RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 JPH2Q9BR39 696 aaPredicted RBP21.65■■□□□ 1.06
CD55-209ENST00000488171 LXNQ9BS40 222 aa21.65■■□□□ 1.06
CD55-209ENST00000488171 RGL1Q9NZL6 768 aa21.65■■□□□ 1.06
CD55-209ENST00000488171 WNT7AO00755 349 aa21.64■■□□□ 1.06
CD55-209ENST00000488171 LAG3P18627 525 aa21.64■■□□□ 1.06
CD55-209ENST00000488171 FOSBP53539 338 aa21.64■■□□□ 1.06
CD55-209ENST00000488171 DIS3L2Q8IYB7 885 aaKnown RBP21.64■■□□□ 1.06
CD55-209ENST00000488171 THNSL1Q8IYQ7 743 aa21.64■■□□□ 1.06
CD55-209ENST00000488171 GJD3Q8N144 294 aa21.64■■□□□ 1.06
CD55-209ENST00000488171 PPP2R3CQ969Q6 453 aa21.64■■□□□ 1.06
CD55-209ENST00000488171 DYDC2Q96IM9 177 aa21.64■■□□□ 1.06
CD55-209ENST00000488171 CEP170P1Q96L14 293 aa21.64■■□□□ 1.06
CD55-209ENST00000488171 C1QTNF1Q9BXJ1 281 aa21.64■■□□□ 1.06
CD55-209ENST00000488171 DHX33Q9H6R0 707 aaKnown RBP21.64■■□□□ 1.06
CD55-209ENST00000488171 CHST12Q9NRB3 414 aa21.64■■□□□ 1.06
CD55-209ENST00000488171 DACT1Q9NYF0 836 aa21.64■■□□□ 1.06
CD55-209ENST00000488171 BAG4O95429 457 aaKnown RBP21.63■■□□□ 1.05
CD55-209ENST00000488171 EOMESO95936 686 aa21.63■■□□□ 1.05
CD55-209ENST00000488171 COL9A1P20849 921 aa21.63■■□□□ 1.05
CD55-209ENST00000488171 SFPQP23246 707 aaKnown RBP eCLIP21.63■■□□□ 1.05
CD55-209ENST00000488171 CLUL1Q15846 466 aa21.63■■□□□ 1.05
CD55-209ENST00000488171 CSPP1Q1MSJ5 1256 aa21.63■■□□□ 1.05
CD55-209ENST00000488171 LRRC43Q8N309 656 aa21.63■■□□□ 1.05
CD55-209ENST00000488171 RNF169Q8NCN4 708 aa21.63■■□□□ 1.05
CD55-209ENST00000488171 SLC7A3Q8WY07 619 aa21.63■■□□□ 1.05
CD55-209ENST00000488171 NLRP4Q96MN2 994 aa21.63■■□□□ 1.05
CD55-209ENST00000488171 IFT122Q9HBG6 1241 aa21.63■■□□□ 1.05
CD55-209ENST00000488171 TLR9Q9NR96 1032 aa21.63■■□□□ 1.05
CD55-209ENST00000488171 FAM50BQ9Y247 325 aa21.63■■□□□ 1.05
CD55-209ENST00000488171 PPME1Q9Y570 386 aa21.63■■□□□ 1.05
CD55-209ENST00000488171 ARID2Q68CP9 1835 aa21.63■■□□□ 1.05
CD55-209ENST00000488171 ZBTB39O15060 712 aa21.62■■□□□ 1.05
CD55-209ENST00000488171 YWHABP31946 246 aaKnown RBP21.62■■□□□ 1.05
CD55-209ENST00000488171 NRIP1P48552 1158 aa21.62■■□□□ 1.05
CD55-209ENST00000488171 ERVFC1P60507 584 aa21.62■■□□□ 1.05
CD55-209ENST00000488171 CYP4A11Q02928 519 aa21.62■■□□□ 1.05
CD55-209ENST00000488171 CTTNQ14247 550 aaKnown RBP21.62■■□□□ 1.05
CD55-209ENST00000488171 RBM23Q86U06 439 aaKnown RBP21.62■■□□□ 1.05
CD55-209ENST00000488171 ABI1Q8IZP0 508 aa21.62■■□□□ 1.05
CD55-209ENST00000488171 EFHBQ8N7U6 833 aa21.62■■□□□ 1.05
CD55-209ENST00000488171 MSLNLQ96KJ4 702 aa21.62■■□□□ 1.05
CD55-209ENST00000488171 TRAIPQ9BWF2 469 aa21.62■■□□□ 1.05
CD55-209ENST00000488171 INO80BQ9C086 356 aaPredicted RBP21.62■■□□□ 1.05
CD55-209ENST00000488171 FSCN2O14926 492 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 MBTPS2O43462 519 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 RFC5P40937 340 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 PHKA2P46019 1235 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 POLGP54098 1239 aaPredicted RBP21.61■■□□□ 1.05
CD55-209ENST00000488171 PLCB3Q01970 1234 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 ZP2Q05996 745 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 KCNT2Q6UVM3 1135 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 HELQQ8TDG4 1101 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 TMEM143Q96AN5 459 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 ZSWIM4Q9H7M6 989 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 CLEC1BQ9P126 229 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 PRKAG3Q9UGI9 489 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 COL4A3BPQ9Y5P4 624 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 PI4K2BG5E9Z4 385 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 SLITRK3O94933 977 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 GLP2RO95838 553 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 CENPBP07199 599 aaPredicted RBP21.61■■□□□ 1.05
CD55-209ENST00000488171 SSTR3P32745 418 aaPredicted RBP21.61■■□□□ 1.05
CD55-209ENST00000488171 PBX3P40426 434 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 NDUFV1P49821 464 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 TRIM29Q14134 588 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 SMAD2Q15796 467 aaKnown RBP21.61■■□□□ 1.05
CD55-209ENST00000488171 CALCRLQ16602 461 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 OTUD6AQ7L8S5 288 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 EXOC8Q8IYI6 725 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 MICAL1Q8TDZ2 1067 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 PRPF31Q8WWY3 499 aaKnown RBP21.61■■□□□ 1.05
CD55-209ENST00000488171 MRPS27Q92552 414 aaKnown RBP21.61■■□□□ 1.05
CD55-209ENST00000488171 EIF2AK1Q9BQI3 630 aaKnown RBP21.61■■□□□ 1.05
CD55-209ENST00000488171 BMP2KQ9NSY1 1161 aaPredicted RBP21.61■■□□□ 1.05
CD55-209ENST00000488171 CD207Q9UJ71 328 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 PCDHA12Q9UN75 941 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 LIMCH1Q9UPQ0 1083 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 PIN4Q9Y237 131 aaKnown RBP21.61■■□□□ 1.05
CD55-209ENST00000488171 LZTS1Q9Y250 596 aa21.61■■□□□ 1.05
CD55-209ENST00000488171 SMAD4Q13485 552 aaKnown RBP21.6■■□□□ 1.05
CD55-209ENST00000488171 EMC2Q15006 297 aa21.6■■□□□ 1.05
CD55-209ENST00000488171 XKR9Q5GH70 373 aa21.6■■□□□ 1.05
CD55-209ENST00000488171 TWF2Q6IBS0 349 aaKnown RBP21.6■■□□□ 1.05
CD55-209ENST00000488171 CATSPER4Q7RTX7 472 aa21.6■■□□□ 1.05
CD55-209ENST00000488171 TPH2Q8IWU9 490 aa21.6■■□□□ 1.05
CD55-209ENST00000488171 ADHFE1Q8IWW8 467 aa21.6■■□□□ 1.05
CD55-209ENST00000488171 PSPC1Q8WXF1 523 aaKnown RBP21.6■■□□□ 1.05
CD55-209ENST00000488171 ZNF558Q96NG5 402 aa21.6■■□□□ 1.05
CD55-209ENST00000488171 MTMR9Q96QG7 549 aa21.6■■□□□ 1.05
CD55-209ENST00000488171 HSD17B14Q9BPX1 270 aa21.6■■□□□ 1.05
CD55-209ENST00000488171 TLE6Q9H808 572 aa21.6■■□□□ 1.05
CD55-209ENST00000488171 RAPGEFL1Q9UHV5 662 aa21.6■■□□□ 1.05
CD55-209ENST00000488171 C19orf67A6NJJ6 358 aa21.59■■□□□ 1.05
CD55-209ENST00000488171 PER2O15055 1255 aa21.59■■□□□ 1.05
CD55-209ENST00000488171 NEMFO60524 1076 aa21.59■■□□□ 1.05
CD55-209ENST00000488171 LAMTOR4Q0VGL1 99 aa21.59■■□□□ 1.05
CD55-209ENST00000488171 PDE12Q6L8Q7 609 aaKnown RBP21.59■■□□□ 1.05
CD55-209ENST00000488171 CCDC83Q8IWF9 413 aa21.59■■□□□ 1.05
CD55-209ENST00000488171 LPPQ93052 612 aa21.59■■□□□ 1.05
CD55-209ENST00000488171 KIF2CQ99661 725 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms