RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 POLLQ9UGP5 575 aa13.21□□□□□ -0.29
COL3A1-206ENST00000487010 RASAL2Q9UJF2 1139 aa13.21□□□□□ -0.29
COL3A1-206ENST00000487010 SNX24Q9Y343 169 aa13.21□□□□□ -0.29
COL3A1-206ENST00000487010 ANKRD62A6NC57 917 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 SFI1A8K8P3 1242 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 FAM86B1E9PN63 330 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 EIF3DO15371 548 aaKnown RBP eCLIP13.2□□□□□ -0.3
COL3A1-206ENST00000487010 FAM86B2P0C5J1 330 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 VCAM1P19320 739 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 TNFAIP3P21580 790 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 PTGIRP43119 386 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 GTF2IP78347 998 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 CYP4A11Q02928 519 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 ITIH4Q14624 930 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 CHADLQ6NUI6 762 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 ANKS4BQ8N8V4 417 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 TBC1D16Q8TBP0 767 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 FBXO25Q8TCJ0 367 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 ALG3Q92685 438 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 SELENOSQ9BQE4 189 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 POLR3CQ9BUI4 534 aaPredicted RBP13.2□□□□□ -0.3
COL3A1-206ENST00000487010 THAP2Q9H0W7 228 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 IKZF4Q9H2S9 585 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 AZI2Q9H6S1 392 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 TAS2R14Q9NYV8 317 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 CNOT7Q9UIV1 285 aaKnown RBP13.2□□□□□ -0.3
COL3A1-206ENST00000487010 VAV3Q9UKW4 847 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 RABGAP1Q9Y3P9 1069 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 BTAF1O14981 1849 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 FRMPD4Q14CM0 1322 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 TLDC2A0PJX2 215 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 POLD1P28340 1107 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 SLC29A2Q14542 456 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 TRAPPC3LQ5T215 181 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 C6orf118Q5T5N4 469 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 RINT1Q6NUQ1 792 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 CEP57Q86XR8 500 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 COL23A1Q86Y22 540 aaPredicted RBP13.2□□□□□ -0.3
COL3A1-206ENST00000487010 FMNL3Q8IVF7 1028 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 SCLT1Q96NL6 688 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 MKNK1Q9BUB5 465 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 GRHL1Q9NZI5 618 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 COG5Q9UP83 839 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 RPTORQ8N122 1335 aa13.2□□□□□ -0.3
COL3A1-206ENST00000487010 OPLAHO14841 1288 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 MSH4O15457 936 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 RGS16O15492 202 aaPredicted RBP13.19□□□□□ -0.3
COL3A1-206ENST00000487010 PHF2O75151 1096 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 AGTP01019 485 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 GSTA1P08263 222 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 NMT1P30419 496 aaKnown RBP13.19□□□□□ -0.3
COL3A1-206ENST00000487010 NF2P35240 595 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 SREBF1P36956 1147 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 HADHBP55084 474 aaKnown RBP13.19□□□□□ -0.3
COL3A1-206ENST00000487010 ELF3P78545 371 aaPredicted RBP13.19□□□□□ -0.3
COL3A1-206ENST00000487010 IFI35P80217 286 aaPredicted RBP13.19□□□□□ -0.3
COL3A1-206ENST00000487010 ADCY2Q08462 1091 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 CBWD6Q4V339 395 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 CBWD3Q5JTY5 395 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 CBWD5Q5RIA9 395 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 PRR5LQ6MZQ0 368 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 CROCCP2Q86T23 111 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 DCAF4Q8WV16 495 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 C18orf8Q96DM3 657 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 EIF2AK1Q9BQI3 630 aaKnown RBP13.19□□□□□ -0.3
COL3A1-206ENST00000487010 TMEM109Q9BVC6 243 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 INTS2Q9H0H0 1204 aaKnown RBP13.19□□□□□ -0.3
COL3A1-206ENST00000487010 CCDC134Q9H6E4 229 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 USP40Q9NVE5 1235 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.19□□□□□ -0.3
COL3A1-206ENST00000487010 TMOD4Q9NZQ9 345 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 ODF2LQ9ULJ1 636 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 TRPC6Q9Y210 931 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 ALG6Q9Y672 507 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 RAD21O60216 631 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 FAM13AO94988 1023 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 KRT13P13646 458 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 HSPA6P17066 643 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 CHRNA3P32297 505 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 SLC8A1P32418 973 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 ELF1P32519 619 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 RPL21P46778 160 aaKnown RBP13.19□□□□□ -0.3
COL3A1-206ENST00000487010 KIF22Q14807 665 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 SLC15A2Q16348 729 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 NBPF9Q3BBW0 867 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 CRY2Q49AN0 593 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 ZC2HC1CQ53FD0 456 aaPredicted RBP13.19□□□□□ -0.3
COL3A1-206ENST00000487010 MSL1Q68DK7 614 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 AADACL2Q6P093 401 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 LRRC34Q8IZ02 419 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 MYCT1Q8N699 235 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 CERKQ8TCT0 537 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 RBM17Q96I25 401 aaKnown RBP13.19□□□□□ -0.3
COL3A1-206ENST00000487010 SEMA4AQ9H3S1 761 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 INTS9Q9NV88 658 aaKnown RBP13.19□□□□□ -0.3
COL3A1-206ENST00000487010 RGL1Q9NZL6 768 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 APEX2Q9UBZ4 518 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 SLC12A4Q9UP95 1085 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 SYNGAP1Q96PV0 1343 aa13.19□□□□□ -0.3
COL3A1-206ENST00000487010 EML1O00423 815 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms