RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 MAFO75444 373 aaPredicted RBP13.7□□□□□ -0.22
VPS16-208ENST00000487461 CTDNEP1O95476 244 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 DNM2P50570 870 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 KCNC3Q14003 757 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 PLPP4Q5VZY2 271 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 PLA2G4FQ68DD2 849 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 RHPN2Q8IUC4 686 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 KSR1Q8IVT5 923 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 LRRC43Q8N309 656 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 ZNF579Q8NAF0 562 aaKnown RBP13.7□□□□□ -0.22
VPS16-208ENST00000487461 HELQQ8TDG4 1101 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 OXER1Q8TDS5 423 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 FAM20AQ96MK3 541 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 ZNF558Q96NG5 402 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 CDCA3Q99618 268 aaPredicted RBP13.7□□□□□ -0.22
VPS16-208ENST00000487461 TCF25Q9BQ70 676 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 KCNMB3Q9NPA1 279 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 DACT1Q9NYF0 836 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 SPG21Q9NZD8 308 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 VAV3Q9UKW4 847 aa13.7□□□□□ -0.22
VPS16-208ENST00000487461 USP15Q9Y4E8 981 aaPredicted RBP13.7□□□□□ -0.22
VPS16-208ENST00000487461 CCDC194A0A1B0GVG4 234 aa13.69□□□□□ -0.22
VPS16-208ENST00000487461 HIDE1A8MVS5 230 aa13.69□□□□□ -0.22
VPS16-208ENST00000487461 CDKL5O76039 1030 aa13.69□□□□□ -0.22
VPS16-208ENST00000487461 QARSP47897 775 aaKnown RBP13.69□□□□□ -0.22
VPS16-208ENST00000487461 NPEPPSP55786 919 aa13.69□□□□□ -0.22
VPS16-208ENST00000487461 KRT17Q04695 432 aa13.69□□□□□ -0.22
VPS16-208ENST00000487461 PPP2R5CQ13362 524 aa13.69□□□□□ -0.22
VPS16-208ENST00000487461 HERC4Q5GLZ8 1057 aaPredicted RBP13.69□□□□□ -0.22
VPS16-208ENST00000487461 EARS2Q5JPH6 523 aaKnown RBP13.69□□□□□ -0.22
VPS16-208ENST00000487461 PPP4R3AQ6IN85 833 aa13.69□□□□□ -0.22
VPS16-208ENST00000487461 TMEM184AQ6ZMB5 413 aa13.69□□□□□ -0.22
VPS16-208ENST00000487461 NEK8Q86SG6 692 aa13.69□□□□□ -0.22
VPS16-208ENST00000487461 ZNF410Q86VK4 478 aa13.69□□□□□ -0.22
VPS16-208ENST00000487461 HAS1Q92839 578 aa13.69□□□□□ -0.22
VPS16-208ENST00000487461 S1PR5Q9H228 398 aa13.69□□□□□ -0.22
VPS16-208ENST00000487461 ENTPD7Q9NQZ7 604 aa13.69□□□□□ -0.22
VPS16-208ENST00000487461 CYP26B1Q9NR63 512 aa13.69□□□□□ -0.22
VPS16-208ENST00000487461 WRAP73Q9P2S5 460 aaPredicted RBP13.69□□□□□ -0.22
VPS16-208ENST00000487461 C5orf42Q9H799 3197 aa13.68□□□□□ -0.22
VPS16-208ENST00000487461 LOC730098B7Z3J9 87 aa13.68□□□□□ -0.22
VPS16-208ENST00000487461 NT5C1B-RDH14C9J2C7 533 aa13.68□□□□□ -0.22
VPS16-208ENST00000487461 CCNT1O60563 726 aaKnown RBP13.68□□□□□ -0.22
VPS16-208ENST00000487461 CENPBP07199 599 aaPredicted RBP13.68□□□□□ -0.22
VPS16-208ENST00000487461 PHKA2P46019 1235 aa13.68□□□□□ -0.22
VPS16-208ENST00000487461 LONRF3Q496Y0 759 aa13.68□□□□□ -0.22
VPS16-208ENST00000487461 PIK3AP1Q6ZUJ8 805 aa13.68□□□□□ -0.22
VPS16-208ENST00000487461 SLC39A11Q8N1S5 342 aa13.68□□□□□ -0.22
VPS16-208ENST00000487461 SUSD6Q92537 303 aa13.68□□□□□ -0.22
VPS16-208ENST00000487461 LPPQ93052 612 aa13.68□□□□□ -0.22
VPS16-208ENST00000487461 TRAIPQ9BWF2 469 aa13.68□□□□□ -0.22
VPS16-208ENST00000487461 NGRNQ9NPE2 291 aaKnown RBP13.68□□□□□ -0.22
VPS16-208ENST00000487461 STK36Q9NRP7 1315 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 P4HBP07237 508 aaKnown RBP13.67□□□□□ -0.22
VPS16-208ENST00000487461 FDPSP14324 419 aaKnown RBP13.67□□□□□ -0.22
VPS16-208ENST00000487461 GCFC2P16383 781 aaKnown RBP13.67□□□□□ -0.22
VPS16-208ENST00000487461 XBP1P17861 261 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 SFPQP23246 707 aaKnown RBP eCLIP13.67□□□□□ -0.22
VPS16-208ENST00000487461 PPM1AP35813 382 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 TECP42680 631 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 AK2P54819 239 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 BCAR1P56945 870 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 CBX2Q14781 532 aaPredicted RBP13.67□□□□□ -0.22
VPS16-208ENST00000487461 EPHA7Q15375 998 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 TWF2Q6IBS0 349 aaKnown RBP13.67□□□□□ -0.22
VPS16-208ENST00000487461 ANKRD54Q6NXT1 300 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 LLGL2Q6P1M3 1020 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 SYCE2Q6PIF2 218 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 HFE2Q6ZVN8 426 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 TMC7Q7Z402 723 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 MRPL43Q8N983 215 aaKnown RBP13.67□□□□□ -0.22
VPS16-208ENST00000487461 CEP170P1Q96L14 293 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 NLRP4Q96MN2 994 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 JPH2Q9BR39 696 aaPredicted RBP13.67□□□□□ -0.22
VPS16-208ENST00000487461 PHF7Q9BWX1 381 aaPredicted RBP13.67□□□□□ -0.22
VPS16-208ENST00000487461 INO80BQ9C086 356 aaPredicted RBP13.67□□□□□ -0.22
VPS16-208ENST00000487461 IFT122Q9HBG6 1241 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 RGL1Q9NZL6 768 aa13.67□□□□□ -0.22
VPS16-208ENST00000487461 ORC3Q9UBD5 711 aaPredicted RBP13.67□□□□□ -0.22
VPS16-208ENST00000487461 PIN4Q9Y237 131 aaKnown RBP13.67□□□□□ -0.22
VPS16-208ENST00000487461 FSD2A1L4K1 749 aa13.66□□□□□ -0.22
VPS16-208ENST00000487461 FAM205CA6NFA0 338 aa13.66□□□□□ -0.22
VPS16-208ENST00000487461 C2orf71A6NGG8 1288 aa13.66□□□□□ -0.22
VPS16-208ENST00000487461 MEIS3P2A8K0S8 358 aa13.66□□□□□ -0.22
VPS16-208ENST00000487461 ZBTB39O15060 712 aa13.66□□□□□ -0.22
VPS16-208ENST00000487461 TBX3O15119 743 aa13.66□□□□□ -0.22
VPS16-208ENST00000487461 DKC1O60832 514 aaKnown RBP eCLIP13.66□□□□□ -0.22
VPS16-208ENST00000487461 ZNF623O75123 536 aa13.66□□□□□ -0.22
VPS16-208ENST00000487461 ALDH7A1P49419 539 aaKnown RBP13.66□□□□□ -0.22
VPS16-208ENST00000487461 CATSPER4Q7RTX7 472 aa13.66□□□□□ -0.22
VPS16-208ENST00000487461 POTEDQ86YR6 584 aa13.66□□□□□ -0.22
VPS16-208ENST00000487461 C4orf19Q8IY42 314 aa13.66□□□□□ -0.22
VPS16-208ENST00000487461 NECAB1Q8N987 351 aa13.66□□□□□ -0.22
VPS16-208ENST00000487461 PRPF31Q8WWY3 499 aaKnown RBP13.66□□□□□ -0.22
VPS16-208ENST00000487461 EDAQ92838 391 aa13.66□□□□□ -0.22
VPS16-208ENST00000487461 TMEM143Q96AN5 459 aa13.66□□□□□ -0.22
VPS16-208ENST00000487461 RPGRIP1Q96KN7 1286 aa13.66□□□□□ -0.22
VPS16-208ENST00000487461 APOL5Q9BWW9 433 aa13.66□□□□□ -0.22
VPS16-208ENST00000487461 DHX33Q9H6R0 707 aaKnown RBP13.66□□□□□ -0.22
VPS16-208ENST00000487461 FAM105AQ9NUU6 356 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms