RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 ST8SIA6P61647 398 aa16.35■□□□□ 0.21
PKD1-220ENST00000487932 ZNF235Q14590 738 aa16.35■□□□□ 0.21
PKD1-220ENST00000487932 C11orf96Q7Z7L8 435 aa16.35■□□□□ 0.21
PKD1-220ENST00000487932 RNF25Q96BH1 459 aaPredicted RBP16.35■□□□□ 0.21
PKD1-220ENST00000487932 CENPKQ9BS16 269 aa16.35■□□□□ 0.21
PKD1-220ENST00000487932 RUBCNLQ9H714 662 aa16.35■□□□□ 0.21
PKD1-220ENST00000487932 A8MXQ7 604 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 CYBBP04839 570 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 CTSHP09668 335 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 IL6STP40189 918 aaPredicted RBP16.34■□□□□ 0.21
PKD1-220ENST00000487932 PMS1P54277 932 aaKnown RBP16.34■□□□□ 0.21
PKD1-220ENST00000487932 KCTD17Q8N5Z5 321 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 GIMAP8Q8ND71 665 aaPredicted RBP16.34■□□□□ 0.21
PKD1-220ENST00000487932 CNOT8Q9UFF9 292 aaKnown RBP16.34■□□□□ 0.21
PKD1-220ENST00000487932 RSPH10B2B2RC85 870 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 RSPH10BP0C881 870 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 MORF4L2Q15014 288 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 EFTUD2Q15029 972 aaKnown RBP eCLIP16.34■□□□□ 0.218e-10■■■■□ 24.7
PKD1-220ENST00000487932 COBLL1Q53SF7 1204 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 SYCP2LQ5T4T6 812 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 SLC13A1Q9BZW2 595 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 CACNA2D2Q9NY47 1150 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 MAP3K20Q9NYL2 800 aaKnown RBP16.34■□□□□ 0.21
PKD1-220ENST00000487932 SCOCQ9UIL1 159 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 DNAJC12Q9UKB3 198 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 APOBEC2Q9Y235 224 aaKnown RBP16.34■□□□□ 0.21
PKD1-220ENST00000487932 DIAPH2O60879 1101 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 MMP1P03956 469 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 ASNSP08243 561 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 SLFN14P0C7P3 912 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 GRAPQ13588 217 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 DPCR1Q3MIW9 517 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 GRAPLQ8TC17 118 aaPredicted RBP16.34■□□□□ 0.21
PKD1-220ENST00000487932 RGL1Q9NZL6 768 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 DBNLQ9UJU6 430 aaKnown RBP16.34■□□□□ 0.21
PKD1-220ENST00000487932 CDC23Q9UJX2 597 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 PCDHB6Q9Y5E3 794 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 TADA3O75528 432 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 FGGP02679 453 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 PYGBP11216 843 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 FCER1AP12319 257 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 MFN1Q8IWA4 741 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 DYDC2Q96IM9 177 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 TRAF3IP3Q9Y228 551 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 ETF1P62495 437 aaKnown RBP16.34■□□□□ 0.21
PKD1-220ENST00000487932 ZMYM1Q5SVZ6 1142 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 MB21D1Q8N884 522 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 SYT2Q8N9I0 419 aaPredicted RBP16.34■□□□□ 0.21
PKD1-220ENST00000487932 CEP70Q8NHQ1 597 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 KIF12Q96FN5 646 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 LRRC37BQ96QE4 947 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 CPVLQ9H3G5 476 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 SNX5Q9Y5X3 404 aa16.34■□□□□ 0.21
PKD1-220ENST00000487932 KIAA0232Q92628 1395 aa16.33■□□□□ 0.21
PKD1-220ENST00000487932 ATP9BO43861 1147 aa16.33■□□□□ 0.21
PKD1-220ENST00000487932 NPM3O75607 178 aaKnown RBP16.33■□□□□ 0.21
PKD1-220ENST00000487932 MAP4P27816 1152 aaKnown RBP16.33■□□□□ 0.21
PKD1-220ENST00000487932 GPSM2P81274 684 aa16.33■□□□□ 0.21
PKD1-220ENST00000487932 MFSD4BQ5TF39 518 aa16.33■□□□□ 0.21
PKD1-220ENST00000487932 FBXO18Q8NFZ0 1043 aa16.33■□□□□ 0.21
PKD1-220ENST00000487932 PCDHGB4Q9UN71 923 aa16.33■□□□□ 0.21
PKD1-220ENST00000487932 SPAG7O75391 227 aa16.33■□□□□ 0.21
PKD1-220ENST00000487932 ALDH1A1P00352 501 aa16.33■□□□□ 0.21
PKD1-220ENST00000487932 ARL4CP56559 192 aa16.33■□□□□ 0.21
PKD1-220ENST00000487932 GCOM2Q9BZD3 368 aaPredicted RBP16.33■□□□□ 0.21
PKD1-220ENST00000487932 DHX35Q9H5Z1 703 aaKnown RBP16.33■□□□□ 0.21
PKD1-220ENST00000487932 MLH3Q9UHC1 1453 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 PKP1Q13835 747 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 FASTKD1Q53R41 847 aaKnown RBP16.33■□□□□ 0.2
PKD1-220ENST00000487932 GABBR1Q9UBS5 961 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.33■□□□□ 0.2
PKD1-220ENST00000487932 PLEKHA8P1O95397 391 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 KRT72Q14CN4 511 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 SPDYAQ5MJ70 313 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 C16orf87Q6PH81 154 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 SPATA2LQ8IUW3 424 aaPredicted RBP16.33■□□□□ 0.2
PKD1-220ENST00000487932 ZSWIM5Q9P217 1185 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 PRR23AA6NEV1 266 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 KPNA7A9QM74 516 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 MAPK13O15264 365 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 PJA2O43164 708 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 PRELPP51888 382 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 SKOR1P84550 965 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 SLC39A14Q15043 492 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 TMEM179Q6ZVK1 233 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 NEK9Q8TD19 979 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 C11orf70Q9BRQ4 267 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 RWDD2AQ9UIY3 292 aa16.33■□□□□ 0.2
PKD1-220ENST00000487932 TNPO2O14787 897 aaKnown RBP16.32■□□□□ 0.2
PKD1-220ENST00000487932 KRT37O76014 449 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 AKT1P31749 480 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 NUGGCQ68CJ6 796 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 OR6J1Q8NGC5 347 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 FAM167AQ96KS9 214 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 TUBB6Q9BUF5 446 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 POLR3FQ9H1D9 316 aaPredicted RBP16.32■□□□□ 0.2
PKD1-220ENST00000487932 MLXIPLQ9NP71 852 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 RAPGEF6Q8TEU7 1601 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 UBXN8O00124 270 aa16.32■□□□□ 0.2
PKD1-220ENST00000487932 CYP2D6P10635 497 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms