RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 NOD1Q9Y239 953 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 TCHHQ07283 1943 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 KIAA1217Q5T5P2 1943 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 BICDL2A1A5D9 508 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 M0QZ92 97 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 ARVCFO00192 962 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 ADAM17P78536 824 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 RAD51AP2Q09MP3 1159 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 MAPK7Q13164 816 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 FAM47CQ5HY64 1035 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 MARCH8Q5T0T0 291 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 C1orf53Q5VUE5 145 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 MAEAQ7L5Y9 396 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 ZNF720Q7Z2F6 126 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 ZBTB8OSQ8IWT0 167 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 MYOCDQ8IZQ8 938 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 DAW1Q8N136 415 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 SLC43A3Q8NBI5 491 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 PRPF31Q8WWY3 499 aaKnown RBP12.18□□□□□ -0.46
HDLBP-242ENST00000488013 TMEM143Q96AN5 459 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 SH2D3AQ9BRG2 576 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 INO80BQ9C086 356 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-242ENST00000488013 TSPY26PQ9H489 355 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 KMT5AQ9NQR1 393 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 PCDH10Q9P2E7 1040 aa12.18□□□□□ -0.46
HDLBP-242ENST00000488013 CGNQ9P2M7 1197 aaKnown RBP12.18□□□□□ -0.46
HDLBP-242ENST00000488013 NPHP3-ACAD11A0A0J9YXS1 232 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 CCDC169A6NNP5 214 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 BIN1O00499 593 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 GCNT3O95395 438 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 MYCP01106 439 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-242ENST00000488013 CYP2C9P11712 490 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 CASP1P29466 404 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 PHKA2P46019 1235 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 NPTX2P47972 431 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 NCKAP1LP55160 1127 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 PEX3P56589 373 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 NCBP1Q09161 790 aaKnown RBP12.17□□□□□ -0.46
HDLBP-242ENST00000488013 LAMTOR4Q0VGL1 99 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 STRN3Q13033 797 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 PTK7Q13308 1070 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 PTGISQ16647 500 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 BMT2Q1RMZ1 405 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 SERINC5Q86VE9 423 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 SFR1Q86XK3 245 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 KIAA0319LQ8IZA0 1049 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 CCDC155Q8N6L0 562 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 LINC01465Q8N7H1 131 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 BPIFA3Q9BQP9 254 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 TMEM134Q9H6X4 195 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 AKT3Q9Y243 479 aa12.17□□□□□ -0.46
HDLBP-242ENST00000488013 SFI1A8K8P3 1242 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 SMTNL1A8MU46 457 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 RSPH10B2B2RC85 870 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 K7ENM7 598 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 TLR3O15455 904 aaKnown RBP12.16□□□□□ -0.46
HDLBP-242ENST00000488013 GABBR2O75899 941 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 FGFR1OPO95684 399 aaKnown RBP12.16□□□□□ -0.46
HDLBP-242ENST00000488013 RSPH10BP0C881 870 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 GLRA2P23416 452 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 TPM4P67936 248 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 IRX5P78411 483 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-242ENST00000488013 GTF2BQ00403 316 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 LRRC63Q05C16 580 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 STK4Q13043 487 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 HS2ST1Q7LGA3 356 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 HAUS6Q7Z4H7 955 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 SRGAP1Q7Z6B7 1085 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 RHPN2Q8IUC4 686 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 ADSSL1Q8N142 457 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 LRRC71Q8N4P6 559 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 ZNF507Q8TCN5 953 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 TRAPPC12Q8WVT3 735 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 ERCC4Q92889 916 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-242ENST00000488013 SCLT1Q96NL6 688 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 TOX2Q96NM4 488 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 ACCSQ96QU6 501 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 TSG101Q99816 390 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 FUCA2Q9BTY2 467 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 GCOM2Q9BZD3 368 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-242ENST00000488013 SLC39A2Q9NP94 309 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 GPRC5CQ9NQ84 441 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 ARHGAP28Q9P2N2 729 aa12.16□□□□□ -0.46
HDLBP-242ENST00000488013 LRRIQ4A6NIV6 560 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 K7ERI5 159 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 TREHO43280 583 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 PYGBP11216 843 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 PRKCSHP14314 528 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-242ENST00000488013 RPL13P26373 211 aaKnown RBP12.15□□□□□ -0.46
HDLBP-242ENST00000488013 ZNF165P49910 485 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 CDK7P50613 346 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 CLCN3P51790 818 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 CLCN6P51797 869 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 PTENP60484 403 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 PAK1Q13153 545 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 BFSP2Q13515 415 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 MYBPC2Q14324 1141 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 MAPK6Q16659 721 aa12.15□□□□□ -0.46
HDLBP-242ENST00000488013 KNOP1Q1ED39 458 aaKnown RBP12.15□□□□□ -0.46
HDLBP-242ENST00000488013 DPCR1Q3MIW9 517 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms