RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 BAG4O95429 457 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 P4HBP07237 508 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 NDUFV1P49821 464 aa12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 EPHA7Q15375 998 aa12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 CLLU1OSQ5K130 101 aa12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 LRRC55Q6ZSA7 311 aa12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 CCDC83Q8IWF9 413 aa12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 DIS3L2Q8IYB7 885 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 GJD3Q8N144 294 aa12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 HELQQ8TDG4 1101 aa12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 TNFRSF25Q93038 417 aa12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 TMEM143Q96AN5 459 aa12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 CASD1Q96PB1 797 aa12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 NAP1L4Q99733 375 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 LXNQ9BS40 222 aa12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 TMEM117Q9H0C3 514 aa12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 ELAC1Q9H777 363 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 CYP26B1Q9NR63 512 aa12.66□□□□□ -0.38
NIPAL3-207ENST00000488155 A0A087WWV3 80 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 FAM86C2PA6NEL3 165 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 TBX3O15119 743 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 NCK2O43639 380 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 SRGAP2CP0DJJ0 459 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 POLGP54098 1239 aaPredicted RBP12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 ERVFC1P60507 584 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 RBM10P98175 930 aaKnown RBP12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 ADAM15Q13444 863 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 TRIM29Q14134 588 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 COL19A1Q14993 1142 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 CALCRLQ16602 461 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 CTC1Q2NKJ3 1217 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 XKR9Q5GH70 373 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 PLPP4Q5VZY2 271 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 TWF2Q6IBS0 349 aaKnown RBP12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 CATSPER4Q7RTX7 472 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 TPH2Q8IWU9 490 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 ZNF710Q8N1W2 664 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 LPPQ93052 612 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 PPP2R3CQ969Q6 453 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 TLE6Q9H808 572 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 TLR9Q9NR96 1032 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 DACT1Q9NYF0 836 aa12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 PIN4Q9Y237 131 aaKnown RBP12.65□□□□□ -0.38
NIPAL3-207ENST00000488155 A0A0U1RQF3 1178 aa12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 NT5C1B-RDH14C9J2C7 533 aa12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 HOXA2O43364 376 aa12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 DKC1O60832 514 aaKnown RBP eCLIP12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 ATF7P17544 494 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 LAG3P18627 525 aa12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 SFPQP23246 707 aaKnown RBP eCLIP12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 YWHABP31946 246 aaKnown RBP12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 TXKP42681 527 aa12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 PUS10Q3MIT2 529 aaKnown RBP12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 KCNT2Q6UVM3 1135 aa12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 ZNF598Q86UK7 904 aaKnown RBP12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 SLFN12Q8IYM2 578 aa12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 SLC7A3Q8WY07 619 aa12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 JPH2Q9BR39 696 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 CD207Q9UJ71 328 aa12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 BARX2Q9UMQ3 279 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 INPP5FQ9Y2H2 1132 aa12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 COL4A3BPQ9Y5P4 624 aa12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 DOCK6Q96HP0 2047 aa12.64□□□□□ -0.39
NIPAL3-207ENST00000488155 MEIS3P2A8K0S8 358 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 MBTPS2O43462 519 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 EIF5BO60841 1220 aaKnown RBP12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 SLITRK3O94933 977 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 GLP2RO95838 553 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 CA8P35219 290 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 CDC42EP1Q00587 391 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 SPIRE1Q08AE8 756 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 EMC2Q15006 297 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 FAM43BQ6ZT52 329 aaPredicted RBP12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 ZNF410Q86VK4 478 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 C4orf19Q8IY42 314 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 LRRC43Q8N309 656 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 PRPF31Q8WWY3 499 aaKnown RBP12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 ZNF558Q96NG5 402 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 EIF2AK1Q9BQI3 630 aaKnown RBP12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 C1QTNF1Q9BXJ1 281 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 INO80BQ9C086 356 aaPredicted RBP12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 TMEM60Q9H2L4 133 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 DHX33Q9H6R0 707 aaKnown RBP12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 ZSWIM4Q9H7M6 989 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 TTC12Q9H892 705 aaPredicted RBP12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 MINDY3Q9H8M7 445 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 IFT122Q9HBG6 1241 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 ENTPD7Q9NQZ7 604 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 PCDHA12Q9UN75 941 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 LIMCH1Q9UPQ0 1083 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 FAM50BQ9Y247 325 aa12.63□□□□□ -0.39
NIPAL3-207ENST00000488155 TECTAO75443 2155 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 NEMFO60524 1076 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 EOMESO95936 686 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 MCM7P33993 719 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 PHKA2P46019 1235 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 UBE3AQ05086 875 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 ZP2Q05996 745 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 LAMTOR4Q0VGL1 99 aa12.62□□□□□ -0.39
NIPAL3-207ENST00000488155 LLGL2Q6P1M3 1020 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms