Q9UJ99 828 aa12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 VPS13AQ96RL7 3174 aa12.59□□□□□ -0.39
PCYT1A-215ENST00000488235 P4HBP07237 508 aaKnown RBP12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 PHKA2P46019 1235 aa12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 AFF1P51825 1210 aaKnown RBP12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 PLCB3Q01970 1234 aa12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 CYP4A11Q02928 519 aa12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 COASYQ13057 564 aa12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 CTTNQ14247 550 aaKnown RBP12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 NCAPH2Q6IBW4 605 aa12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 FAM43BQ6ZT52 329 aaPredicted RBP12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 ZNF710Q8N1W2 664 aa12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 LRRC43Q8N309 656 aa12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 BCL7CQ8WUZ0 217 aaPredicted RBP12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 MRPS27Q92552 414 aaKnown RBP12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 DYDC2Q96IM9 177 aa12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 CEP170P1Q96L14 293 aa12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 TCF25Q9BQ70 676 aa12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 LXNQ9BS40 222 aa12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 DHX33Q9H6R0 707 aaKnown RBP12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 MUTYHQ9UIF7 546 aa12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 USP15Q9Y4E8 981 aaPredicted RBP12.58□□□□□ -0.4
PCYT1A-215ENST00000488235 A0A087WWV3 80 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 BTBD18B2RXH4 712 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 DCXO43602 365 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 SLITRK3O94933 977 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 GCFC2P16383 781 aaKnown RBP12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 YWHABP31946 246 aaKnown RBP12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 KRT2P35908 639 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 NEK4P51957 841 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 EPHA7Q15375 998 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 ZNF410Q86VK4 478 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 RNF135Q8IUD6 432 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 C4orf19Q8IY42 314 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 ABI1Q8IZP0 508 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 SLC39A11Q8N1S5 342 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 FEZF2Q8TBJ5 459 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 PRPF31Q8WWY3 499 aaKnown RBP12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 ZNF558Q96NG5 402 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 APOL5Q9BWW9 433 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 XPNPEP1Q9NQW7 623 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 PIN4Q9Y237 131 aaKnown RBP12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 FAM50BQ9Y247 325 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 COL4A3BPQ9Y5P4 624 aa12.57□□□□□ -0.4
PCYT1A-215ENST00000488235 TBX3O15119 743 aa12.56□□□□□ -0.4
PCYT1A-215ENST00000488235 HOXA2O43364 376 aa12.56□□□□□ -0.4
PCYT1A-215ENST00000488235 EOMESO95936 686 aa12.56□□□□□ -0.4
PCYT1A-215ENST00000488235 SRGAP2CP0DJJ0 459 aa12.56□□□□□ -0.4
PCYT1A-215ENST00000488235 XBP1P17861 261 aa12.56□□□□□ -0.4
PCYT1A-215ENST00000488235 HOXA11P31270 313 aaPredicted RBP12.56□□□□□ -0.4
PCYT1A-215ENST00000488235 DNM2P50570 870 aa12.56□□□□□ -0.4
PCYT1A-215ENST00000488235 BCAR1P56945 870 aa12.56□□□□□ -0.4
PCYT1A-215ENST00000488235 LAMTOR4Q0VGL1 99 aa12.56□□□□□ -0.4
PCYT1A-215ENST00000488235 ANKRD1Q15327 319 aa12.56□□□□□ -0.4
PCYT1A-215ENST00000488235 TWF2Q6IBS0 349 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms