RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 GUCY1A3Q02108 690 aa19.03■□□□□ 0.64
TNXB-205ENST00000486148 SF3B2Q13435 895 aaKnown RBP19.03■□□□□ 0.64
TNXB-205ENST00000486148 ODR4Q5SWX8 454 aa19.03■□□□□ 0.64
TNXB-205ENST00000486148 SYCE1Q8N0S2 351 aa19.03■□□□□ 0.64
TNXB-205ENST00000486148 EIF1ADQ8N9N8 165 aaKnown RBP19.03■□□□□ 0.64
TNXB-205ENST00000486148 OR2W6PQ8NHA6 318 aa19.03■□□□□ 0.64
TNXB-205ENST00000486148 INTS2Q9H0H0 1204 aaKnown RBP19.03■□□□□ 0.64
TNXB-205ENST00000486148 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.03■□□□□ 0.64
TNXB-205ENST00000486148 ZEB2O60315 1214 aa19.03■□□□□ 0.64
TNXB-205ENST00000486148 ABCB4P21439 1286 aa19.03■□□□□ 0.64
TNXB-205ENST00000486148 BRD2P25440 801 aaKnown RBP19.03■□□□□ 0.64
TNXB-205ENST00000486148 FLT3P36888 993 aa19.03■□□□□ 0.64
TNXB-205ENST00000486148 FNTAP49354 379 aa19.03■□□□□ 0.64
TNXB-205ENST00000486148 CEP55Q53EZ4 464 aa19.03■□□□□ 0.64
TNXB-205ENST00000486148 CC2D2BQ6DHV5 1058 aa19.03■□□□□ 0.64
TNXB-205ENST00000486148 HS2ST1Q7LGA3 356 aa19.03■□□□□ 0.64
TNXB-205ENST00000486148 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.03■□□□□ 0.64
TNXB-205ENST00000486148 PPP1R9AQ9ULJ8 1098 aa19.03■□□□□ 0.64
TNXB-205ENST00000486148 CAPN7Q9Y6W3 813 aa19.03■□□□□ 0.64
TNXB-205ENST00000486148 TCP10L2B9ZVM9 353 aa19.02■□□□□ 0.64
TNXB-205ENST00000486148 CCDC188H7C350 402 aa19.02■□□□□ 0.64
TNXB-205ENST00000486148 LMNB1P20700 586 aa19.02■□□□□ 0.64
TNXB-205ENST00000486148 SAMD1Q6SPF0 538 aaPredicted RBP19.02■□□□□ 0.64
TNXB-205ENST00000486148 RDH13Q8NBN7 331 aa19.02■□□□□ 0.64
TNXB-205ENST00000486148 NACC1Q96RE7 527 aa19.02■□□□□ 0.64
TNXB-205ENST00000486148 ZNF577Q9BSK1 485 aa19.02■□□□□ 0.64
TNXB-205ENST00000486148 ARHGEF10LQ9HCE6 1279 aa19.02■□□□□ 0.64
TNXB-205ENST00000486148 TAS2R14Q9NYV8 317 aa19.02■□□□□ 0.64
TNXB-205ENST00000486148 AMFRQ9UKV5 643 aa19.02■□□□□ 0.64
TNXB-205ENST00000486148 FRMD4BQ9Y2L6 1034 aa19.02■□□□□ 0.64
TNXB-205ENST00000486148 NCANO14594 1321 aa19.02■□□□□ 0.64
TNXB-205ENST00000486148 H0YGN5 161 aa19.02■□□□□ 0.63
TNXB-205ENST00000486148 SCP2P22307 547 aa19.02■□□□□ 0.63
TNXB-205ENST00000486148 PALB2Q86YC2 1186 aa19.02■□□□□ 0.63
TNXB-205ENST00000486148 ARHGEF26Q96DR7 871 aa19.02■□□□□ 0.63
TNXB-205ENST00000486148 CELF4Q9BZC1 486 aaKnown RBP19.02■□□□□ 0.63
TNXB-205ENST00000486148 SEL1LQ9UBV2 794 aa19.02■□□□□ 0.63
TNXB-205ENST00000486148 TMX2Q9Y320 296 aa19.02■□□□□ 0.63
TNXB-205ENST00000486148 NR2E1Q9Y466 385 aa19.02■□□□□ 0.63
TNXB-205ENST00000486148 NFS1Q9Y697 457 aa19.02■□□□□ 0.63
TNXB-205ENST00000486148 TTI1O43156 1089 aa19.01■□□□□ 0.63
TNXB-205ENST00000486148 DAPK3O43293 454 aa19.01■□□□□ 0.63
TNXB-205ENST00000486148 VIL1P09327 827 aaKnown RBP19.01■□□□□ 0.63
TNXB-205ENST00000486148 TMEM253P0C7T8 217 aa19.01■□□□□ 0.63
TNXB-205ENST00000486148 PPATQ06203 517 aa19.01■□□□□ 0.63
TNXB-205ENST00000486148 PLS1Q14651 629 aa19.01■□□□□ 0.63
TNXB-205ENST00000486148 ARHGAP44Q17R89 818 aa19.01■□□□□ 0.63
TNXB-205ENST00000486148 EMC10Q5UCC4 262 aa19.01■□□□□ 0.63
TNXB-205ENST00000486148 DCAF12L1Q5VU92 463 aa19.01■□□□□ 0.63
TNXB-205ENST00000486148 RFFLQ8WZ73 363 aa19.01■□□□□ 0.63
TNXB-205ENST00000486148 TMBIM4Q9HC24 238 aa19.01■□□□□ 0.63
TNXB-205ENST00000486148 APEX2Q9UBZ4 518 aa19.01■□□□□ 0.63
TNXB-205ENST00000486148 UBE4BO95155 1302 aa19.01■□□□□ 0.63
TNXB-205ENST00000486148 ZYXQ15942 572 aaKnown RBP19.01■□□□□ 0.63
TNXB-205ENST00000486148 C1orf131Q8NDD1 294 aaKnown RBP19.01■□□□□ 0.63
TNXB-205ENST00000486148 LXNQ9BS40 222 aa19.01■□□□□ 0.63
TNXB-205ENST00000486148 RANBP17Q9H2T7 1088 aaKnown RBP19.01■□□□□ 0.63
TNXB-205ENST00000486148 A1CFQ9NQ94 594 aaKnown RBP19.01■□□□□ 0.63
TNXB-205ENST00000486148 SYNPO2Q9UMS6 1093 aa19.01■□□□□ 0.63
TNXB-205ENST00000486148 BCS1LQ9Y276 419 aa19.01■□□□□ 0.63
TNXB-205ENST00000486148 A6NNZ2 444 aa19■□□□□ 0.63
TNXB-205ENST00000486148 DDX3YO15523 660 aaKnown RBP19■□□□□ 0.63
TNXB-205ENST00000486148 FGGP02679 453 aa19■□□□□ 0.63
TNXB-205ENST00000486148 CHRNA5P30532 468 aa19■□□□□ 0.63
TNXB-205ENST00000486148 LSP1P33241 339 aa19■□□□□ 0.63
TNXB-205ENST00000486148 MYL7Q01449 175 aa19■□□□□ 0.63
TNXB-205ENST00000486148 MAPK7Q13164 816 aa19■□□□□ 0.63
TNXB-205ENST00000486148 ITGB3BPQ13352 177 aaPredicted RBP19■□□□□ 0.63
TNXB-205ENST00000486148 TUBB8Q3ZCM7 444 aa19■□□□□ 0.63
TNXB-205ENST00000486148 PHLDB3Q6NSJ2 640 aa19■□□□□ 0.63
TNXB-205ENST00000486148 RPAINQ86UA6 219 aa19■□□□□ 0.63
TNXB-205ENST00000486148 DAW1Q8N136 415 aa19■□□□□ 0.63
TNXB-205ENST00000486148 HOOK2Q96ED9 719 aa19■□□□□ 0.63
TNXB-205ENST00000486148 CD248Q9HCU0 757 aa19■□□□□ 0.63
TNXB-205ENST00000486148 ODF2LQ9ULJ1 636 aa19■□□□□ 0.63
TNXB-205ENST00000486148 CLRN2A0PK11 232 aa19■□□□□ 0.63
TNXB-205ENST00000486148 YDJCA8MPS7 323 aa19■□□□□ 0.63
TNXB-205ENST00000486148 HMGB1P1B2RPK0 211 aaPredicted RBP19■□□□□ 0.63
TNXB-205ENST00000486148 NDUFAB1O14561 156 aa19■□□□□ 0.63
TNXB-205ENST00000486148 HIP1RO75146 1068 aa19■□□□□ 0.63
TNXB-205ENST00000486148 NAA35Q5VZE5 725 aa19■□□□□ 0.63
TNXB-205ENST00000486148 LRIG3Q6UXM1 1119 aa19■□□□□ 0.63
TNXB-205ENST00000486148 CABS1Q96KC9 395 aa19■□□□□ 0.63
TNXB-205ENST00000486148 THAP2Q9H0W7 228 aa19■□□□□ 0.63
TNXB-205ENST00000486148 SLITRK6Q9H5Y7 841 aa19■□□□□ 0.63
TNXB-205ENST00000486148 HERC5Q9UII4 1024 aaKnown RBP19■□□□□ 0.63
TNXB-205ENST00000486148 MYH11P35749 1972 aa18.99■□□□□ 0.63
TNXB-205ENST00000486148 DDX39AO00148 427 aaKnown RBP18.99■□□□□ 0.63
TNXB-205ENST00000486148 EXOC3O60645 756 aa18.99■□□□□ 0.63
TNXB-205ENST00000486148 LRRN2O75325 713 aa18.99■□□□□ 0.63
TNXB-205ENST00000486148 BFSP1Q12934 665 aa18.99■□□□□ 0.63
TNXB-205ENST00000486148 PPP2R5AQ15172 486 aa18.99■□□□□ 0.63
TNXB-205ENST00000486148 B3GNT9Q6UX72 402 aa18.99■□□□□ 0.63
TNXB-205ENST00000486148 STXBP4Q6ZWJ1 553 aa18.99■□□□□ 0.63
TNXB-205ENST00000486148 MAEAQ7L5Y9 396 aa18.99■□□□□ 0.63
TNXB-205ENST00000486148 CTNNBL1Q8WYA6 563 aaPredicted RBP18.99■□□□□ 0.63
TNXB-205ENST00000486148 STRA6Q9BX79 667 aa18.99■□□□□ 0.63
TNXB-205ENST00000486148 CENPHQ9H3R5 247 aa18.99■□□□□ 0.63
TNXB-205ENST00000486148 GOPCQ9HD26 462 aa18.99■□□□□ 0.63
TNXB-205ENST00000486148 SEPT11Q9NVA2 429 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms