RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.54□□□□□ -0.88
XRN1-212ENST00000486211 LAMTOR5O43504 91 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 CXCL14O95715 111 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 MARK3P27448 753 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 TCF7P36402 384 aaPredicted RBP9.54□□□□□ -0.88
XRN1-212ENST00000486211 CSTF1Q05048 431 aaKnown RBP9.54□□□□□ -0.88
XRN1-212ENST00000486211 SPEM2Q0P670 501 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 FOXC1Q12948 553 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 NFX1Q12986 1120 aaKnown RBP9.54□□□□□ -0.88
XRN1-212ENST00000486211 RRP12Q5JTH9 1297 aaKnown RBP9.54□□□□□ -0.88
XRN1-212ENST00000486211 VPS53Q5VIR6 699 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 TSHZ3Q63HK5 1081 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 DCLRE1AQ6PJP8 1040 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 FAM43BQ6ZT52 329 aaPredicted RBP9.54□□□□□ -0.88
XRN1-212ENST00000486211 CABP7Q86V35 215 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 LRRC43Q8N309 656 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 TMEM40Q8WWA1 233 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 AUTS2Q8WXX7 1259 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 GLG1Q92896 1179 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 DDX23Q9BUQ8 820 aaKnown RBP9.54□□□□□ -0.88
XRN1-212ENST00000486211 ZBP1Q9H171 429 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 ELAC1Q9H777 363 aaKnown RBP9.54□□□□□ -0.88
XRN1-212ENST00000486211 ATP6V0A4Q9HBG4 840 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 SLC2A4RGQ9NR83 387 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 SPATA6Q9NWH7 488 aaPredicted RBP9.54□□□□□ -0.88
XRN1-212ENST00000486211 ERAP1Q9NZ08 941 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 EPS15L1Q9UBC2 864 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 NOC2LQ9Y3T9 749 aaKnown RBP9.54□□□□□ -0.88
XRN1-212ENST00000486211 PCDHA1Q9Y5I3 950 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 MIA3Q5JRA6 1907 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 LAMA4Q16363 1823 aa9.54□□□□□ -0.88
XRN1-212ENST00000486211 DOCK8Q8NF50 2099 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.53□□□□□ -0.88
XRN1-212ENST00000486211 GSTTP1A0A1W2PQM5 241 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 DENND3A2RUS2 1198 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 C1QTNF9BB2RNN3 333 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 M0QZ92 97 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 FIBPO43427 364 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 SMARCA5O60264 1052 aaPredicted RBP9.53□□□□□ -0.88
XRN1-212ENST00000486211 HMMRO75330 724 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 C1QTNF9P0C862 333 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 INSRRP14616 1297 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 RPIAP49247 311 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 IGBP1P78318 339 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 DSC3Q14574 896 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 WTAPQ15007 396 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 NONOQ15233 471 aaKnown RBP eCLIP9.53□□□□□ -0.88
XRN1-212ENST00000486211 PTPN14Q15678 1187 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 GNPTABQ3T906 1256 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 C15orf39Q6ZRI6 1047 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 SAMD3Q8N6K7 520 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 KDF1Q8NAX2 398 aaPredicted RBP9.53□□□□□ -0.88
XRN1-212ENST00000486211 NXPE3Q969Y0 559 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 MYADMQ96S97 322 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 SENP7Q9BQF6 1050 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 AMNQ9BXJ7 453 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 TOMM22Q9NS69 142 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 GMEB2Q9UKD1 530 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 PCDHA2Q9Y5H9 948 aa9.53□□□□□ -0.88
XRN1-212ENST00000486211 CNOT1A5YKK6 2376 aaKnown RBP9.53□□□□□ -0.88
XRN1-212ENST00000486211 RRN3P2A6NIE6 340 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 ANHXE9PGG2 379 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 LRP3O75074 770 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 STAM2O75886 525 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 CD2BP2O95400 341 aaKnown RBP9.52□□□□□ -0.89
XRN1-212ENST00000486211 CTSAP10619 480 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 KRT76Q01546 638 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 FUT2Q10981 343 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 ALX1Q15699 326 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 LRSAM1Q6UWE0 723 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 FCHSD1Q86WN1 690 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 TMEM173Q86WV6 379 aaPredicted RBP9.52□□□□□ -0.89
XRN1-212ENST00000486211 VPS52Q8N1B4 723 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 TRAPPC12Q8WVT3 735 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 MTMR8Q96EF0 704 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 BCO2Q9BYV7 579 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 VAT1LQ9HCJ6 419 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 WDR6Q9NNW5 1121 aaKnown RBP9.52□□□□□ -0.89
XRN1-212ENST00000486211 PRMT8Q9NR22 394 aaPredicted RBP9.52□□□□□ -0.89
XRN1-212ENST00000486211 RTEL1Q9NZ71 1219 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 PKD2L1Q9P0L9 805 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 ST3GAL5Q9UNP4 418 aa9.52□□□□□ -0.89
XRN1-212ENST00000486211 MTF2Q9Y483 593 aaPredicted RBP9.52□□□□□ -0.89
XRN1-212ENST00000486211 FLNBO75369 2602 aaKnown RBP9.51□□□□□ -0.89
XRN1-212ENST00000486211 SMIM35A0A1B0GVV1 85 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 KANSL1LA0AUZ9 987 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 NT5C1B-RDH14C9J2C7 533 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 TM4SF5O14894 197 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 RPS6KA5O75582 802 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 TDGF1P13385 188 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 GBP2P32456 591 aaPredicted RBP9.51□□□□□ -0.89
XRN1-212ENST00000486211 CA8P35219 290 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 GCGRP47871 477 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 CLCN4P51793 760 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 HTR4Q13639 388 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 ASPRV1Q53RT3 343 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 CLLU1OSQ5K130 101 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 TSSK4Q6SA08 328 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 UNQ6494/PRO21346Q6UXR6 183 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 PRR23CQ6ZRP0 262 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms